Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076942
CDS Infomation

pacid=37450290 polypeptide=PGSC0003DMP400052134 locus=PGSC0003DMG400029928 ID=PGSC0003DMT400076942.v4.03 annot-version=v4.03
Sequence

ATGGCGGTCGTCAAACCAGAGATGAAGTCCTACATTTGGCTCCAAACTGCTGATGGTTCA
ATCCAACAAGTAGAGGAAGAGGTTGCCATGTTTTGCCCAATGATATGCAGAGAAGTACTT
CAAACTGGCATGGGATCCTCGAAAAATTATGCCATATCACTTCCTCAACGAGTCAATCCT
GCTATTCTGGGCTTAATACTGGACTATTGTCAATTTCATCAAGTTCCTGGCCGTTCTAAT
AAGGAGCGCAAGATTTTTGATGAGAAGTTCATCCGGTTAGATACTAAGAAGTTATGTGAG
TTGACATCTGCTGCTGACAGCCTTCAACTGAGGCCTCTGGTTGACCTTACAAGTCGTGCA
CTTGCTCGGATGATTGAAGGAAAAACTCCTGAGGAGATACGTGAAACTTTCCATTTGCCG
GATGATTTAACAGAGGAAGAGAAGTTGGAACCTTTGAGAAATATGACCGATGATCCACGT
ATCCGTCTTCTCAATCGGCTCTATGCAAGGAAAAGGAAAGAATTAAAAGAACGAGAAAAA
TTAAAGAATGTTGAGGTAGAAGAAGAGCAGCATGTGGATGAACGATCAGTTGATGATCTT
CTATCTTTCATAAATGGGGCAGATGAAGATTCTAAGAGTGCAAGAGCAACAAAGAGTAAA
AAGAAAAATAGAAGGAGAAAAGAACAAGCTAGAAATTCCTCTACAAATAATGAAACTGGA
AACCATAATCAGGAATCTAACTGTCCTCCATCTAGCTGCCTGAATGGTGACACCGGTGAT
GTGCCTTCTCCATTTAAGCCTTCTGATCTGCAAGTCTCTGCATCTGTTAAGTTTTCACCC
AAACTTGACTTTGATGATGGTGATATTGATGATGAGTTAGATCCTGCAATGAAGGAAGAA
ATTGACAGGGAGGTTGAGGATTTTGCTAGGAGACTAAACTCTGATTGGCCAGAAAGAATG
CAGGAGATTTTGTCCCTGGGTCAAGAGAGGAGGCCTGTACCACTATCTGTGAACGGGAAT
GGTTCCCTGAGGAGATATACAGGTTTGGACAGGAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400052134
PEP Infomation

pacid=37450290 transcript=PGSC0003DMT400076942 locus=PGSC0003DMG400029928 ID=PGSC0003DMT400076942.v4.03 annot-version=v4.03
Sequence

MAVVKPEMKSYIWLQTADGSIQQVEEEVAMFCPMICREVLQTGMGSSKNYAISLPQRVNP
AILGLILDYCQFHQVPGRSNKERKIFDEKFIRLDTKKLCELTSAADSLQLRPLVDLTSRA
LARMIEGKTPEEIRETFHLPDDLTEEEKLEPLRNMTDDPRIRLLNRLYARKRKELKEREK
LKNVEVEEEQHVDERSVDDLLSFINGADEDSKSARATKSKKKNRRRKEQARNSSTNNETG
NHNQESNCPPSSCLNGDTGDVPSPFKPSDLQVSASVKFSPKLDFDDGDIDDELDPAMKEE
IDREVEDFARRLNSDWPERMQEILSLGQERRPVPLSVNGNGSLRRYTGLDRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400076942
Transcript Infomation

pacid=37450290 locus=PGSC0003DMG400029928 ID=PGSC0003DMT400076942.v4.03 annot-version=v4.03
Sequence

ATGGCGGTCGTCAAACCAGAGATGAAGTCCTACATTTGGCTCCAAACTGCTGATGGTTCA
ATCCAACAAGTAGAGGAAGAGGTTGCCATGTTTTGCCCAATGATATGCAGAGAAGTACTT
CAAACTGGCATGGGATCCTCGAAAAATTATGCCATATCACTTCCTCAACGAGTCAATCCT
GCTATTCTGGGCTTAATACTGGACTATTGTCAATTTCATCAAGTTCCTGGCCGTTCTAAT
AAGGAGCGCAAGATTTTTGATGAGAAGTTCATCCGGTTAGATACTAAGAAGTTATGTGAG
TTGACATCTGCTGCTGACAGCCTTCAACTGAGGCCTCTGGTTGACCTTACAAGTCGTGCA
CTTGCTCGGATGATTGAAGGAAAAACTCCTGAGGAGATACGTGAAACTTTCCATTTGCCG
GATGATTTAACAGAGGAAGAGAAGTTGGAACCTTTGAGAAATATGACCGATGATCCACGT
ATCCGTCTTCTCAATCGGCTCTATGCAAGGAAAAGGAAAGAATTAAAAGAACGAGAAAAA
TTAAAGAATGTTGAGGTAGAAGAAGAGCAGCATGTGGATGAACGATCAGTTGATGATCTT
CTATCTTTCATAAATGGGGCAGATGAAGATTCTAAGAGTGCAAGAGCAACAAAGAGTAAA
AAGAAAAATAGAAGGAGAAAAGAACAAGCTAGAAATTCCTCTACAAATAATGAAACTGGA
AACCATAATCAGGAATCTAACTGTCCTCCATCTAGCTGCCTGAATGGTGACACCGGTGAT
GTGCCTTCTCCATTTAAGCCTTCTGATCTGCAAGTCTCTGCATCTGTTAAGTTTTCACCC
AAACTTGACTTTGATGATGGTGATATTGATGATGAGTTAGATCCTGCAATGAAGGAAGAA
ATTGACAGGGAGGTTGAGGATTTTGCTAGGAGACTAAACTCTGATTGGCCAGAAAGAATG
CAGGAGATTTTGTCCCTGGGTCAAGAGAGGAGGCCTGTACCACTATCTGTGAACGGGAAT
GGTTCCCTGAGGAGATATACAGGTTTGGACAGGAGATAA