Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077095
CDS Infomation

pacid=37467325 polypeptide=PGSC0003DMP400052241 locus=PGSC0003DMG400029985 ID=PGSC0003DMT400077095.v4.03 annot-version=v4.03
Sequence

ATGGAAGGGGTTCTGGAAATCTTGAAGTCTGTTCCTGGATCAAGCAACATTACTGATAAT
GTTGTACTAAAGGGCTTCTTGGATCATGGGTATACAAATGAAGCATTGGATGTCTTCTCA
AGGATGTTGTCTGAGGGCTCAGTGGGGGACAAAATCAGTTATGTGAATATATTTGGTCTT
TGTGCTCGTCTCAAGGATTTGAAATTGGGTCAGCAAGTTCATTGCAGAATGTTGAAGTCA
GGTCTTCAGCTTGATGTGTTTTTAAGCAGTGCAGTCATGGACATGTACGGAAAGTGTGGT
GAAATTTCAGGTGCAAGATATATCTTTTATTCTTATCCTGACCATAATGTGGTGTCTTGG
ACAACAATCTTGGCTGCAAATTTCCAAAATGAGTGCTTTGAGGAAGCCCTGAAAATGTTC
TTACAAATGGAACTTCAGGATGTTGTGCCAAATGAATACACATTTGCAGTATTGTTGCAT
TCTTGTGCGGGTCTATCAGCACTTGGGTGCGGGAAAACATTACATGCACGTGTTGAGAAG
ACAGGACATGGAACTTTTGTCGTAGTGGGGAATGCTCTAATTAATATGTATGTTAGGAGT
GGCCATATTGAAGCCGCTAGGGCCTTATTTTCAAACATGATATGTCGAGATACTGTTACT
TGGAATTTGATAATATCAGGTTTCTCTCATCATGGGCTTGGTGAGGACGCATTGTATATG
TTTCAGGACATGTTAGCTGCCAAAGAGCAACCAAGCTATGTAACCTTTATTGGGGTTCTT
TTGGCTTGTGGACATTTGGGTAGGATAGAAGAAGGATTTTACTACTTACAGCATCTAATG
AGGGACTTTGGCCTTGAACCTGGGTTGGAGCACTATACCTGTGTTGTAGGGCTCCTAGGT
AAAGCTGGGAAACTTGATGAGGCTGAGAAGTTCATGAGGTCGACGCCAATCACATGGGAT
GTTATTGCTTGGCGTACTTTGCTAAATGCTTGTAACGTCCACCGCAATTATGGTTTAGGA
CAGAAAGTGGCAGACCATTTGTTACAATTGAACCCCAACGACGTGGGAACCTATATCTTG
TTGTCCAATATGCATGCCAAGGTGAAAAGGTGGGATGGTGTAGCAAAGATGCGGAAGTTA
TTAAGAGAAAGGAACATAAAGAAAGAACCAGGATTGAGCTGGACTGAAATACGAAATGAA
ACTCATATGTTTGTTTCTGATGACACTCAACACCCAGAAACAGCTCAAATCCATGAGAAG
GTGAGAAAATTGTTGGCTGAAATAAAACCATTGGGTTATATTCCAGACACGGCTTCTGTC
TTGCATGATGTTGAGCAAGAACAACAAGAGGGTTATCTTAGTTACCACAGCGAAAAGCTG
GCTGTTGCATATGCTCTCATGAAAACACCATCCCAAGCACCAATTCATGTTATTAAGAAT
CTCAGGATATGCGATGATTGCCATTCTGCTTTGAAGCTTATCTCGAAGGTGACAATGAGA
GTGATAGTTGTAAGAGATGTCAATCGATTCCACAGTTTTCAAAATGGGTCCTGTTCGTGT
GCAGATTATTGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052241
PEP Infomation

pacid=37467325 transcript=PGSC0003DMT400077095 locus=PGSC0003DMG400029985 ID=PGSC0003DMT400077095.v4.03 annot-version=v4.03
Sequence

MEGVLEILKSVPGSSNITDNVVLKGFLDHGYTNEALDVFSRMLSEGSVGDKISYVNIFGL
CARLKDLKLGQQVHCRMLKSGLQLDVFLSSAVMDMYGKCGEISGARYIFYSYPDHNVVSW
TTILAANFQNECFEEALKMFLQMELQDVVPNEYTFAVLLHSCAGLSALGCGKTLHARVEK
TGHGTFVVVGNALINMYVRSGHIEAARALFSNMICRDTVTWNLIISGFSHHGLGEDALYM
FQDMLAAKEQPSYVTFIGVLLACGHLGRIEEGFYYLQHLMRDFGLEPGLEHYTCVVGLLG
KAGKLDEAEKFMRSTPITWDVIAWRTLLNACNVHRNYGLGQKVADHLLQLNPNDVGTYIL
LSNMHAKVKRWDGVAKMRKLLRERNIKKEPGLSWTEIRNETHMFVSDDTQHPETAQIHEK
VRKLLAEIKPLGYIPDTASVLHDVEQEQQEGYLSYHSEKLAVAYALMKTPSQAPIHVIKN
LRICDDCHSALKLISKVTMRVIVVRDVNRFHSFQNGSCSCADYW*

Transcript Sequence

Transcript ID

PGSC0003DMT400077095
Transcript Infomation

pacid=37467325 locus=PGSC0003DMG400029985 ID=PGSC0003DMT400077095.v4.03 annot-version=v4.03
Sequence

ATGGAAGGGGTTCTGGAAATCTTGAAGTCTGTTCCTGGATCAAGCAACATTACTGATAAT
GTTGTACTAAAGGGCTTCTTGGATCATGGGTATACAAATGAAGCATTGGATGTCTTCTCA
AGGATGTTGTCTGAGGGCTCAGTGGGGGACAAAATCAGTTATGTGAATATATTTGGTCTT
TGTGCTCGTCTCAAGGATTTGAAATTGGGTCAGCAAGTTCATTGCAGAATGTTGAAGTCA
GGTCTTCAGCTTGATGTGTTTTTAAGCAGTGCAGTCATGGACATGTACGGAAAGTGTGGT
GAAATTTCAGGTGCAAGATATATCTTTTATTCTTATCCTGACCATAATGTGGTGTCTTGG
ACAACAATCTTGGCTGCAAATTTCCAAAATGAGTGCTTTGAGGAAGCCCTGAAAATGTTC
TTACAAATGGAACTTCAGGATGTTGTGCCAAATGAATACACATTTGCAGTATTGTTGCAT
TCTTGTGCGGGTCTATCAGCACTTGGGTGCGGGAAAACATTACATGCACGTGTTGAGAAG
ACAGGACATGGAACTTTTGTCGTAGTGGGGAATGCTCTAATTAATATGTATGTTAGGAGT
GGCCATATTGAAGCCGCTAGGGCCTTATTTTCAAACATGATATGTCGAGATACTGTTACT
TGGAATTTGATAATATCAGGTTTCTCTCATCATGGGCTTGGTGAGGACGCATTGTATATG
TTTCAGGACATGTTAGCTGCCAAAGAGCAACCAAGCTATGTAACCTTTATTGGGGTTCTT
TTGGCTTGTGGACATTTGGGTAGGATAGAAGAAGGATTTTACTACTTACAGCATCTAATG
AGGGACTTTGGCCTTGAACCTGGGTTGGAGCACTATACCTGTGTTGTAGGGCTCCTAGGT
AAAGCTGGGAAACTTGATGAGGCTGAGAAGTTCATGAGGTCGACGCCAATCACATGGGAT
GTTATTGCTTGGCGTACTTTGCTAAATGCTTGTAACGTCCACCGCAATTATGGTTTAGGA
CAGAAAGTGGCAGACCATTTGTTACAATTGAACCCCAACGACGTGGGAACCTATATCTTG
TTGTCCAATATGCATGCCAAGGTGAAAAGGTGGGATGGTGTAGCAAAGATGCGGAAGTTA
TTAAGAGAAAGGAACATAAAGAAAGAACCAGGATTGAGCTGGACTGAAATACGAAATGAA
ACTCATATGTTTGTTTCTGATGACACTCAACACCCAGAAACAGCTCAAATCCATGAGAAG
GTGAGAAAATTGTTGGCTGAAATAAAACCATTGGGTTATATTCCAGACACGGCTTCTGTC
TTGCATGATGTTGAGCAAGAACAACAAGAGGGTTATCTTAGTTACCACAGCGAAAAGCTG
GCTGTTGCATATGCTCTCATGAAAACACCATCCCAAGCACCAATTCATGTTATTAAGAAT
CTCAGGATATGCGATGATTGCCATTCTGCTTTGAAGCTTATCTCGAAGGTGACAATGAGA
GTGATAGTTGTAAGAGATGTCAATCGATTCCACAGTTTTCAAAATGGGTCCTGTTCGTGT
GCAGATTATTGGTGA