Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076866
CDS Infomation

pacid=37469844 polypeptide=PGSC0003DMP400052081 locus=PGSC0003DMG400029897 ID=PGSC0003DMT400076866.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCACAATGTTCTCTCTAGCTTCTGTCACTCCTTCAGCTTCAATTTCCTTGCAA
GATAATCTCAAGCCAAAGCTGAAGCTAGGGACTTCTAGCCAAAGGGCCTTTCCCAGGAAG
GACTTCATGAAGGCAAAGTCAAATGGTCGGACTACTATGGCTGTTGCTGTTAACGTCTCT
CGATTTGAGGGAATAACAATGGCTCCCCCTGACCCCATTCTTGGAGTCTCTGAAGCATTC
AAGGCTGATACAAATGAACTGAAGCTTAACCTTGGAGTTGGAGCTTACCGCACAGAGGAT
CTTCAACCATATGTCCTCAATGTTGTTAAGAAAGCAGAGAACCTTATCCTGGAGAGAGGA
GAAAACAAAGAGTATCTTCCAATAGAAGGTTTGGCTGCATTCAACAAAGTCACAGCAGAG
TTATTGTTTGGAAAAGATAACCCGGTGCTTCAGCAACAAAGGGTGGCTACGATTCAAGGT
CTATCAGGAACTGGGTCATTGCGTATTGCTGCAGCACTGATAGAGCGTTACTTCCCTGGC
TCTAAGATTTTGATATCATCTCCAACATGGGGAAATCATAAAAACATTTTTAATGATGCC
AGAGTACCTTGGTCTGAATATCGATATTATGATCCCAAAACAGTTGGCCTTGACTTTGCT
GGGATGATAGAAGATATAAAGGCTGCCCCAGAAGGATCATTTATCTTGCTCCACGGCTGT
GCACACAACCCAACTGGTATTGATCCCACACCTGAGCAATGGGAAAAGATCGCTGATGTA
ATTCAGGAGAAGAACCACATTCCATTTTTTGATGTTGCCTACCAGGGATTTGCAAGTGGC
AGCCTTGACGAAGATGCCTCATCTGTGAGAATGTTTGCTGCACGTGGTATGGAGCTTTTG
GTTGCTCAATCATATAGTAAAAATCTGGGTCTCTATGGAGAAAGGATTGGGGCTATTAAT
GTTCTTTGCTCATCTGCTGATGCAGCAACAAGGGTGAAAAGCCAGCTAAAGAGGCTTGCT
CGACCAATGTACTCCAATCCTCCCATTCACGGTGCTAAAATTGTTGCCAATGTCGTTGGA
ACTCCAGAGCTCTTCAGTGAATGGAAAGAAGAGATGGAAATGATGGCAGGGAGGATAAAG
AGTGTTAGACAGAAGCTATATGATAGCCTCTCCGCCAAGGATAAGAGTGGAAAGGACTGG
TCGTTCATTCTGAAGCAGATAGGAATGTTCTCCTTCACAGGTCTCAACAAAGCTCAGAGC
GAGAACATGGCCGATAAGTGGCATGTGTACATGACAAAAGATGGGAGGATATCCTTGGCT
GGATTATCGGCTGCTAAATGTGAATATCTTGCTGATGCCATCATTGACTCATACTACAAT
GTGAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052081
PEP Infomation

pacid=37469844 transcript=PGSC0003DMT400076866 locus=PGSC0003DMG400029897 ID=PGSC0003DMT400076866.v4.03 annot-version=v4.03
Sequence

MASTMFSLASVTPSASISLQDNLKPKLKLGTSSQRAFPRKDFMKAKSNGRTTMAVAVNVS
RFEGITMAPPDPILGVSEAFKADTNELKLNLGVGAYRTEDLQPYVLNVVKKAENLILERG
ENKEYLPIEGLAAFNKVTAELLFGKDNPVLQQQRVATIQGLSGTGSLRIAAALIERYFPG
SKILISSPTWGNHKNIFNDARVPWSEYRYYDPKTVGLDFAGMIEDIKAAPEGSFILLHGC
AHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDASSVRMFAARGMELL
VAQSYSKNLGLYGERIGAINVLCSSADAATRVKSQLKRLARPMYSNPPIHGAKIVANVVG
TPELFSEWKEEMEMMAGRIKSVRQKLYDSLSAKDKSGKDWSFILKQIGMFSFTGLNKAQS
ENMADKWHVYMTKDGRISLAGLSAAKCEYLADAIIDSYYNVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400076866
Transcript Infomation

pacid=37469844 locus=PGSC0003DMG400029897 ID=PGSC0003DMT400076866.v4.03 annot-version=v4.03
Sequence

ATGGCTTCCACAATGTTCTCTCTAGCTTCTGTCACTCCTTCAGCTTCAATTTCCTTGCAA
GATAATCTCAAGCCAAAGCTGAAGCTAGGGACTTCTAGCCAAAGGGCCTTTCCCAGGAAG
GACTTCATGAAGGCAAAGTCAAATGGTCGGACTACTATGGCTGTTGCTGTTAACGTCTCT
CGATTTGAGGGAATAACAATGGCTCCCCCTGACCCCATTCTTGGAGTCTCTGAAGCATTC
AAGGCTGATACAAATGAACTGAAGCTTAACCTTGGAGTTGGAGCTTACCGCACAGAGGAT
CTTCAACCATATGTCCTCAATGTTGTTAAGAAAGCAGAGAACCTTATCCTGGAGAGAGGA
GAAAACAAAGAGTATCTTCCAATAGAAGGTTTGGCTGCATTCAACAAAGTCACAGCAGAG
TTATTGTTTGGAAAAGATAACCCGGTGCTTCAGCAACAAAGGGTGGCTACGATTCAAGGT
CTATCAGGAACTGGGTCATTGCGTATTGCTGCAGCACTGATAGAGCGTTACTTCCCTGGC
TCTAAGATTTTGATATCATCTCCAACATGGGGAAATCATAAAAACATTTTTAATGATGCC
AGAGTACCTTGGTCTGAATATCGATATTATGATCCCAAAACAGTTGGCCTTGACTTTGCT
GGGATGATAGAAGATATAAAGGCTGCCCCAGAAGGATCATTTATCTTGCTCCACGGCTGT
GCACACAACCCAACTGGTATTGATCCCACACCTGAGCAATGGGAAAAGATCGCTGATGTA
ATTCAGGAGAAGAACCACATTCCATTTTTTGATGTTGCCTACCAGGGATTTGCAAGTGGC
AGCCTTGACGAAGATGCCTCATCTGTGAGAATGTTTGCTGCACGTGGTATGGAGCTTTTG
GTTGCTCAATCATATAGTAAAAATCTGGGTCTCTATGGAGAAAGGATTGGGGCTATTAAT
GTTCTTTGCTCATCTGCTGATGCAGCAACAAGGGTGAAAAGCCAGCTAAAGAGGCTTGCT
CGACCAATGTACTCCAATCCTCCCATTCACGGTGCTAAAATTGTTGCCAATGTCGTTGGA
ACTCCAGAGCTCTTCAGTGAATGGAAAGAAGAGATGGAAATGATGGCAGGGAGGATAAAG
AGTGTTAGACAGAAGCTATATGATAGCCTCTCCGCCAAGGATAAGAGTGGAAAGGACTGG
TCGTTCATTCTGAAGCAGATAGGAATGTTCTCCTTCACAGGTCTCAACAAAGCTCAGAGC
GAGAACATGGCCGATAAGTGGCATGTGTACATGACAAAAGATGGGAGGATATCCTTGGCT
GGATTATCGGCTGCTAAATGTGAATATCTTGCTGATGCCATCATTGACTCATACTACAAT
GTGAGCTAA