Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077106
CDS Infomation

pacid=37464311 polypeptide=PGSC0003DMP400052248 locus=PGSC0003DMG400029989 ID=PGSC0003DMT400077106.v4.03 annot-version=v4.03
Sequence

ATGGAGATAGAGGTGACAAGTAGTAGTAGTGATATTGAAAAAGGTGTAATCCATAGTCAA
GGTGTTGCATATTTAGTATGGGAAGATTTAACAGTAATGTTGCCAAATTTTGGACAAGGA
CCAACTAAGAAGTTGTTACATGGATTAAGTGGTTATGCTGAACCTGGTAGAATTATGGCT
ATTATGGGTCCTTCTGGTTCTGGAAAATCTACCCTTCTCGATACGTTAGCAGGTAGACTG
TCGACTAATGTCGTAATGACTGGAAATATCCTTCTCAATGGGAAGAAGAGGAGGTTGGAC
TATGGTGTTGTTGCTTATGTTACTCAAGAGGATACACTGTTGGGAACTCTAACACCTAGA
GAAACAATAATGTATTCAGCACATCTTCGACTTCCAACAAGCATGACAAAAGAAGAGGTA
GACGATATTGTGGAGGGAACAATAATGGAAATGGGGCTAGGAGATTGTGCTGATCGGCTT
GTAGGAAATTGGCAAGTAAGAGGAATAAGTGGTGGGGAGAAAAAGAGATTGGGCATTGCA
CTTGAAATCCTTGTACGACCTCGTATACTTTTTCTTGATGAACCTACCACTGGTCTTGAC
AGTGCCTCAGCATTCTTTGTTGTCCAAGCTCTTAAGAATATTTCACGCGATGGAAGAACA
GTTATCTCGTCAATTCATCAGCCTAGTAGTGAAGTTTTCGCCTTGTTTGATGACCTCTTT
CTGTTGTCTGGTGGAGAGGCTGTATATTTTGGAGAAGCACAATTGGCAGTACAGTTCTTT
GCTGAATCTGGATTTCCTTGTCCAAGTAGGAGAAATCCATCTGATCATTTCCTACGTTGT
GTTAATTCGGACTTTGATGTCGTTACAGCCACACTGAAAGGATCACAAAGACTCCGGGAG
ACACATAAAAGTGACTACTTAATGAACATGGCAACAGCAGAAATAAAAGAACTGCTTGCA
AGCAAATATAAGCACTCACCATACGCAACGAGGGCCAGGTCACGGATGCGAGAACTCTTA
GCCACTCAAGGTGTTGAGATTGAGATAGTAAAAGGAAGTCAAGCTGGTTGGGGAAAGCAA
CTTTTGACATTGACGCGGAGATCATTTGTAAACATGTCAAGAGACAAGGGATATTATTGG
TCTCGTATAGTAATTTATATTATTGTAGCTTTTGCCGTTGGTACCCTCTTCTATGATGTT
GGCACCAGTTACACAGCAATCTTGGCTCGGGGAGCTTGTGGTGGATTTGTCACCGGCTAC
ATGACTTTCATGTCCATTGGTGGCTTTCCATCCTTCATAGAAGAAATGAAGGTTTTTACC
AAAGAAAGGCTTAACGGGCACTATGGTGTTGCAGCTTTCGTATTGGCAAACTTCCTCTCA
TCATTTCCATTTTTAGTTGCAGTTTCACTCCTCACTGGAACCATCACCTATTACATGGTG
TTTCGGGCTAGATTCTTCCGTTATGTGTTTTTCTGCTTAAATCTTTTTGGTTGTATCGCT
GTTGTTGAGAGTTGCATGATGATTGTAGCTTCACTTGTTCCAAACTTCTTAATGGGAATC
ATAACAGGAGCTGGTGTGCTTGGAATCATGATGATGACTGCTGGATTCTTCCGTTTACTG
CCAGATCTTCCCAAGCCAATTTGGCGCTATCCAATTTCATTTATTGGCTACGGGGCATGG
GGTTTACAGGGATCATACAAAAATGACATGATTGGACTTGAATTTGATCCACTAATTCCT
GGCGGAGAGAAACTAACAGGGGAATATGTGATCACGAACATGTTCAAATTGTCGTTGGAT
CACTCCAAATGGTGGGATTTACTTGCATTATACTCCCTCATCGTGATGTACAGGCTTCTA
TTCTTTATAATTCTCAAGCTAAAAGAACGAGCTACACCATTTTTCCGATCAATGTATGCA
AAGAGAACGATGCATAAACTCAAAAGGCGTCCGTCATTCAAGAGGAAACCATCTTTATCC
TATTCAAAAAGACAACATGCTCTCAGGTCATTGTCTTCTCAAGAGGGTCTTAGTTCTCCA
ATCCCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400052248
PEP Infomation

pacid=37464311 transcript=PGSC0003DMT400077106 locus=PGSC0003DMG400029989 ID=PGSC0003DMT400077106.v4.03 annot-version=v4.03
Sequence

MEIEVTSSSSDIEKGVIHSQGVAYLVWEDLTVMLPNFGQGPTKKLLHGLSGYAEPGRIMA
IMGPSGSGKSTLLDTLAGRLSTNVVMTGNILLNGKKRRLDYGVVAYVTQEDTLLGTLTPR
ETIMYSAHLRLPTSMTKEEVDDIVEGTIMEMGLGDCADRLVGNWQVRGISGGEKKRLGIA
LEILVRPRILFLDEPTTGLDSASAFFVVQALKNISRDGRTVISSIHQPSSEVFALFDDLF
LLSGGEAVYFGEAQLAVQFFAESGFPCPSRRNPSDHFLRCVNSDFDVVTATLKGSQRLRE
THKSDYLMNMATAEIKELLASKYKHSPYATRARSRMRELLATQGVEIEIVKGSQAGWGKQ
LLTLTRRSFVNMSRDKGYYWSRIVIYIIVAFAVGTLFYDVGTSYTAILARGACGGFVTGY
MTFMSIGGFPSFIEEMKVFTKERLNGHYGVAAFVLANFLSSFPFLVAVSLLTGTITYYMV
FRARFFRYVFFCLNLFGCIAVVESCMMIVASLVPNFLMGIITGAGVLGIMMMTAGFFRLL
PDLPKPIWRYPISFIGYGAWGLQGSYKNDMIGLEFDPLIPGGEKLTGEYVITNMFKLSLD
HSKWWDLLALYSLIVMYRLLFFIILKLKERATPFFRSMYAKRTMHKLKRRPSFKRKPSLS
YSKRQHALRSLSSQEGLSSPIP*

Transcript Sequence

Transcript ID

PGSC0003DMT400077106
Transcript Infomation

pacid=37464311 locus=PGSC0003DMG400029989 ID=PGSC0003DMT400077106.v4.03 annot-version=v4.03
Sequence

ATGGAGATAGAGGTGACAAGTAGTAGTAGTGATATTGAAAAAGGTGTAATCCATAGTCAA
GGTGTTGCATATTTAGTATGGGAAGATTTAACAGTAATGTTGCCAAATTTTGGACAAGGA
CCAACTAAGAAGTTGTTACATGGATTAAGTGGTTATGCTGAACCTGGTAGAATTATGGCT
ATTATGGGTCCTTCTGGTTCTGGAAAATCTACCCTTCTCGATACGTTAGCAGGTAGACTG
TCGACTAATGTCGTAATGACTGGAAATATCCTTCTCAATGGGAAGAAGAGGAGGTTGGAC
TATGGTGTTGTTGCTTATGTTACTCAAGAGGATACACTGTTGGGAACTCTAACACCTAGA
GAAACAATAATGTATTCAGCACATCTTCGACTTCCAACAAGCATGACAAAAGAAGAGGTA
GACGATATTGTGGAGGGAACAATAATGGAAATGGGGCTAGGAGATTGTGCTGATCGGCTT
GTAGGAAATTGGCAAGTAAGAGGAATAAGTGGTGGGGAGAAAAAGAGATTGGGCATTGCA
CTTGAAATCCTTGTACGACCTCGTATACTTTTTCTTGATGAACCTACCACTGGTCTTGAC
AGTGCCTCAGCATTCTTTGTTGTCCAAGCTCTTAAGAATATTTCACGCGATGGAAGAACA
GTTATCTCGTCAATTCATCAGCCTAGTAGTGAAGTTTTCGCCTTGTTTGATGACCTCTTT
CTGTTGTCTGGTGGAGAGGCTGTATATTTTGGAGAAGCACAATTGGCAGTACAGTTCTTT
GCTGAATCTGGATTTCCTTGTCCAAGTAGGAGAAATCCATCTGATCATTTCCTACGTTGT
GTTAATTCGGACTTTGATGTCGTTACAGCCACACTGAAAGGATCACAAAGACTCCGGGAG
ACACATAAAAGTGACTACTTAATGAACATGGCAACAGCAGAAATAAAAGAACTGCTTGCA
AGCAAATATAAGCACTCACCATACGCAACGAGGGCCAGGTCACGGATGCGAGAACTCTTA
GCCACTCAAGGTGTTGAGATTGAGATAGTAAAAGGAAGTCAAGCTGGTTGGGGAAAGCAA
CTTTTGACATTGACGCGGAGATCATTTGTAAACATGTCAAGAGACAAGGGATATTATTGG
TCTCGTATAGTAATTTATATTATTGTAGCTTTTGCCGTTGGTACCCTCTTCTATGATGTT
GGCACCAGTTACACAGCAATCTTGGCTCGGGGAGCTTGTGGTGGATTTGTCACCGGCTAC
ATGACTTTCATGTCCATTGGTGGCTTTCCATCCTTCATAGAAGAAATGAAGGTTTTTACC
AAAGAAAGGCTTAACGGGCACTATGGTGTTGCAGCTTTCGTATTGGCAAACTTCCTCTCA
TCATTTCCATTTTTAGTTGCAGTTTCACTCCTCACTGGAACCATCACCTATTACATGGTG
TTTCGGGCTAGATTCTTCCGTTATGTGTTTTTCTGCTTAAATCTTTTTGGTTGTATCGCT
GTTGTTGAGAGTTGCATGATGATTGTAGCTTCACTTGTTCCAAACTTCTTAATGGGAATC
ATAACAGGAGCTGGTGTGCTTGGAATCATGATGATGACTGCTGGATTCTTCCGTTTACTG
CCAGATCTTCCCAAGCCAATTTGGCGCTATCCAATTTCATTTATTGGCTACGGGGCATGG
GGTTTACAGGGATCATACAAAAATGACATGATTGGACTTGAATTTGATCCACTAATTCCT
GGCGGAGAGAAACTAACAGGGGAATATGTGATCACGAACATGTTCAAATTGTCGTTGGAT
CACTCCAAATGGTGGGATTTACTTGCATTATACTCCCTCATCGTGATGTACAGGCTTCTA
TTCTTTATAATTCTCAAGCTAAAAGAACGAGCTACACCATTTTTCCGATCAATGTATGCA
AAGAGAACGATGCATAAACTCAAAAGGCGTCCGTCATTCAAGAGGAAACCATCTTTATCC
TATTCAAAAAGACAACATGCTCTCAGGTCATTGTCTTCTCAAGAGGGTCTTAGTTCTCCA
ATCCCATAG