Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076840
CDS Infomation

pacid=37457242 polypeptide=PGSC0003DMP400052063 locus=PGSC0003DMG400029885 ID=PGSC0003DMT400076840.v4.03 annot-version=v4.03
Sequence

ATGGCAGACGACAGTAAATTCTGTTTTTTCTTGGTTTCAACATTTTTGTTGTTGGCTGTT
GTGGTTAATGTGACATTGGCTGCCAATTATGTGCCCGGTGATGATATTCTGTTGAACTGT
GGAGGTCCTGACAATCTCCCAGATGCTGATGGTCGGAAATGGGGCACAGATATTGGGTCA
AAATATATGTTGGGTAGTAAGTCATCAACCTCTGATGCTGCTGATCAAAAGCCCTCTGTC
CCTCAAGTTCCTTTTATGTCTGCCCGTGTTTTCCAGTCTGAGTTCACCTATAGTTTCCCT
GTAGCATCTGGTCGTAAGTTTGTCCGTCTGTATTTCTATCCCTCGTCTTACAACAAGCTA
AATGCTACTAATGCCATCTTCAATGTGGCCTCCGGACAATATACCTTACTTAGAAATTTC
AGTGCAGCACAAACTGCTGAAGCCCTCAACTATGATTACTTGACCAAGGAATTCTCAATA
AATGTGCCATCTGAAACTTTGAACATCACTTTCACACCCTCTCCAAATACTTCAAACTCC
TTTGCGTTTGTCAATGGGATTGAGATTATTTCACACCCTGATATCTATAATACAGAAGAT
GGAAATACCTTCATTGTGGGTCAGAAATCCTCTTTCATCATTGGCAATTCTACTGCCTTG
GAAAATGTTTATCGCCTTAATGTGGGAGGCAATGTAATCTCACCATCAGGTGATACTGGT
ATGTTTAGGTCATGGGGTGATGACTCAAATTATATTTTTGGAGCAGCCACCGGAGTTACC
AATACTGCCGATGATGAGAATGTCACAATAAGCTATGGTAATGGGCAGCCTACCTACGTT
GCCCCACTTGATGTCTATAAGACAGCTAGGTTAATGGGTCCAACTTTTCAAATTAACGAG
CAATTCAATTTGAGTTGGGTTTTCTCAGTTGATTCAGGGTTCTCGTATCTTGTTAGGCTC
CATTTCTGTGAAATCACTAAAAATATCACAAAAGTCAACCAGAGGGTGTTTGTCATCTAC
ATGAATAATCAGACTGCAGAACCTGCAGCGGATGTCATTGCTTGGGCTGGTGGCAATGGA
GTTCCTTTTCACAAGGATTATGTGGTCTCTGTTCCTCGTGGGGCTTCACAGCAGGATCTT
TGGCTTGCCCTCCATCCAAACGTTGCTTCAAAATCCAATTGGTATGATGCAATTTTGAAT
GGAATAGAGATTTTCAAAGTGAGTGACACCAATAATAACCTTGCTGGGCCTAATCCTGTT
CCAGTTGCAGAACCAGATCATATTGACCCTCTGCCGTCCAAAACAGGTGAATCAAAAAAT
AATAAATCAGCTATTGGTGGAGGCGTTGGAGGAGGAATTGCTGCTGTAGTTCTTATTGGT
TTAGTTGTATGCCTTGTCATGCGCCGCCGGAAACGTGGGAAGGTCCAAAGTCCTAGTGAT
GGACCATCAGGCTGGCTCCCTCTTTCTTTGTATGGAAATTCACATACTTCTGGTTCCGCT
AAGACAAACACTACTGGCAGTTATGCTTCGTCCCTCCCATCAAACCTTTGTCGTCACTTT
TCATTTGCTGAGATCAAGGCAGCCACCAATAACTTTGATGAAGCACTGCTTCTTGGGGTT
GGTGGTTTTGGAAAAGTATATCAGGGAGAAATTGATGGTGGCACAAAAGTTGCTATTAAA
CGTGGGAATCCTCTCTCCGAGCAAGGTGTTCATGAATTCCAAACTGAAATTGAAATGCTC
TCAAAACTTCGCCATCGCCATCTTGTTTCTTTGATTGGTTATTGTGAAGAGAACTGTGAA
ATGATCCTAGTATATGACTACATGGCTCATGGTACCCTTCGTGAGCACCTCTATAAGACC
CAGAAGCCTCCTTTACCATGGAAGCAGAGGCTTGAGATTTGCATTGGTGCTGCTCGTGGG
TTGCACTATCTTCATACTGGTGCCAAGCATACTATTATCCACCGTGATGTGAAGACCACT
AATATCCTCTTGGATGAGAAGTGGGTGGCAAAGGTTTCTGATTTTGGTTTGTCTAAAACA
GGTCCTACATTGGATCACACCCATGTCAGTACGGTGGTGAAGGGCAGTTTTGGATATCTG
GATCCAGAATACTTCAGAAGGCAGCAACTGACAGACAAATCTGATGTCTACTCATTTGGT
GTAGTGCTGTTTGAGATTTTGTGTGCTCGGCCAGCTCTGAACCCAACTCTTCCAAAGGAG
CAAGTAAGCTTGGCAGAGTGGGCTTTCCATTGCTACAAGAAGGGGACTTTTGACCAGATA
ATCGACCCATATCTGAAAGGGAAGCTTGCACCAGAGTGCTTGAAGAAATTTACAGAAACA
GCAGTGAAGTGTGTGTCTGATGTTGGTGTAGACAGGCCGTCGATGGGAGATGTGCTGTGG
AACCTTGAATTTGCTCTGCAACTTCAGGAGAGTGCAGAGGAGTGTGGGAAGGGTTTTGGG
AAAATGGACATTGAAGAAGGGTTTGATGATGTTACATGCAAAGGAAAGAAGGATTTAAAT
GAATCCCCAGGTTATGATGCAAGCATGACTGATTCAAGAAGCAGCGGCATATCTATGAGC
ATTGGCGGCCGCAGCCTTGCCAGCGAAGACTCAGATGGGCTAACACCTAGTGCTGTTTTC
TCTCAAATCATGAATCCAAAAGGACGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052063
PEP Infomation

pacid=37457242 transcript=PGSC0003DMT400076840 locus=PGSC0003DMG400029885 ID=PGSC0003DMT400076840.v4.03 annot-version=v4.03
Sequence

MADDSKFCFFLVSTFLLLAVVVNVTLAANYVPGDDILLNCGGPDNLPDADGRKWGTDIGS
KYMLGSKSSTSDAADQKPSVPQVPFMSARVFQSEFTYSFPVASGRKFVRLYFYPSSYNKL
NATNAIFNVASGQYTLLRNFSAAQTAEALNYDYLTKEFSINVPSETLNITFTPSPNTSNS
FAFVNGIEIISHPDIYNTEDGNTFIVGQKSSFIIGNSTALENVYRLNVGGNVISPSGDTG
MFRSWGDDSNYIFGAATGVTNTADDENVTISYGNGQPTYVAPLDVYKTARLMGPTFQINE
QFNLSWVFSVDSGFSYLVRLHFCEITKNITKVNQRVFVIYMNNQTAEPAADVIAWAGGNG
VPFHKDYVVSVPRGASQQDLWLALHPNVASKSNWYDAILNGIEIFKVSDTNNNLAGPNPV
PVAEPDHIDPLPSKTGESKNNKSAIGGGVGGGIAAVVLIGLVVCLVMRRRKRGKVQSPSD
GPSGWLPLSLYGNSHTSGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGV
GGFGKVYQGEIDGGTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCE
MILVYDYMAHGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTT
NILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFG
VVLFEILCARPALNPTLPKEQVSLAEWAFHCYKKGTFDQIIDPYLKGKLAPECLKKFTET
AVKCVSDVGVDRPSMGDVLWNLEFALQLQESAEECGKGFGKMDIEEGFDDVTCKGKKDLN
ESPGYDASMTDSRSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400076840
Transcript Infomation

pacid=37457242 locus=PGSC0003DMG400029885 ID=PGSC0003DMT400076840.v4.03 annot-version=v4.03
Sequence

ATGGCAGACGACAGTAAATTCTGTTTTTTCTTGGTTTCAACATTTTTGTTGTTGGCTGTT
GTGGTTAATGTGACATTGGCTGCCAATTATGTGCCCGGTGATGATATTCTGTTGAACTGT
GGAGGTCCTGACAATCTCCCAGATGCTGATGGTCGGAAATGGGGCACAGATATTGGGTCA
AAATATATGTTGGGTAGTAAGTCATCAACCTCTGATGCTGCTGATCAAAAGCCCTCTGTC
CCTCAAGTTCCTTTTATGTCTGCCCGTGTTTTCCAGTCTGAGTTCACCTATAGTTTCCCT
GTAGCATCTGGTCGTAAGTTTGTCCGTCTGTATTTCTATCCCTCGTCTTACAACAAGCTA
AATGCTACTAATGCCATCTTCAATGTGGCCTCCGGACAATATACCTTACTTAGAAATTTC
AGTGCAGCACAAACTGCTGAAGCCCTCAACTATGATTACTTGACCAAGGAATTCTCAATA
AATGTGCCATCTGAAACTTTGAACATCACTTTCACACCCTCTCCAAATACTTCAAACTCC
TTTGCGTTTGTCAATGGGATTGAGATTATTTCACACCCTGATATCTATAATACAGAAGAT
GGAAATACCTTCATTGTGGGTCAGAAATCCTCTTTCATCATTGGCAATTCTACTGCCTTG
GAAAATGTTTATCGCCTTAATGTGGGAGGCAATGTAATCTCACCATCAGGTGATACTGGT
ATGTTTAGGTCATGGGGTGATGACTCAAATTATATTTTTGGAGCAGCCACCGGAGTTACC
AATACTGCCGATGATGAGAATGTCACAATAAGCTATGGTAATGGGCAGCCTACCTACGTT
GCCCCACTTGATGTCTATAAGACAGCTAGGTTAATGGGTCCAACTTTTCAAATTAACGAG
CAATTCAATTTGAGTTGGGTTTTCTCAGTTGATTCAGGGTTCTCGTATCTTGTTAGGCTC
CATTTCTGTGAAATCACTAAAAATATCACAAAAGTCAACCAGAGGGTGTTTGTCATCTAC
ATGAATAATCAGACTGCAGAACCTGCAGCGGATGTCATTGCTTGGGCTGGTGGCAATGGA
GTTCCTTTTCACAAGGATTATGTGGTCTCTGTTCCTCGTGGGGCTTCACAGCAGGATCTT
TGGCTTGCCCTCCATCCAAACGTTGCTTCAAAATCCAATTGGTATGATGCAATTTTGAAT
GGAATAGAGATTTTCAAAGTGAGTGACACCAATAATAACCTTGCTGGGCCTAATCCTGTT
CCAGTTGCAGAACCAGATCATATTGACCCTCTGCCGTCCAAAACAGGTGAATCAAAAAAT
AATAAATCAGCTATTGGTGGAGGCGTTGGAGGAGGAATTGCTGCTGTAGTTCTTATTGGT
TTAGTTGTATGCCTTGTCATGCGCCGCCGGAAACGTGGGAAGGTCCAAAGTCCTAGTGAT
GGACCATCAGGCTGGCTCCCTCTTTCTTTGTATGGAAATTCACATACTTCTGGTTCCGCT
AAGACAAACACTACTGGCAGTTATGCTTCGTCCCTCCCATCAAACCTTTGTCGTCACTTT
TCATTTGCTGAGATCAAGGCAGCCACCAATAACTTTGATGAAGCACTGCTTCTTGGGGTT
GGTGGTTTTGGAAAAGTATATCAGGGAGAAATTGATGGTGGCACAAAAGTTGCTATTAAA
CGTGGGAATCCTCTCTCCGAGCAAGGTGTTCATGAATTCCAAACTGAAATTGAAATGCTC
TCAAAACTTCGCCATCGCCATCTTGTTTCTTTGATTGGTTATTGTGAAGAGAACTGTGAA
ATGATCCTAGTATATGACTACATGGCTCATGGTACCCTTCGTGAGCACCTCTATAAGACC
CAGAAGCCTCCTTTACCATGGAAGCAGAGGCTTGAGATTTGCATTGGTGCTGCTCGTGGG
TTGCACTATCTTCATACTGGTGCCAAGCATACTATTATCCACCGTGATGTGAAGACCACT
AATATCCTCTTGGATGAGAAGTGGGTGGCAAAGGTTTCTGATTTTGGTTTGTCTAAAACA
GGTCCTACATTGGATCACACCCATGTCAGTACGGTGGTGAAGGGCAGTTTTGGATATCTG
GATCCAGAATACTTCAGAAGGCAGCAACTGACAGACAAATCTGATGTCTACTCATTTGGT
GTAGTGCTGTTTGAGATTTTGTGTGCTCGGCCAGCTCTGAACCCAACTCTTCCAAAGGAG
CAAGTAAGCTTGGCAGAGTGGGCTTTCCATTGCTACAAGAAGGGGACTTTTGACCAGATA
ATCGACCCATATCTGAAAGGGAAGCTTGCACCAGAGTGCTTGAAGAAATTTACAGAAACA
GCAGTGAAGTGTGTGTCTGATGTTGGTGTAGACAGGCCGTCGATGGGAGATGTGCTGTGG
AACCTTGAATTTGCTCTGCAACTTCAGGAGAGTGCAGAGGAGTGTGGGAAGGGTTTTGGG
AAAATGGACATTGAAGAAGGGTTTGATGATGTTACATGCAAAGGAAAGAAGGATTTAAAT
GAATCCCCAGGTTATGATGCAAGCATGACTGATTCAAGAAGCAGCGGCATATCTATGAGC
ATTGGCGGCCGCAGCCTTGCCAGCGAAGACTCAGATGGGCTAACACCTAGTGCTGTTTTC
TCTCAAATCATGAATCCAAAAGGACGTTAA