Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076860
CDS Infomation

pacid=37467644 polypeptide=PGSC0003DMP400052078 locus=PGSC0003DMG400029895 ID=PGSC0003DMT400076860.v4.03 annot-version=v4.03
Sequence

ATGTCGTTGAGGCCGAACGCCAGAACCGAGGTTCGCCGGAACCGTTACAAAGTTGCCGTC
GATGCCGAGGAAGGTCGCCGGAGAAGAGAGGATAATATGGTTGAGATTCGTAAGAATAAG
AGAGAGGAGAACTTGCAGAAGAAGCGACGTGAAGGCCTTCAAGCTAATCAGCAATTTGCT
GTTCCTGTTCAGGCCACCGTTGAAAAGAAGCTGGAGAATTTACCAGCAATGGTTGCCGGT
GTTTGGACTGAAGATGGCAATCTTCAGCTTGAAGCTACTACTCAGTTTCGAAAGCTGCTT
TCCATAGAAAGGAGTCCCCCAATTGAGGAGGTAATTCAAGCAGGTGTTGTTCCTCGGTTT
GTTCAATTTCTTATGAGGGATGACTTTCCACAACTTCAGTTTGAGGCAGCATGGGCTCTC
ACAAATATTGCTTCGGGGACATCTGAGCATACCAAGGTGGTGATTGAATCTGGTGCAGTC
CCAATTTTTGTGAAACTTCTTAGTTCTCCAAGTGATGATGTGCGAGAGCAGGCTGTGTGG
GCTCTTGGAAATGTTGCTGGTGATTCCCCAAAATGCCGTGATCTTGTCCTTAACTGTGGA
GCTTTGCTTCCCTTGCTGTCTCAGCTGAATCCAAATGCCAAGCTCTCTATGTTGAGAAAT
GCAACTTGGACACTTTCAAATTTCTGCAGAGGCAAACCACAGCCTGCTTTTGATCAGACG
AAGCCTGCACTTCCAGCTCTTCAACAACTAATTCATTCAACCGATGAAGAAGTTTTGACT
GATGCTTGCTGGGCACTTTCATATCTCTCTGATGGTACAAATGATAAAATTCAAGCTGTT
ATTGATTCTGGAGTATGCCCACGATTAGTCGAGTTATTACTTCACCCATCTCCATCGGTT
TTGATTCCCGCTCTTCGGACTGTTGGGAATATTGTGACAGGAGATGATATGCAAACTCAG
TGTATCATCGGCCATCAGGCTTTGCCCTGTCTTTTGAACTTGTTGAATGGTAGTCACAAG
AAGAGTATTAAGAAGGAAGCTTGTTGGACAATTTCTAACATCACGGCTGGCAACCGGGAG
CAAATTCAGTGTGTGGTTGACGCTGGTATTATAGGTCCCCTTGTTAATTTGCTACAAAAT
GCGGAGTTTGAAATAAAAAAGGAGGCTGCATGGGCAATTTCAAATGCCACATCTGGTGGT
TCACATGAGCAGATCAAGTACCTTGTTAGTCAAGGTTGTATCAAACCATTGTGTGATCTC
CTCATTTGTCCTGACCCAAGGATTGTCACAGTTTGTCTTGAAGGGCTTGAAAATATTTTG
AAGGTTGGGGAAGCTGAGAAGAATTTGGGCCGGACATCAGATATAAATCTTTATGCTCAG
CTGATTGATGATGCTGAAGGTTTAGAAAAAATTGAGAATCTTCAAAGCCATGACAATCAA
GAGATTTATGAAAAGGCAGTTAAGATTCTTGAGACGTACTGGTTGGAAGAAGATGATGAG
ACGATGCCACCTGGTGATGCACCCCAACAAGGTTTTCAGTTTGGAGGTGGCGAGGTCTCT
GTGCCCTCCGGGGGATTCAGCTTCAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052078
PEP Infomation

pacid=37467644 transcript=PGSC0003DMT400076860 locus=PGSC0003DMG400029895 ID=PGSC0003DMT400076860.v4.03 annot-version=v4.03
Sequence

MSLRPNARTEVRRNRYKVAVDAEEGRRRREDNMVEIRKNKREENLQKKRREGLQANQQFA
VPVQATVEKKLENLPAMVAGVWTEDGNLQLEATTQFRKLLSIERSPPIEEVIQAGVVPRF
VQFLMRDDFPQLQFEAAWALTNIASGTSEHTKVVIESGAVPIFVKLLSSPSDDVREQAVW
ALGNVAGDSPKCRDLVLNCGALLPLLSQLNPNAKLSMLRNATWTLSNFCRGKPQPAFDQT
KPALPALQQLIHSTDEEVLTDACWALSYLSDGTNDKIQAVIDSGVCPRLVELLLHPSPSV
LIPALRTVGNIVTGDDMQTQCIIGHQALPCLLNLLNGSHKKSIKKEACWTISNITAGNRE
QIQCVVDAGIIGPLVNLLQNAEFEIKKEAAWAISNATSGGSHEQIKYLVSQGCIKPLCDL
LICPDPRIVTVCLEGLENILKVGEAEKNLGRTSDINLYAQLIDDAEGLEKIENLQSHDNQ
EIYEKAVKILETYWLEEDDETMPPGDAPQQGFQFGGGEVSVPSGGFSFN*

Transcript Sequence

Transcript ID

PGSC0003DMT400076860
Transcript Infomation

pacid=37467644 locus=PGSC0003DMG400029895 ID=PGSC0003DMT400076860.v4.03 annot-version=v4.03
Sequence

ATGTCGTTGAGGCCGAACGCCAGAACCGAGGTTCGCCGGAACCGTTACAAAGTTGCCGTC
GATGCCGAGGAAGGTCGCCGGAGAAGAGAGGATAATATGGTTGAGATTCGTAAGAATAAG
AGAGAGGAGAACTTGCAGAAGAAGCGACGTGAAGGCCTTCAAGCTAATCAGCAATTTGCT
GTTCCTGTTCAGGCCACCGTTGAAAAGAAGCTGGAGAATTTACCAGCAATGGTTGCCGGT
GTTTGGACTGAAGATGGCAATCTTCAGCTTGAAGCTACTACTCAGTTTCGAAAGCTGCTT
TCCATAGAAAGGAGTCCCCCAATTGAGGAGGTAATTCAAGCAGGTGTTGTTCCTCGGTTT
GTTCAATTTCTTATGAGGGATGACTTTCCACAACTTCAGTTTGAGGCAGCATGGGCTCTC
ACAAATATTGCTTCGGGGACATCTGAGCATACCAAGGTGGTGATTGAATCTGGTGCAGTC
CCAATTTTTGTGAAACTTCTTAGTTCTCCAAGTGATGATGTGCGAGAGCAGGCTGTGTGG
GCTCTTGGAAATGTTGCTGGTGATTCCCCAAAATGCCGTGATCTTGTCCTTAACTGTGGA
GCTTTGCTTCCCTTGCTGTCTCAGCTGAATCCAAATGCCAAGCTCTCTATGTTGAGAAAT
GCAACTTGGACACTTTCAAATTTCTGCAGAGGCAAACCACAGCCTGCTTTTGATCAGACG
AAGCCTGCACTTCCAGCTCTTCAACAACTAATTCATTCAACCGATGAAGAAGTTTTGACT
GATGCTTGCTGGGCACTTTCATATCTCTCTGATGGTACAAATGATAAAATTCAAGCTGTT
ATTGATTCTGGAGTATGCCCACGATTAGTCGAGTTATTACTTCACCCATCTCCATCGGTT
TTGATTCCCGCTCTTCGGACTGTTGGGAATATTGTGACAGGAGATGATATGCAAACTCAG
TGTATCATCGGCCATCAGGCTTTGCCCTGTCTTTTGAACTTGTTGAATGGTAGTCACAAG
AAGAGTATTAAGAAGGAAGCTTGTTGGACAATTTCTAACATCACGGCTGGCAACCGGGAG
CAAATTCAGTGTGTGGTTGACGCTGGTATTATAGGTCCCCTTGTTAATTTGCTACAAAAT
GCGGAGTTTGAAATAAAAAAGGAGGCTGCATGGGCAATTTCAAATGCCACATCTGGTGGT
TCACATGAGCAGATCAAGTACCTTGTTAGTCAAGGTTGTATCAAACCATTGTGTGATCTC
CTCATTTGTCCTGACCCAAGGATTGTCACAGTTTGTCTTGAAGGGCTTGAAAATATTTTG
AAGGTTGGGGAAGCTGAGAAGAATTTGGGCCGGACATCAGATATAAATCTTTATGCTCAG
CTGATTGATGATGCTGAAGGTTTAGAAAAAATTGAGAATCTTCAAAGCCATGACAATCAA
GAGATTTATGAAAAGGCAGTTAAGATTCTTGAGACGTACTGGTTGGAAGAAGATGATGAG
ACGATGCCACCTGGTGATGCACCCCAACAAGGTTTTCAGTTTGGAGGTGGCGAGGTCTCT
GTGCCCTCCGGGGGATTCAGCTTCAACTAA