Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076836
CDS Infomation

pacid=37450930 polypeptide=PGSC0003DMP400052061 locus=PGSC0003DMG400029881 ID=PGSC0003DMT400076836.v4.03 annot-version=v4.03
Sequence

ATGCCTTCAACGATTCAAGGCGATGAGGGTATGAACCCCATTGTTGTGGCAATTGATAAA
GACAAGCACAGCTCTTCTGCTGTCAAATGGGCGGTTGATCATCTCGTCATAAGCAATCCA
GCCCTTGTTTTAGTACATGTTAGGATGAAGAACTCACCAAATCAGGTTGGTGGTAACGGT
GCTGGTCAAAGTTCAAATCGTGGATTAAGTGATCAAGATAGTCACAAGGTGTTTATACCT
TTCAGGGCTTACTCTGCACGTAAAGGGATAGCAGTGAAAGAGGTTATTATTGAGGATATT
TCAGTGTCTAAGGGACTTCTAGACTATATCAACAACTATCATATCACCAACGTCGTTGTT
GGTGCATCATCAAGAAGTGCTTTTTCCAGGAAATTTTGGACTCATGATGTTCCAACTATC
GTAAACAAGGCTGCACCCGATTATTGTACTGTATACGTGATTTCAAAAGGCAAGCAACAA
TCCGTCAGACCAGCAGCTAAACCTCTTGCTAGTTCTTCAGCAAGGCTACCATCTTCCCAA
CCATGGTCAGCAGCTAGGCTAAGTAATTACTCTGAACCAGAAGATATATCCAGATCAGCA
TATAAAAATAGTTTTGGACCTGACATGATGCCTAAAAGTGGAACATCTAATGCATCAATC
GACAGTCTTGATTTTTATTCTAGAGACCCAAAGAATTCATATACTGGCCGCAGTTCTCCC
TCCGATGATACTGCTCTATTTGCACCTCTTAGCCGTGGATCAGTCGATGTCACAACCCAA
AATCTTGACTTCACTCAAGTTTCAGTAAACGACAATTCTAGCTCCTCGTCTATGTGGGAG
TCTGAGATGAGCAGATTAAAGCTAGAGCTAAAGCAAACCATGGATATGTACAACTCAGCT
TGCAAAGACGCTGTCTCCGCAAACCAAACGGCTAAAGAGCTTCATCAATGGAAAGTGGAA
GAAGGTAGTAGGTTCAAACAGTCTCGTATTTCTGAAGAGGCAGCTCTCGCTATGGCTGAG
ATGGAAAAAGCTAAAGGCAGAGCTGCTGTTGAAGCTGCTCAAAAATCACAAAGGTTGGCT
GAAATAGAAGCAAAAAGAAGAAGGTATGCAGAGTTGAAAGCCAGGCGAGAGACAGAAGAA
AAGAATCTAGCAATAAATGATCTATCTCGAAATGAAATCTGCTATAGGAAATATACGATA
GAAGAGATTGAGATAACCACCAAAAGTTTCTCAAATTCCGAGAAGATCGGTGAAGGTGGA
TATGGCCCTGTTTACAAAGGGAGACTTGATCACACTCCTGTTGCCATTAAAGTTTTGAGA
TCCGATGCTGCACAAGGGATGCAACAGTTCAAGCAAGAGGTTCAGGTCCTTGGTCTCATG
AGGCACCCAAATATGGTGCTACTCTTAGGAGCATGTCCCGAGTACGGATGTTTAGTGTAT
GAATTCATGAATAATGGTAGCCTGGAAGATCGCCTGTTCCGTAAAGGTAACACCCCTCCA
ATCCCATGGGAAATACGGTTCAAAATAGCTGCTGAAATAGCTACAGGGCTTTTATTCCTT
CACCAAGCAAAGCCAGAACCTCTTGTCCATCGTGACCTTAAACCAGGAAACATTCTTTTA
GACAGCAATTATGCCTGCAAAATTAGTGATGTTGGGTTGGCTAGGTTAGTTCCACCATCT
GTAGCTGATTGTGTTACACAATATCACATGACTTCAGCTGCAGGAACTTTTTGTTACATT
GATCCCGAATATCAACAGACAGGAAAGTTAGGGACTAAATCGGATATATATTCACTTGGT
GTAATGTTGCTCCAAATTATAACTGCAAGGCCCCCGATGGGTTTAACTCATCACGTGGAG
AGGGCCATTGAGAACGGAACATTTTCAGATATACTAGATCCAACAGTGCCAAACTGGCCG
TTGGAAGAGGCTCTTAACTATGCAAAATTGTCACTCAAGTGTGCTGAGTTGCGGAAGAAA
GATCGACCTGATCTTGGTTCGGTGATATTGCCCGAGCTTAGTAGGCTAAAAGAACTTGGA
ATGAGCAGTCTTAACACTGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400052061
PEP Infomation

pacid=37450930 transcript=PGSC0003DMT400076836 locus=PGSC0003DMG400029881 ID=PGSC0003DMT400076836.v4.03 annot-version=v4.03
Sequence

MPSTIQGDEGMNPIVVAIDKDKHSSSAVKWAVDHLVISNPALVLVHVRMKNSPNQVGGNG
AGQSSNRGLSDQDSHKVFIPFRAYSARKGIAVKEVIIEDISVSKGLLDYINNYHITNVVV
GASSRSAFSRKFWTHDVPTIVNKAAPDYCTVYVISKGKQQSVRPAAKPLASSSARLPSSQ
PWSAARLSNYSEPEDISRSAYKNSFGPDMMPKSGTSNASIDSLDFYSRDPKNSYTGRSSP
SDDTALFAPLSRGSVDVTTQNLDFTQVSVNDNSSSSSMWESEMSRLKLELKQTMDMYNSA
CKDAVSANQTAKELHQWKVEEGSRFKQSRISEEAALAMAEMEKAKGRAAVEAAQKSQRLA
EIEAKRRRYAELKARRETEEKNLAINDLSRNEICYRKYTIEEIEITTKSFSNSEKIGEGG
YGPVYKGRLDHTPVAIKVLRSDAAQGMQQFKQEVQVLGLMRHPNMVLLLGACPEYGCLVY
EFMNNGSLEDRLFRKGNTPPIPWEIRFKIAAEIATGLLFLHQAKPEPLVHRDLKPGNILL
DSNYACKISDVGLARLVPPSVADCVTQYHMTSAAGTFCYIDPEYQQTGKLGTKSDIYSLG
VMLLQIITARPPMGLTHHVERAIENGTFSDILDPTVPNWPLEEALNYAKLSLKCAELRKK
DRPDLGSVILPELSRLKELGMSSLNTA*

Transcript Sequence

Transcript ID

PGSC0003DMT400076836
Transcript Infomation

pacid=37450930 locus=PGSC0003DMG400029881 ID=PGSC0003DMT400076836.v4.03 annot-version=v4.03
Sequence

ATGCCTTCAACGATTCAAGGCGATGAGGGTATGAACCCCATTGTTGTGGCAATTGATAAA
GACAAGCACAGCTCTTCTGCTGTCAAATGGGCGGTTGATCATCTCGTCATAAGCAATCCA
GCCCTTGTTTTAGTACATGTTAGGATGAAGAACTCACCAAATCAGGTTGGTGGTAACGGT
GCTGGTCAAAGTTCAAATCGTGGATTAAGTGATCAAGATAGTCACAAGGTGTTTATACCT
TTCAGGGCTTACTCTGCACGTAAAGGGATAGCAGTGAAAGAGGTTATTATTGAGGATATT
TCAGTGTCTAAGGGACTTCTAGACTATATCAACAACTATCATATCACCAACGTCGTTGTT
GGTGCATCATCAAGAAGTGCTTTTTCCAGGAAATTTTGGACTCATGATGTTCCAACTATC
GTAAACAAGGCTGCACCCGATTATTGTACTGTATACGTGATTTCAAAAGGCAAGCAACAA
TCCGTCAGACCAGCAGCTAAACCTCTTGCTAGTTCTTCAGCAAGGCTACCATCTTCCCAA
CCATGGTCAGCAGCTAGGCTAAGTAATTACTCTGAACCAGAAGATATATCCAGATCAGCA
TATAAAAATAGTTTTGGACCTGACATGATGCCTAAAAGTGGAACATCTAATGCATCAATC
GACAGTCTTGATTTTTATTCTAGAGACCCAAAGAATTCATATACTGGCCGCAGTTCTCCC
TCCGATGATACTGCTCTATTTGCACCTCTTAGCCGTGGATCAGTCGATGTCACAACCCAA
AATCTTGACTTCACTCAAGTTTCAGTAAACGACAATTCTAGCTCCTCGTCTATGTGGGAG
TCTGAGATGAGCAGATTAAAGCTAGAGCTAAAGCAAACCATGGATATGTACAACTCAGCT
TGCAAAGACGCTGTCTCCGCAAACCAAACGGCTAAAGAGCTTCATCAATGGAAAGTGGAA
GAAGGTAGTAGGTTCAAACAGTCTCGTATTTCTGAAGAGGCAGCTCTCGCTATGGCTGAG
ATGGAAAAAGCTAAAGGCAGAGCTGCTGTTGAAGCTGCTCAAAAATCACAAAGGTTGGCT
GAAATAGAAGCAAAAAGAAGAAGGTATGCAGAGTTGAAAGCCAGGCGAGAGACAGAAGAA
AAGAATCTAGCAATAAATGATCTATCTCGAAATGAAATCTGCTATAGGAAATATACGATA
GAAGAGATTGAGATAACCACCAAAAGTTTCTCAAATTCCGAGAAGATCGGTGAAGGTGGA
TATGGCCCTGTTTACAAAGGGAGACTTGATCACACTCCTGTTGCCATTAAAGTTTTGAGA
TCCGATGCTGCACAAGGGATGCAACAGTTCAAGCAAGAGGTTCAGGTCCTTGGTCTCATG
AGGCACCCAAATATGGTGCTACTCTTAGGAGCATGTCCCGAGTACGGATGTTTAGTGTAT
GAATTCATGAATAATGGTAGCCTGGAAGATCGCCTGTTCCGTAAAGGTAACACCCCTCCA
ATCCCATGGGAAATACGGTTCAAAATAGCTGCTGAAATAGCTACAGGGCTTTTATTCCTT
CACCAAGCAAAGCCAGAACCTCTTGTCCATCGTGACCTTAAACCAGGAAACATTCTTTTA
GACAGCAATTATGCCTGCAAAATTAGTGATGTTGGGTTGGCTAGGTTAGTTCCACCATCT
GTAGCTGATTGTGTTACACAATATCACATGACTTCAGCTGCAGGAACTTTTTGTTACATT
GATCCCGAATATCAACAGACAGGAAAGTTAGGGACTAAATCGGATATATATTCACTTGGT
GTAATGTTGCTCCAAATTATAACTGCAAGGCCCCCGATGGGTTTAACTCATCACGTGGAG
AGGGCCATTGAGAACGGAACATTTTCAGATATACTAGATCCAACAGTGCCAAACTGGCCG
TTGGAAGAGGCTCTTAACTATGCAAAATTGTCACTCAAGTGTGCTGAGTTGCGGAAGAAA
GATCGACCTGATCTTGGTTCGGTGATATTGCCCGAGCTTAGTAGGCTAAAAGAACTTGGA
ATGAGCAGTCTTAACACTGCTTGA