Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077068
CDS Infomation

pacid=37477697 polypeptide=PGSC0003DMP400052225 locus=PGSC0003DMG400029974 ID=PGSC0003DMT400077068.v4.03 annot-version=v4.03
Sequence

ATGAGAAATCTCTTAAGCTTCTGCATTTTTTTCCTTATAGCTCTTGCAAATTTGTTTTCT
CTAACGAGAGCTGCAATCCCTGCAAAGCGCTTTTATGCTCCATTTAATCGAACTAGCTTC
CCTCCTGATTTTGTTTTTGGCGCTTCATCAGCTGCTTATCAGATCGAAGGAGAGGCGCTT
AAAGGAGGAAGAGGACCTAGTATATGGGATACTTTTACTCGCCAGCACCCAGAAAAGATC
TTTGATGCTTCTACAGCAGATGTGGCTGTTGATTTCTACCATCGCTATAAGGAAGACATT
CAACTGCTTAAGCAAGTGGGATTAAGAGCTTTCAGGATGTCTATCTCTTGGTCTCGAATT
TTACCATATGGGAAGGTTAGCAAAGGAGTGAATCCAGAAGGCATCAAATTCTATAATGAT
GTTTTCAACGAGCTAATCGCTAATGGTATAACTCCTTTTGTGACTCTATTCCATTGGGAC
ACACCACAAGCCCTTGAAGACGAATATAAAGGGTTTCTCAGCTCAAAAATAGCGAAAGAT
TATGGTGACTTTGTGGACATTTGCTTCAAAGAATTTGGGGATAGAGTAAAGCATTGGATA
ACTCTAAATGAACCACTTTCTTACAGCATGAATGGATATACAAAAGGAACCTTTGCACCA
GGAAGATGTTCTAAATATGTAGGTAATTGCACTGAGGGTAACTCTGCTACTGAGCCATAC
ATTGTTGCTCACAACTTGCTTCTAGCACATGCAACTGCTGTTAAGATCTATAGAGATAAA
TATCAGAAAAGTCAGAAAGGGCAAATAGGAGTTACTCTGGTCACTCATATGTTTGTGCCC
AAAATCAATACACCTCAAGGACTCAAGGCCCCACTAAGAGCTCTTGATTTTATGTTGGGA
TGGTTTTTGGATCCAATAACATATGGTGATTACCCGGCAAGCATGCGAGCTATGGTAGGG
CATCGACTCCCAAAATTCACAGCTGAGGAATCAAAGCTAGTGAAAGGTTCAATGGATTTC
TTAGGGTGTAATTACTATACCACATATTATGCTTCTCCATTGCTCTCTGTTAATAAAGTT
AATCTCAGCTACACCACTGACAATCATGCTGATCTTTCACCATTAAAGGACGGAAAACCT
ATTGGCACACCGACTGCCTTGGATTGGCTTTTCATTTATCCAAAAGGAATCTATGGTCTC
ATGCTTCACATCAAGGAAAAGTATAACAATCCTCCCATTTACATCACTGAAAATGGGATG
GCAGAAGCCAATAATAGCACAATGTCACTTAAAGAATCTTTGAATGATGATATGAGGATA
AAGTATTATGAGGGCCATCTATTGTTTCTATCAAAAGCTATAAAGGCTGGAGCAAACGTT
AAAGGACATTTTGTGTGGTCGCTCTTAGATGATTATGAATGGGATGCTGGTTTCACTGTG
CGATTTGGCCTCACTTTTGTTGACTACAAGAATGGTCTTAAACGATACCATAAGAAATCT
TCTTACTGGTACAAGAAATTTCTATTGTACACTGGCCTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400052225
PEP Infomation

pacid=37477697 transcript=PGSC0003DMT400077068 locus=PGSC0003DMG400029974 ID=PGSC0003DMT400077068.v4.03 annot-version=v4.03
Sequence

MRNLLSFCIFFLIALANLFSLTRAAIPAKRFYAPFNRTSFPPDFVFGASSAAYQIEGEAL
KGGRGPSIWDTFTRQHPEKIFDASTADVAVDFYHRYKEDIQLLKQVGLRAFRMSISWSRI
LPYGKVSKGVNPEGIKFYNDVFNELIANGITPFVTLFHWDTPQALEDEYKGFLSSKIAKD
YGDFVDICFKEFGDRVKHWITLNEPLSYSMNGYTKGTFAPGRCSKYVGNCTEGNSATEPY
IVAHNLLLAHATAVKIYRDKYQKSQKGQIGVTLVTHMFVPKINTPQGLKAPLRALDFMLG
WFLDPITYGDYPASMRAMVGHRLPKFTAEESKLVKGSMDFLGCNYYTTYYASPLLSVNKV
NLSYTTDNHADLSPLKDGKPIGTPTALDWLFIYPKGIYGLMLHIKEKYNNPPIYITENGM
AEANNSTMSLKESLNDDMRIKYYEGHLLFLSKAIKAGANVKGHFVWSLLDDYEWDAGFTV
RFGLTFVDYKNGLKRYHKKSSYWYKKFLLYTGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400077068
Transcript Infomation

pacid=37477697 locus=PGSC0003DMG400029974 ID=PGSC0003DMT400077068.v4.03 annot-version=v4.03
Sequence

ATGAGAAATCTCTTAAGCTTCTGCATTTTTTTCCTTATAGCTCTTGCAAATTTGTTTTCT
CTAACGAGAGCTGCAATCCCTGCAAAGCGCTTTTATGCTCCATTTAATCGAACTAGCTTC
CCTCCTGATTTTGTTTTTGGCGCTTCATCAGCTGCTTATCAGATCGAAGGAGAGGCGCTT
AAAGGAGGAAGAGGACCTAGTATATGGGATACTTTTACTCGCCAGCACCCAGAAAAGATC
TTTGATGCTTCTACAGCAGATGTGGCTGTTGATTTCTACCATCGCTATAAGGAAGACATT
CAACTGCTTAAGCAAGTGGGATTAAGAGCTTTCAGGATGTCTATCTCTTGGTCTCGAATT
TTACCATATGGGAAGGTTAGCAAAGGAGTGAATCCAGAAGGCATCAAATTCTATAATGAT
GTTTTCAACGAGCTAATCGCTAATGGTATAACTCCTTTTGTGACTCTATTCCATTGGGAC
ACACCACAAGCCCTTGAAGACGAATATAAAGGGTTTCTCAGCTCAAAAATAGCGAAAGAT
TATGGTGACTTTGTGGACATTTGCTTCAAAGAATTTGGGGATAGAGTAAAGCATTGGATA
ACTCTAAATGAACCACTTTCTTACAGCATGAATGGATATACAAAAGGAACCTTTGCACCA
GGAAGATGTTCTAAATATGTAGGTAATTGCACTGAGGGTAACTCTGCTACTGAGCCATAC
ATTGTTGCTCACAACTTGCTTCTAGCACATGCAACTGCTGTTAAGATCTATAGAGATAAA
TATCAGAAAAGTCAGAAAGGGCAAATAGGAGTTACTCTGGTCACTCATATGTTTGTGCCC
AAAATCAATACACCTCAAGGACTCAAGGCCCCACTAAGAGCTCTTGATTTTATGTTGGGA
TGGTTTTTGGATCCAATAACATATGGTGATTACCCGGCAAGCATGCGAGCTATGGTAGGG
CATCGACTCCCAAAATTCACAGCTGAGGAATCAAAGCTAGTGAAAGGTTCAATGGATTTC
TTAGGGTGTAATTACTATACCACATATTATGCTTCTCCATTGCTCTCTGTTAATAAAGTT
AATCTCAGCTACACCACTGACAATCATGCTGATCTTTCACCATTAAAGGACGGAAAACCT
ATTGGCACACCGACTGCCTTGGATTGGCTTTTCATTTATCCAAAAGGAATCTATGGTCTC
ATGCTTCACATCAAGGAAAAGTATAACAATCCTCCCATTTACATCACTGAAAATGGGATG
GCAGAAGCCAATAATAGCACAATGTCACTTAAAGAATCTTTGAATGATGATATGAGGATA
AAGTATTATGAGGGCCATCTATTGTTTCTATCAAAAGCTATAAAGGCTGGAGCAAACGTT
AAAGGACATTTTGTGTGGTCGCTCTTAGATGATTATGAATGGGATGCTGGTTTCACTGTG
CGATTTGGCCTCACTTTTGTTGACTACAAGAATGGTCTTAAACGATACCATAAGAAATCT
TCTTACTGGTACAAGAAATTTCTATTGTACACTGGCCTATAA