Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076891
CDS Infomation

pacid=37436423 polypeptide=PGSC0003DMP400052102 locus=PGSC0003DMG400029908 ID=PGSC0003DMT400076891.v4.03 annot-version=v4.03
Sequence

ATGGATGAGATTGGAATTGATATCAGCTCGGACATTGAAGTCGATGACATAAGGTGTGAC
AATATAGCAGAAAAGGATGTCAGTGATGAAGAGATTGATCCTGAGGAATTGGAGAGGCGA
ATGTGGAAGGATCGTGTCAAGCTCAAGAGGCTTAAGGAAAGGCAGAAAATTGCTGCACAA
CAAGCTGCAGAGAAGCAGAAGAACAAGCAAACCACTGATCAAGCTCGGCGGAAAAAGATG
TCAAGAGCTCAGGATGGGATTTTGAAGTACATGTTGAAACTCATGGAGGTCTGCAAGGCT
CGAGGATTTGTTTATGGCATTATACCTGAGAAGGGTAAACCAGTGAGTGGTTCATCTGAT
AACATAAGAGCTTGGTGGAAGGAGAAGGTGAAATTTGATAAGAATGGTCCTGCTGCAATA
GCCAAGTATGAAGCAGAATGTCATGCAAAAGGAGAGGGAATCGGCAACCAAAATGGGAAC
CCACAAAGTGTTCTGCAGGACTTGCAAGATGCAACCTTGGGGTCCCTTTTGTCTTCTTTA
ATGCAACATTGTGATCCACCTCAGCGGAAGTACCCATTGGAGAAAGGTGTCTCACCACCC
TGGTGGCCATCAGGGAATGACGAATGGTGGGTGAAAATGGGTCTGCCTAAGGGTCAGAAA
CCACCGTATAAGAAGCCACATGATTTAAAGAAAATGTTTAAAGTTGGTGTTCTAACTGCT
GTTATAAAGCATATGTCACCTGATATTGCAAAGATCAGGAGATTAGTGCGGCAGTCAAAG
TGTTTACAGGATAAGATGACTGCAAAGGAGAGCTCAATATGGTTAGCTGTTTTAAGCAGA
GAGGAATCCACTATCCGGCTACAAACCAGTGACAATGGGTCATCTAGCATAAGTGAGGCA
CCTATTAGAGGTCATGGTGACAAAAAGAAACCTTCTGTTGATAGTGACAGTGATTATGAT
GTTGATGATGTTAATGTCTCTGTTTCATCTAGAGATGAGAGGAGAAATGAACCATTGGAT
GCTCGTCCTCTGAATGATGTTCCTCAATCTCACCAAAGTAAGGAGCAGGGAGATGGAAAA
CGTCGAAGAAGAAAACGTGCTAGGTCAAACTTTCAACAGACTCAACTGTCTCCCAGTGAG
CAGCAACCTGATGACGTGGCTAGAAACACCTTACCTGATATGAACAATTCCAATGTTCAG
TTTTCTGGGTACATTGCAAATGAAAGCCAACCAGAGAACAATATGATGGTACCGAGGAAG
TCTGTGGAGAGAAACTCTGAGGGTCAATCTGACTTACCATTGAAAGACTCCAACCTTTCC
ATGGTTCCATCAGCTAATGCAGTCTCTACAGAGGAAGCATTCGTTGGCAATGGGCCATCA
ATTTATCCAATGTTGGAAAATTCTGAGGTTGTCCCATATGAATCAAGGTTTCATCTTGGA
ACTCAAGATTCCGTTGTGCAGCACCAGCTTCATGATACCCAATTGCAGAGCAGACCTCAG
TTTTCTGGGATGAATAATGAACCTCCAAATTCCATATTTCATTATGGACCTCCAAACAAT
GGGTTGCATAATGGATCTCGAAGTTCTGTCCTACATCATGAACTACAGGATTCGGGTTTC
ACTCATGGATCTCAATATTTGAACTTGCATAAACCCCCCATATATCAATATTACACACCA
TCAGCTGAACTTGGATCAGCTCATGAAGAGCAGCAGTCTCACTTGGCATTCGGTCAGCCT
CAGATTAAGCCACAGGATTCTGGAGTTAGATCAGCAGTGCTTCATGGAGATAGAAATGGT
ATTTCCAGAGAGGACCACCATTATGGGAAAGACACATTTCATAATGATCACGACAGACCA
GCTGAGATGCATTTTGTATCTCCGATCACTAGTGGCTCTCCAGATTATGCTAGACTCAGC
AGTCCGTTTAACTTTGAGCTTGATGTCCCAAGTCCATTAGATACTGGTGATTTGGAACTA
TTCCTTGATGAAGATGTGATGACATTCTTTGCCTCGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400052102
PEP Infomation

pacid=37436423 transcript=PGSC0003DMT400076891 locus=PGSC0003DMG400029908 ID=PGSC0003DMT400076891.v4.03 annot-version=v4.03
Sequence

MDEIGIDISSDIEVDDIRCDNIAEKDVSDEEIDPEELERRMWKDRVKLKRLKERQKIAAQ
QAAEKQKNKQTTDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSD
NIRAWWKEKVKFDKNGPAAIAKYEAECHAKGEGIGNQNGNPQSVLQDLQDATLGSLLSSL
MQHCDPPQRKYPLEKGVSPPWWPSGNDEWWVKMGLPKGQKPPYKKPHDLKKMFKVGVLTA
VIKHMSPDIAKIRRLVRQSKCLQDKMTAKESSIWLAVLSREESTIRLQTSDNGSSSISEA
PIRGHGDKKKPSVDSDSDYDVDDVNVSVSSRDERRNEPLDARPLNDVPQSHQSKEQGDGK
RRRRKRARSNFQQTQLSPSEQQPDDVARNTLPDMNNSNVQFSGYIANESQPENNMMVPRK
SVERNSEGQSDLPLKDSNLSMVPSANAVSTEEAFVGNGPSIYPMLENSEVVPYESRFHLG
TQDSVVQHQLHDTQLQSRPQFSGMNNEPPNSIFHYGPPNNGLHNGSRSSVLHHELQDSGF
THGSQYLNLHKPPIYQYYTPSAELGSAHEEQQSHLAFGQPQIKPQDSGVRSAVLHGDRNG
ISREDHHYGKDTFHNDHDRPAEMHFVSPITSGSPDYARLSSPFNFELDVPSPLDTGDLEL
FLDEDVMTFFAS*

Transcript Sequence

Transcript ID

PGSC0003DMT400076891
Transcript Infomation

pacid=37436423 locus=PGSC0003DMG400029908 ID=PGSC0003DMT400076891.v4.03 annot-version=v4.03
Sequence

ATGGATGAGATTGGAATTGATATCAGCTCGGACATTGAAGTCGATGACATAAGGTGTGAC
AATATAGCAGAAAAGGATGTCAGTGATGAAGAGATTGATCCTGAGGAATTGGAGAGGCGA
ATGTGGAAGGATCGTGTCAAGCTCAAGAGGCTTAAGGAAAGGCAGAAAATTGCTGCACAA
CAAGCTGCAGAGAAGCAGAAGAACAAGCAAACCACTGATCAAGCTCGGCGGAAAAAGATG
TCAAGAGCTCAGGATGGGATTTTGAAGTACATGTTGAAACTCATGGAGGTCTGCAAGGCT
CGAGGATTTGTTTATGGCATTATACCTGAGAAGGGTAAACCAGTGAGTGGTTCATCTGAT
AACATAAGAGCTTGGTGGAAGGAGAAGGTGAAATTTGATAAGAATGGTCCTGCTGCAATA
GCCAAGTATGAAGCAGAATGTCATGCAAAAGGAGAGGGAATCGGCAACCAAAATGGGAAC
CCACAAAGTGTTCTGCAGGACTTGCAAGATGCAACCTTGGGGTCCCTTTTGTCTTCTTTA
ATGCAACATTGTGATCCACCTCAGCGGAAGTACCCATTGGAGAAAGGTGTCTCACCACCC
TGGTGGCCATCAGGGAATGACGAATGGTGGGTGAAAATGGGTCTGCCTAAGGGTCAGAAA
CCACCGTATAAGAAGCCACATGATTTAAAGAAAATGTTTAAAGTTGGTGTTCTAACTGCT
GTTATAAAGCATATGTCACCTGATATTGCAAAGATCAGGAGATTAGTGCGGCAGTCAAAG
TGTTTACAGGATAAGATGACTGCAAAGGAGAGCTCAATATGGTTAGCTGTTTTAAGCAGA
GAGGAATCCACTATCCGGCTACAAACCAGTGACAATGGGTCATCTAGCATAAGTGAGGCA
CCTATTAGAGGTCATGGTGACAAAAAGAAACCTTCTGTTGATAGTGACAGTGATTATGAT
GTTGATGATGTTAATGTCTCTGTTTCATCTAGAGATGAGAGGAGAAATGAACCATTGGAT
GCTCGTCCTCTGAATGATGTTCCTCAATCTCACCAAAGTAAGGAGCAGGGAGATGGAAAA
CGTCGAAGAAGAAAACGTGCTAGGTCAAACTTTCAACAGACTCAACTGTCTCCCAGTGAG
CAGCAACCTGATGACGTGGCTAGAAACACCTTACCTGATATGAACAATTCCAATGTTCAG
TTTTCTGGGTACATTGCAAATGAAAGCCAACCAGAGAACAATATGATGGTACCGAGGAAG
TCTGTGGAGAGAAACTCTGAGGGTCAATCTGACTTACCATTGAAAGACTCCAACCTTTCC
ATGGTTCCATCAGCTAATGCAGTCTCTACAGAGGAAGCATTCGTTGGCAATGGGCCATCA
ATTTATCCAATGTTGGAAAATTCTGAGGTTGTCCCATATGAATCAAGGTTTCATCTTGGA
ACTCAAGATTCCGTTGTGCAGCACCAGCTTCATGATACCCAATTGCAGAGCAGACCTCAG
TTTTCTGGGATGAATAATGAACCTCCAAATTCCATATTTCATTATGGACCTCCAAACAAT
GGGTTGCATAATGGATCTCGAAGTTCTGTCCTACATCATGAACTACAGGATTCGGGTTTC
ACTCATGGATCTCAATATTTGAACTTGCATAAACCCCCCATATATCAATATTACACACCA
TCAGCTGAACTTGGATCAGCTCATGAAGAGCAGCAGTCTCACTTGGCATTCGGTCAGCCT
CAGATTAAGCCACAGGATTCTGGAGTTAGATCAGCAGTGCTTCATGGAGATAGAAATGGT
ATTTCCAGAGAGGACCACCATTATGGGAAAGACACATTTCATAATGATCACGACAGACCA
GCTGAGATGCATTTTGTATCTCCGATCACTAGTGGCTCTCCAGATTATGCTAGACTCAGC
AGTCCGTTTAACTTTGAGCTTGATGTCCCAAGTCCATTAGATACTGGTGATTTGGAACTA
TTCCTTGATGAAGATGTGATGACATTCTTTGCCTCGTAG