Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077123
CDS Infomation

pacid=37465367 polypeptide=PGSC0003DMP400052255 locus=PGSC0003DMG400029993 ID=PGSC0003DMT400077123.v4.03 annot-version=v4.03
Sequence

ATGGATGGATATGAAGCTACAAAGATAGTTTTATCAAGAATTCAAAGTTTGGATCCAGAA
AATGCTTCAAAAATCATGGGGTATATACTGATACAAGACCAAGGGGAGAAGGAGATGATA
AGATTAGCTTTTGGTCCAGAAACCCTTTTGGTTTCTTTGATAAATCAAGCTAAAACTTGT
TTAGGACTTTCATCAAACAGTTCCTCTGCAATGTCAAATGCTTCAAAATTGAATCTTTTT
CATCATTCTTCACCAAGAATCATGATTCCTAACAATGGGTTTCCTTCTTCTTCACCTTCT
TCACCTTCTCCTTGGTCTACTAGTGGGTCACCAGTTTTTACAAGAAGCCCTAGACCAATG
GCTTCACCAGTAGGAGGAGGAGGGGCTAGTTCACTTTCTTATGCTGCTGTTGTGAATGGT
TCTACTAATTCTGTTTCTGGGTCTTCAACTCCTTCACTTTCACTCCCTTTTTATGACCCA
AATAATGATGAGTATGGTAGTAGTGTTCAAGCTCAAGTTCAAGAACACTTGTCTTTTCTT
GATGAATCCATGGATCCAATTATGAGTCCTAGTGGAAGAAGTGATTCTTTGGTTTTCCCT
TATGGGAATTGTGAGGAAACCCCTCATCTTCATCGTAGGAGTTGTTCAGTCAATGATGTT
TTTCTTGGTGGTTCAGATGATGGTGGTGGTGGTGGTGGGGGGTTTGGTTGGAGGCCTTGC
ATGTATTTTGCTAGAGGGTTTTGCAAGAATGGGAATAGTTGCAAGTTTATGCATAGTGGC
TTTCCTGATTCTTCTTCTTCACCAGATGCTATTGTTGGTTCTCCTAGTAAAGTTGACTCT
GTTGATGATTTCTTGAGGATGAAGGCCTTACAACAGCAGCAGCAGCAACAGAGGTTTGCT
GCTGCCTCTCTTATGGCTTCTGGTGCTCATCATCATCCAATTGCTTACAACAAATGCATC
AACATCTTGAATGATAACCAAAGATCAGCTGCTGCAGCATTTATGATGGGTGAAGAATTC
CACAAATTTGGTAGGTGCCGGCCTGATAGAAATGATTTTTCAGCAATGGCGTTGGGTGGT
ATCTCAAGTTCAAGTTCACGACAAATTTACCTAACATTTCCTGCTGATAGCACATTTAAG
GAGGAGGATGTGTCTAATTACTTTAGTATGTATGGGCCTGTCCAAGATGTTAGAATTCCA
TATCAGCAGAAGCGAATGTTTGGATTCGTCACGTTTGTCTACTCAGAAACTGTTAAGATG
ATCTTGGCTAAAGGAAACCCACATTTTGTGTGTGATTCTCGGGTACTTGTAAAGCCCTAC
AAGGAAAAGGGAAAAATCGCAGACAAGAAGCAACTTCAGCAACAACAACAACATCCAATT
GATAGAGGAGAGCTGTCGACCTGTTTAAGCCCATCAGCTCTTGAATCTAGGGATCCATAC
GACCTTCCTTTTGGAGCAAGAATGTTATATAATTCACATGAGATGATGTTGAGAAGAAAA
ATAGAGCAGGACGCTGAATTACAGCAAGCCATTGAACTTCAAGGCAGAAGACTAATGAAT
TTGCAACTGCTGGACCTGAAGAATCAACATCGTAATGATCACTTTCCACCCAGCCTCTCT
CCTGGTCTTCCGATGGCCTCCCAGATGCAGTTTCACTCTCAAAACAATCACAATATTGTT
CCTGTATTGAATGACATTGATCAAGAAGTCCCTTCAGAAAGTAACGATACTCATGAAGTT
ACCAAGGCCCCCCATAATGCAGCTGATGAGAAGGTGCCTCAAGAAATGCTTCCTACTGAT
TTTGGGAATGCAAGTAGCAGCAAGGAGCATACCACCAATATTGACAACTCTAATCTTCAA
GAAAGCTTGGAGCACATCCTTCCCGATAACCTTTTTGCTTCTCCTACAAAATCAGCTGCA
GAAAACCAGGCTGCATTCTCCACTGATTCAGCTGAAGCTGGCATTAGTTCCCCAATAACT
ACTGCTACTTCTAACAATAATATCCCTATGCTTCCTACAACGACTACCCTCAACATGGCT
TCTCTTAAATCATGTTACTTCCACATGCCAAGGTTTACTTCTGGGCAAGAAGCCATTGAA
ATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400052255
PEP Infomation

pacid=37465367 transcript=PGSC0003DMT400077123 locus=PGSC0003DMG400029993 ID=PGSC0003DMT400077123.v4.03 annot-version=v4.03
Sequence

MDGYEATKIVLSRIQSLDPENASKIMGYILIQDQGEKEMIRLAFGPETLLVSLINQAKTC
LGLSSNSSSAMSNASKLNLFHHSSPRIMIPNNGFPSSSPSSPSPWSTSGSPVFTRSPRPM
ASPVGGGGASSLSYAAVVNGSTNSVSGSSTPSLSLPFYDPNNDEYGSSVQAQVQEHLSFL
DESMDPIMSPSGRSDSLVFPYGNCEETPHLHRRSCSVNDVFLGGSDDGGGGGGGFGWRPC
MYFARGFCKNGNSCKFMHSGFPDSSSSPDAIVGSPSKVDSVDDFLRMKALQQQQQQQRFA
AASLMASGAHHHPIAYNKCINILNDNQRSAAAAFMMGEEFHKFGRCRPDRNDFSAMALGG
ISSSSSRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFVYSETVKM
ILAKGNPHFVCDSRVLVKPYKEKGKIADKKQLQQQQQHPIDRGELSTCLSPSALESRDPY
DLPFGARMLYNSHEMMLRRKIEQDAELQQAIELQGRRLMNLQLLDLKNQHRNDHFPPSLS
PGLPMASQMQFHSQNNHNIVPVLNDIDQEVPSESNDTHEVTKAPHNAADEKVPQEMLPTD
FGNASSSKEHTTNIDNSNLQESLEHILPDNLFASPTKSAAENQAAFSTDSAEAGISSPIT
TATSNNNIPMLPTTTTLNMASLKSCYFHMPRFTSGQEAIEM*

Transcript Sequence

Transcript ID

PGSC0003DMT400077123
Transcript Infomation

pacid=37465367 locus=PGSC0003DMG400029993 ID=PGSC0003DMT400077123.v4.03 annot-version=v4.03
Sequence

ATGGATGGATATGAAGCTACAAAGATAGTTTTATCAAGAATTCAAAGTTTGGATCCAGAA
AATGCTTCAAAAATCATGGGGTATATACTGATACAAGACCAAGGGGAGAAGGAGATGATA
AGATTAGCTTTTGGTCCAGAAACCCTTTTGGTTTCTTTGATAAATCAAGCTAAAACTTGT
TTAGGACTTTCATCAAACAGTTCCTCTGCAATGTCAAATGCTTCAAAATTGAATCTTTTT
CATCATTCTTCACCAAGAATCATGATTCCTAACAATGGGTTTCCTTCTTCTTCACCTTCT
TCACCTTCTCCTTGGTCTACTAGTGGGTCACCAGTTTTTACAAGAAGCCCTAGACCAATG
GCTTCACCAGTAGGAGGAGGAGGGGCTAGTTCACTTTCTTATGCTGCTGTTGTGAATGGT
TCTACTAATTCTGTTTCTGGGTCTTCAACTCCTTCACTTTCACTCCCTTTTTATGACCCA
AATAATGATGAGTATGGTAGTAGTGTTCAAGCTCAAGTTCAAGAACACTTGTCTTTTCTT
GATGAATCCATGGATCCAATTATGAGTCCTAGTGGAAGAAGTGATTCTTTGGTTTTCCCT
TATGGGAATTGTGAGGAAACCCCTCATCTTCATCGTAGGAGTTGTTCAGTCAATGATGTT
TTTCTTGGTGGTTCAGATGATGGTGGTGGTGGTGGTGGGGGGTTTGGTTGGAGGCCTTGC
ATGTATTTTGCTAGAGGGTTTTGCAAGAATGGGAATAGTTGCAAGTTTATGCATAGTGGC
TTTCCTGATTCTTCTTCTTCACCAGATGCTATTGTTGGTTCTCCTAGTAAAGTTGACTCT
GTTGATGATTTCTTGAGGATGAAGGCCTTACAACAGCAGCAGCAGCAACAGAGGTTTGCT
GCTGCCTCTCTTATGGCTTCTGGTGCTCATCATCATCCAATTGCTTACAACAAATGCATC
AACATCTTGAATGATAACCAAAGATCAGCTGCTGCAGCATTTATGATGGGTGAAGAATTC
CACAAATTTGGTAGGTGCCGGCCTGATAGAAATGATTTTTCAGCAATGGCGTTGGGTGGT
ATCTCAAGTTCAAGTTCACGACAAATTTACCTAACATTTCCTGCTGATAGCACATTTAAG
GAGGAGGATGTGTCTAATTACTTTAGTATGTATGGGCCTGTCCAAGATGTTAGAATTCCA
TATCAGCAGAAGCGAATGTTTGGATTCGTCACGTTTGTCTACTCAGAAACTGTTAAGATG
ATCTTGGCTAAAGGAAACCCACATTTTGTGTGTGATTCTCGGGTACTTGTAAAGCCCTAC
AAGGAAAAGGGAAAAATCGCAGACAAGAAGCAACTTCAGCAACAACAACAACATCCAATT
GATAGAGGAGAGCTGTCGACCTGTTTAAGCCCATCAGCTCTTGAATCTAGGGATCCATAC
GACCTTCCTTTTGGAGCAAGAATGTTATATAATTCACATGAGATGATGTTGAGAAGAAAA
ATAGAGCAGGACGCTGAATTACAGCAAGCCATTGAACTTCAAGGCAGAAGACTAATGAAT
TTGCAACTGCTGGACCTGAAGAATCAACATCGTAATGATCACTTTCCACCCAGCCTCTCT
CCTGGTCTTCCGATGGCCTCCCAGATGCAGTTTCACTCTCAAAACAATCACAATATTGTT
CCTGTATTGAATGACATTGATCAAGAAGTCCCTTCAGAAAGTAACGATACTCATGAAGTT
ACCAAGGCCCCCCATAATGCAGCTGATGAGAAGGTGCCTCAAGAAATGCTTCCTACTGAT
TTTGGGAATGCAAGTAGCAGCAAGGAGCATACCACCAATATTGACAACTCTAATCTTCAA
GAAAGCTTGGAGCACATCCTTCCCGATAACCTTTTTGCTTCTCCTACAAAATCAGCTGCA
GAAAACCAGGCTGCATTCTCCACTGATTCAGCTGAAGCTGGCATTAGTTCCCCAATAACT
ACTGCTACTTCTAACAATAATATCCCTATGCTTCCTACAACGACTACCCTCAACATGGCT
TCTCTTAAATCATGTTACTTCCACATGCCAAGGTTTACTTCTGGGCAAGAAGCCATTGAA
ATGTAG