Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076909
CDS Infomation

pacid=37450136 polypeptide=PGSC0003DMP400052109 locus=PGSC0003DMG400029915 ID=PGSC0003DMT400076909.v4.03 annot-version=v4.03
Sequence

ATGGCAACTAATTTGACGCTTACAAGGTTATTGAAACTTGTTGCTGAAAAATTCCCTACC
CGCAACGCAATATCTGTTTCGGGAAAATTCATTGTCACGCATGAAAGGCTACAACAACTT
ATTGAACAAGCCGCGTCTCAACTCGTTGCTGCTGGTATTCAGCCCGGTGATGTGGTCGCT
CTCACATTTCCCAATACTATCGAGTTTGTGATTATGTTTTTAGCTGTGATTCGAGTTCGA
GCCACAGCAGCGCCACTGAATTCAGCGTATATGCCCGAAGAGTTCGAGTTTTATTTATCA
GATTCCGAGTCTAAACTGTTGCTAATTGCAAAAGAAGGAAATGAGGCAGCTGAAGCAGCG
GCTGCAAAGCTCAATATTCCTCGGATTAAGGTGACTCTGCCCAATTCCGATTCCGATGTG
TCTCTCAGCCCGAGTAGTCCGCTATCAGATTGTGATTTGGTTTCAGAAATTGTGAATGAT
CCATCCGATGTTGCACTTTTTCTACATACATCAGGCACCACCAGCAGACCAAAAGGCGTT
CCCCTAACACAGCACAATTTAGTATCATCAGTGAACAATATTAAATCGGTTTACAAACTC
ACTGAATCGGACTCTACAGTGATCGTGTTGCCACTCTTTCATGTTCATGGATTGATTGCA
GGATTACTAAGCTCGCTTGGTGCTGGAGGATCCGTAACGCTCCCTGCTTCCGGTAGATTC
TCTGCTTCATCTTTCTGGTCTGACATGATCAAGTCCAACGCCACATGGTACACCGCGGTG
CCTACCATTCACCAGATCCTATTGGACCGTCATTTCAGCAACCCAGAGTCTTCTTACCCG
AGACTCCGGTTCATTAGGAGTTGCAGTGCTGCTCTTGCACCATCCGTATTGGCACGGTTA
GAGGAAGCATTTGGTGCGTCTGTTTTAGAGGCATATGCAATGACAGAAGCAACACATTTG
ATGTGTTCAAATCCATTACCAGAAAATGGTCCACATTTGCCAGGGTCAGTAGGGAAGCCA
GTGGGACAAGAATTGGGGATATTGAATGAGAATGGTGTGGTACAAGGGGCTGATGAAAAG
GGAGAAATTTGCATTAGGGGTCCAAATGTTACAAAAGGGTATAAGAATAATCCTGAGGCT
AATAAATCTGCTTTTCAATTTGGTTGGTTTCATACTGGAGATGTGGGATATTTGGACTCT
GATGGATATTTGCATTTGGTTGGAAGGATCAAGGAGTTGATCAACCGTGGAGGGGAAAAG
ATATCTCCAATTGAAGTGGATGCAGTCCTTGTTTCTCATCCGGAGATTGCTCAGGGTGTT
GCTTTCGGAGTTCCTGATGACAAGTATGGTGAAGAGATAAACTGTGCTGTCATTCCACGC
GAAGGGTCAAAGATAGACGAAGGAGATGTGTTGGGATTTTGCAAGAAAAATCTAGCAGCC
TTTAAGGTCCCCAAAAAGGTGTTCATGACTGATTCTCTTCCAAAAACTGCAACTGGAAAA
ATTCAACGACGACTTGTTGCAGAGCACTTCCTTGCACAGATCTCAACTGCTAAAGTGCCT
AAGTTCGGAGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052109
PEP Infomation

pacid=37450136 transcript=PGSC0003DMT400076909 locus=PGSC0003DMG400029915 ID=PGSC0003DMT400076909.v4.03 annot-version=v4.03
Sequence

MATNLTLTRLLKLVAEKFPTRNAISVSGKFIVTHERLQQLIEQAASQLVAAGIQPGDVVA
LTFPNTIEFVIMFLAVIRVRATAAPLNSAYMPEEFEFYLSDSESKLLLIAKEGNEAAEAA
AAKLNIPRIKVTLPNSDSDVSLSPSSPLSDCDLVSEIVNDPSDVALFLHTSGTTSRPKGV
PLTQHNLVSSVNNIKSVYKLTESDSTVIVLPLFHVHGLIAGLLSSLGAGGSVTLPASGRF
SASSFWSDMIKSNATWYTAVPTIHQILLDRHFSNPESSYPRLRFIRSCSAALAPSVLARL
EEAFGASVLEAYAMTEATHLMCSNPLPENGPHLPGSVGKPVGQELGILNENGVVQGADEK
GEICIRGPNVTKGYKNNPEANKSAFQFGWFHTGDVGYLDSDGYLHLVGRIKELINRGGEK
ISPIEVDAVLVSHPEIAQGVAFGVPDDKYGEEINCAVIPREGSKIDEGDVLGFCKKNLAA
FKVPKKVFMTDSLPKTATGKIQRRLVAEHFLAQISTAKVPKFGA*

Transcript Sequence

Transcript ID

PGSC0003DMT400076909
Transcript Infomation

pacid=37450136 locus=PGSC0003DMG400029915 ID=PGSC0003DMT400076909.v4.03 annot-version=v4.03
Sequence

ATGGCAACTAATTTGACGCTTACAAGGTTATTGAAACTTGTTGCTGAAAAATTCCCTACC
CGCAACGCAATATCTGTTTCGGGAAAATTCATTGTCACGCATGAAAGGCTACAACAACTT
ATTGAACAAGCCGCGTCTCAACTCGTTGCTGCTGGTATTCAGCCCGGTGATGTGGTCGCT
CTCACATTTCCCAATACTATCGAGTTTGTGATTATGTTTTTAGCTGTGATTCGAGTTCGA
GCCACAGCAGCGCCACTGAATTCAGCGTATATGCCCGAAGAGTTCGAGTTTTATTTATCA
GATTCCGAGTCTAAACTGTTGCTAATTGCAAAAGAAGGAAATGAGGCAGCTGAAGCAGCG
GCTGCAAAGCTCAATATTCCTCGGATTAAGGTGACTCTGCCCAATTCCGATTCCGATGTG
TCTCTCAGCCCGAGTAGTCCGCTATCAGATTGTGATTTGGTTTCAGAAATTGTGAATGAT
CCATCCGATGTTGCACTTTTTCTACATACATCAGGCACCACCAGCAGACCAAAAGGCGTT
CCCCTAACACAGCACAATTTAGTATCATCAGTGAACAATATTAAATCGGTTTACAAACTC
ACTGAATCGGACTCTACAGTGATCGTGTTGCCACTCTTTCATGTTCATGGATTGATTGCA
GGATTACTAAGCTCGCTTGGTGCTGGAGGATCCGTAACGCTCCCTGCTTCCGGTAGATTC
TCTGCTTCATCTTTCTGGTCTGACATGATCAAGTCCAACGCCACATGGTACACCGCGGTG
CCTACCATTCACCAGATCCTATTGGACCGTCATTTCAGCAACCCAGAGTCTTCTTACCCG
AGACTCCGGTTCATTAGGAGTTGCAGTGCTGCTCTTGCACCATCCGTATTGGCACGGTTA
GAGGAAGCATTTGGTGCGTCTGTTTTAGAGGCATATGCAATGACAGAAGCAACACATTTG
ATGTGTTCAAATCCATTACCAGAAAATGGTCCACATTTGCCAGGGTCAGTAGGGAAGCCA
GTGGGACAAGAATTGGGGATATTGAATGAGAATGGTGTGGTACAAGGGGCTGATGAAAAG
GGAGAAATTTGCATTAGGGGTCCAAATGTTACAAAAGGGTATAAGAATAATCCTGAGGCT
AATAAATCTGCTTTTCAATTTGGTTGGTTTCATACTGGAGATGTGGGATATTTGGACTCT
GATGGATATTTGCATTTGGTTGGAAGGATCAAGGAGTTGATCAACCGTGGAGGGGAAAAG
ATATCTCCAATTGAAGTGGATGCAGTCCTTGTTTCTCATCCGGAGATTGCTCAGGGTGTT
GCTTTCGGAGTTCCTGATGACAAGTATGGTGAAGAGATAAACTGTGCTGTCATTCCACGC
GAAGGGTCAAAGATAGACGAAGGAGATGTGTTGGGATTTTGCAAGAAAAATCTAGCAGCC
TTTAAGGTCCCCAAAAAGGTGTTCATGACTGATTCTCTTCCAAAAACTGCAACTGGAAAA
ATTCAACGACGACTTGTTGCAGAGCACTTCCTTGCACAGATCTCAACTGCTAAAGTGCCT
AAGTTCGGAGCTTGA