Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400077053
CDS Infomation

pacid=37432879 polypeptide=PGSC0003DMP400052216 locus=PGSC0003DMG400029966 ID=PGSC0003DMT400077053.v4.03 annot-version=v4.03
Sequence

ATGAAGCCACTTTCATTTTCTTTCTTTAAGATTATGAGTCTTAGGGTAAAGCCATTTTGG
ATTGAATTAGGGTATTTCACAACCCTTTCATTTTTAGGTTTCTTAGCTTTGAATTATTTT
TCAAAACCTAGAACCCTACCGTCTTTTCGTCCTCAAAACCTAGATGTTTTTTTCACTTCT
GTTTCTTCAACCACAGTTTCTAGTATGTCCACTATTGAAATGGAAGTTTTCTCAAATGTT
CAACTTGTTTTCATGACCATATTGATGTTTCTTGGTGGGGAAGCTTTTACCTCTTTTCTT
AGACTTAAACTCATCAAGAAAGAAAACAAAGATGAATCTTTTAGTTGCAAAGATTATGAG
CTAGGAAATGTAATAAACGTGGACGATAAGTTAGAAGATGTAATAATAACAAACCCTATC
GAAGATCATAGTCATCATGATCATCACGATGAAATTATAAAGATTAAATCGATAAGATTG
TTGAGTAACGTGGTTTTTGGATATATTCTAGTTATTATTCTTCTTGGTTCATCGTTAGTT
TCTCTCTATATAATAATCATCCCTAGCGCGAAACAAATCCTTAACAAAAAAGGTCTTAAT
TTACATACTTTTTCACTATTCACCACAGTTTCAACATTTGCAAATTGTGGTTTTGTACCT
ACAAATGAAAACATGATGATTTTCAAGCAAAATTCAGGTACTTCTGGATTGAGTACTTAT
GAGAAGATTGTGGGATCTTTGTTTGAAGTTGTGAATACAAGGCATACCGGTCAATCTGTA
TTTGATCTTTCAACTTTTACTCCAGCAATCTTAGTATTGTTTGCCTCAATGATGTATCTA
TCATCCTATACTACTTTTTTGCCTGTTTACAATTATGAAGAGAAGTCAGAAAAAATGAAG
AAGAGAAAAGGGAGAAGCTTAATGGATTACATATCATTATCACAACCTTCTTGTTTGGTT
ATTTTTACCATTCTTATTTGTGTTGTGGAGAAAGACAAAATGAAAAATGATCCACTCAAC
TTCAATGTACTCAACATTCTCTTTGAAGTCATAAGTGCATATGGGACAGTTGGAATGTCA
ATAGGGTATAGTTGTGCAAGGCAAATAAATCCAGATGGCCATTGCAAGGATGCTACATAT
GGTTTTGCTGGAAAATGGAGTAATACAGGAAAGTTCATTTTGATAATTGTCATGTTCTTT
GGAAGGTTGAAGAAGTATAATCAAAGAGGTGGAAAGGCTTGGAAAGTATTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400052216
PEP Infomation

pacid=37432879 transcript=PGSC0003DMT400077053 locus=PGSC0003DMG400029966 ID=PGSC0003DMT400077053.v4.03 annot-version=v4.03
Sequence

MKPLSFSFFKIMSLRVKPFWIELGYFTTLSFLGFLALNYFSKPRTLPSFRPQNLDVFFTS
VSSTTVSSMSTIEMEVFSNVQLVFMTILMFLGGEAFTSFLRLKLIKKENKDESFSCKDYE
LGNVINVDDKLEDVIITNPIEDHSHHDHHDEIIKIKSIRLLSNVVFGYILVIILLGSSLV
SLYIIIIPSAKQILNKKGLNLHTFSLFTTVSTFANCGFVPTNENMMIFKQNSGTSGLSTY
EKIVGSLFEVVNTRHTGQSVFDLSTFTPAILVLFASMMYLSSYTTFLPVYNYEEKSEKMK
KRKGRSLMDYISLSQPSCLVIFTILICVVEKDKMKNDPLNFNVLNILFEVISAYGTVGMS
IGYSCARQINPDGHCKDATYGFAGKWSNTGKFILIIVMFFGRLKKYNQRGGKAWKVL*

Transcript Sequence

Transcript ID

PGSC0003DMT400077053
Transcript Infomation

pacid=37432879 locus=PGSC0003DMG400029966 ID=PGSC0003DMT400077053.v4.03 annot-version=v4.03
Sequence

ATGAAGCCACTTTCATTTTCTTTCTTTAAGATTATGAGTCTTAGGGTAAAGCCATTTTGG
ATTGAATTAGGGTATTTCACAACCCTTTCATTTTTAGGTTTCTTAGCTTTGAATTATTTT
TCAAAACCTAGAACCCTACCGTCTTTTCGTCCTCAAAACCTAGATGTTTTTTTCACTTCT
GTTTCTTCAACCACAGTTTCTAGTATGTCCACTATTGAAATGGAAGTTTTCTCAAATGTT
CAACTTGTTTTCATGACCATATTGATGTTTCTTGGTGGGGAAGCTTTTACCTCTTTTCTT
AGACTTAAACTCATCAAGAAAGAAAACAAAGATGAATCTTTTAGTTGCAAAGATTATGAG
CTAGGAAATGTAATAAACGTGGACGATAAGTTAGAAGATGTAATAATAACAAACCCTATC
GAAGATCATAGTCATCATGATCATCACGATGAAATTATAAAGATTAAATCGATAAGATTG
TTGAGTAACGTGGTTTTTGGATATATTCTAGTTATTATTCTTCTTGGTTCATCGTTAGTT
TCTCTCTATATAATAATCATCCCTAGCGCGAAACAAATCCTTAACAAAAAAGGTCTTAAT
TTACATACTTTTTCACTATTCACCACAGTTTCAACATTTGCAAATTGTGGTTTTGTACCT
ACAAATGAAAACATGATGATTTTCAAGCAAAATTCAGGTACTTCTGGATTGAGTACTTAT
GAGAAGATTGTGGGATCTTTGTTTGAAGTTGTGAATACAAGGCATACCGGTCAATCTGTA
TTTGATCTTTCAACTTTTACTCCAGCAATCTTAGTATTGTTTGCCTCAATGATGTATCTA
TCATCCTATACTACTTTTTTGCCTGTTTACAATTATGAAGAGAAGTCAGAAAAAATGAAG
AAGAGAAAAGGGAGAAGCTTAATGGATTACATATCATTATCACAACCTTCTTGTTTGGTT
ATTTTTACCATTCTTATTTGTGTTGTGGAGAAAGACAAAATGAAAAATGATCCACTCAAC
TTCAATGTACTCAACATTCTCTTTGAAGTCATAAGTGCATATGGGACAGTTGGAATGTCA
ATAGGGTATAGTTGTGCAAGGCAAATAAATCCAGATGGCCATTGCAAGGATGCTACATAT
GGTTTTGCTGGAAAATGGAGTAATACAGGAAAGTTCATTTTGATAATTGTCATGTTCTTT
GGAAGGTTGAAGAAGTATAATCAAAGAGGTGGAAAGGCTTGGAAAGTATTATAA