Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076932
CDS Infomation

pacid=37453091 polypeptide=PGSC0003DMP400052127 locus=PGSC0003DMG400029921 ID=PGSC0003DMT400076932.v4.03 annot-version=v4.03
Sequence

ATGTCCTCGGATTTCTCAGGCGGAGTTCCTGACTTTTACGGCGGCGCCGGAAGATCCAAC
TTGATTCCGATGAACAACGCTCAGCCACAAATTCAATTCCCCCACCGTCCTGATGGAGCT
TCTCAGAATTTCCACCGGAGACCTACGTTCATCGGCAAACGATCACTCGCAGCCTTTCAA
CAGCAGCAGCAGTTTCAGTTTCTACAACAGCAGCAGCAATTTCAATTTCTGCAACAGCAA
CAACAGCAAGGCTTGGGATTTTATCTTCGTAACGTAAAGCCTAGAAGTTACCAGCAGGCA
TCTCCAATTTCTCCTCTAGATTACTCTGTTTCATCCTCATCGATTTCATCTGAATTTTCT
CCGATGACTGCACGCCATCCCCTCCCGATTTCCACGGCGAACACCAATGGGGTTTTATCT
TCTGGTAACCCGGATTGTTCTGCAGTTGCTTCTTACCTAAATCAGGTACAGAACAGTTTA
TACCAGGAATCAGAGGAAAAAATGATGAATCGACTGCATGAGTTAGAGAAACAGCTCCTA
GAAGACAACAATGAGGAAGAAGAAGATACAGTCTCTGTTGTGACTAACAACGATGAGTGG
TCGGAAACAATAAAGAATCTGATAACTCCGATTAGTAACCACCTATCTCCGGCATCATCT
ACGTCTTCATGTTCTTCTTCTATGGAATCTCCGCCAGTATCTTCTCCCAAGCAGTCTATT
GTCGAAGCTGCTACCGCAATAACCGACGGAAAAACCAATGTTGCAGTACAGATCCTCACG
CGCCTCGCACAGGTCGCTGATGTTAGAGGTTCTTCCGAACAGCGGCTGACGGCGTACATG
GTGTCGGCACTCCGATCGCGCGTGAACTCCACGGAGTATCCACCGCCGGTGATGGAGCTG
CATAGCAAAGAGCACGCAGTTTCAACCCAAAATCTCTACGAGATATCCCCGTGTTTCAAG
CTTGGATTCATGGCAGCTAATTTAGCCATTGTTGAAGCTGTAGCTGATCATCCCTCAAAC
ATAATTCACGTCATTGATTTCGACATAGGACAAGGTGGACAATACTTGCATTTACTACAC
GCGCTAGCTACCAAGAATACAGATTATCCCATCAGCTTAAAAATCACGGCGATCACAACA
GAGTTCACGGGCAGAGCTGATAGCAGAGTAAATTCCATTGAAGATGATCTGAAAACTCTA
GCAAACAAAGTTGGGATTTCCTTGATTTTCAATATAATTTCATGTTCAATCACCGATTTG
AGTAGGGAAAAATTAGGGATTGAACACGACGAAGCTTTAGCAGTGAATTTCGCATACAGA
TTATACAGATTACCCGACGAGAGCGTAACAACAGAGAATCTAAGAGACGAGCTTCTCCGG
CGAGTGAAGGGGTTATCACCAAAGGTGGTGACATTAGTAGAGCAAGAGCTGAACGGGAAC
ACGGCGGCGTTTGTGGCGCGTGTAAACGAGGCGTGTGGCTATTACGGAGCATTGTTGGAT
TCACTGGACGCAACTGTATCAAAAGATGAAACGGGTCGGGTCAAGATCGAAGAAGGGCTG
AGTCGTAAATTAACAAACTCGGTAGCGTGTGAAGGGAGGGATCGTGTAGAGAGATGCGAG
GTGTTTGGTAAATGGAGGGCCCGAATGAGTATGGCTGGGTTCGGGCCTAGGCCCATGAGT
CAACAAATTGCTGATTCACTGCTTAAGAGGCTTAATTCGGGCCCACGTGGCAACCCGGGA
TTTAATGTAAATGAACAAAGTGGGGGTATTAGGTTTGGATGGATGGGAAAAACCCTCACC
GTTGCTTCTGCTTGGTGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052127
PEP Infomation

pacid=37453091 transcript=PGSC0003DMT400076932 locus=PGSC0003DMG400029921 ID=PGSC0003DMT400076932.v4.03 annot-version=v4.03
Sequence

MSSDFSGGVPDFYGGAGRSNLIPMNNAQPQIQFPHRPDGASQNFHRRPTFIGKRSLAAFQ
QQQQFQFLQQQQQFQFLQQQQQQGLGFYLRNVKPRSYQQASPISPLDYSVSSSSISSEFS
PMTARHPLPISTANTNGVLSSGNPDCSAVASYLNQVQNSLYQESEEKMMNRLHELEKQLL
EDNNEEEEDTVSVVTNNDEWSETIKNLITPISNHLSPASSTSSCSSSMESPPVSSPKQSI
VEAATAITDGKTNVAVQILTRLAQVADVRGSSEQRLTAYMVSALRSRVNSTEYPPPVMEL
HSKEHAVSTQNLYEISPCFKLGFMAANLAIVEAVADHPSNIIHVIDFDIGQGGQYLHLLH
ALATKNTDYPISLKITAITTEFTGRADSRVNSIEDDLKTLANKVGISLIFNIISCSITDL
SREKLGIEHDEALAVNFAYRLYRLPDESVTTENLRDELLRRVKGLSPKVVTLVEQELNGN
TAAFVARVNEACGYYGALLDSLDATVSKDETGRVKIEEGLSRKLTNSVACEGRDRVERCE
VFGKWRARMSMAGFGPRPMSQQIADSLLKRLNSGPRGNPGFNVNEQSGGIRFGWMGKTLT
VASAWC*

Transcript Sequence

Transcript ID

PGSC0003DMT400076932
Transcript Infomation

pacid=37453091 locus=PGSC0003DMG400029921 ID=PGSC0003DMT400076932.v4.03 annot-version=v4.03
Sequence

ATGTCCTCGGATTTCTCAGGCGGAGTTCCTGACTTTTACGGCGGCGCCGGAAGATCCAAC
TTGATTCCGATGAACAACGCTCAGCCACAAATTCAATTCCCCCACCGTCCTGATGGAGCT
TCTCAGAATTTCCACCGGAGACCTACGTTCATCGGCAAACGATCACTCGCAGCCTTTCAA
CAGCAGCAGCAGTTTCAGTTTCTACAACAGCAGCAGCAATTTCAATTTCTGCAACAGCAA
CAACAGCAAGGCTTGGGATTTTATCTTCGTAACGTAAAGCCTAGAAGTTACCAGCAGGCA
TCTCCAATTTCTCCTCTAGATTACTCTGTTTCATCCTCATCGATTTCATCTGAATTTTCT
CCGATGACTGCACGCCATCCCCTCCCGATTTCCACGGCGAACACCAATGGGGTTTTATCT
TCTGGTAACCCGGATTGTTCTGCAGTTGCTTCTTACCTAAATCAGGTACAGAACAGTTTA
TACCAGGAATCAGAGGAAAAAATGATGAATCGACTGCATGAGTTAGAGAAACAGCTCCTA
GAAGACAACAATGAGGAAGAAGAAGATACAGTCTCTGTTGTGACTAACAACGATGAGTGG
TCGGAAACAATAAAGAATCTGATAACTCCGATTAGTAACCACCTATCTCCGGCATCATCT
ACGTCTTCATGTTCTTCTTCTATGGAATCTCCGCCAGTATCTTCTCCCAAGCAGTCTATT
GTCGAAGCTGCTACCGCAATAACCGACGGAAAAACCAATGTTGCAGTACAGATCCTCACG
CGCCTCGCACAGGTCGCTGATGTTAGAGGTTCTTCCGAACAGCGGCTGACGGCGTACATG
GTGTCGGCACTCCGATCGCGCGTGAACTCCACGGAGTATCCACCGCCGGTGATGGAGCTG
CATAGCAAAGAGCACGCAGTTTCAACCCAAAATCTCTACGAGATATCCCCGTGTTTCAAG
CTTGGATTCATGGCAGCTAATTTAGCCATTGTTGAAGCTGTAGCTGATCATCCCTCAAAC
ATAATTCACGTCATTGATTTCGACATAGGACAAGGTGGACAATACTTGCATTTACTACAC
GCGCTAGCTACCAAGAATACAGATTATCCCATCAGCTTAAAAATCACGGCGATCACAACA
GAGTTCACGGGCAGAGCTGATAGCAGAGTAAATTCCATTGAAGATGATCTGAAAACTCTA
GCAAACAAAGTTGGGATTTCCTTGATTTTCAATATAATTTCATGTTCAATCACCGATTTG
AGTAGGGAAAAATTAGGGATTGAACACGACGAAGCTTTAGCAGTGAATTTCGCATACAGA
TTATACAGATTACCCGACGAGAGCGTAACAACAGAGAATCTAAGAGACGAGCTTCTCCGG
CGAGTGAAGGGGTTATCACCAAAGGTGGTGACATTAGTAGAGCAAGAGCTGAACGGGAAC
ACGGCGGCGTTTGTGGCGCGTGTAAACGAGGCGTGTGGCTATTACGGAGCATTGTTGGAT
TCACTGGACGCAACTGTATCAAAAGATGAAACGGGTCGGGTCAAGATCGAAGAAGGGCTG
AGTCGTAAATTAACAAACTCGGTAGCGTGTGAAGGGAGGGATCGTGTAGAGAGATGCGAG
GTGTTTGGTAAATGGAGGGCCCGAATGAGTATGGCTGGGTTCGGGCCTAGGCCCATGAGT
CAACAAATTGCTGATTCACTGCTTAAGAGGCTTAATTCGGGCCCACGTGGCAACCCGGGA
TTTAATGTAAATGAACAAAGTGGGGGTATTAGGTTTGGATGGATGGGAAAAACCCTCACC
GTTGCTTCTGCTTGGTGTTAA