Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076798
CDS Infomation

pacid=37467646 polypeptide=PGSC0003DMP400052035 locus=PGSC0003DMG400029870 ID=PGSC0003DMT400076798.v4.03 annot-version=v4.03
Sequence

ATGGGTGAGACTGGAAAAAGATCACGTAGGGATGATGGAGATAACAAGAACCAGAAGAGG
AGGACAGATAGGGACGAGAAAAGCGATGATGAGCTAATAGTTTACAGAATTCTGTGTCCA
AATAATGTGATTGGCAGTGTTATTGGAAAGAATGGGAAAGTTATAAATTCAATTAGGTCT
GAGACTAAGGCGAAGGTCAAGGTGGTGGATCCATTTCCAGGTGCTAAGGATAGAGTTATA
CTCATTTATTGCTATGTAAAGGAAAAGGAAGATGTTGAGGTTGATCAGGAGTTCAATGAG
AAAAAACCTCTTTGCACGGCTCAGGATGCTCTTCTCAAGGTTTATACGGCAATTGCAAAT
GCTTTGGCTGCAATTGGAGAATCTGATAAGAAGCGGAAGGATAAAGAGGAGTGTCAGCTT
CTTGCTCCTTCAAGCCAGTCTGCTAATATCATTGGTAAATCTGGTACCACCATAAAGAAG
TTGAGAAGCAAGCTGAGGGCCAATATTAAAGTAGTTGCCAGAGATGCTAGTGATCCAACA
CATTCCTGTGCACTCGAGTTTGATAACTTTGTTCTGATAACTGGTGACCCAGAATCTGTT
AGGAGATCACTCTTTGCTATTTCTGCAATCATGTACAAGTTCACACCTAAGGAAGAAATT
CCTCTTACTACCAATGTTCCTGAAGTTCGTCCAAGTATTATTATCCCTTCAGATGTTCCC
ATATATCCAGGAGCTGGGATTTATCCAAATGTGGATCCTATTATGCCATCTCGATCTGTT
CCATCTGTTTTGGGTACCACACAAATACCAGAGCTTCCGGGTTATGTGGATGCAGGAAGC
ACATGGCCTATTTATTCTTCTGGTCTTCCCATGGTTTCTGGTTACAGTGGTGCCTCTCAA
ACTGAGGAATTGACTATTAGAGTGCTGTGTCCAACTAACAATATTGGTCGTGTTATTGGC
AAGGGAGGAGCTTCGATTAAAAGTGTAAGGCAAACAAGTGGTGCTCGTATTGAGGTTTGT
GATGCCAAAGCTGATCGTGATCAGTGCATTATCACAGTCATTTCCACTGAGTCAGTGGAT
GATCTTAAATCCATGGCAGTTGAAGCTGTACTTCTGCTGCAAGGGAAAATAAATGACGAA
GATGAGGATACTGTAACTTTTCGTCTACTTGTTCCATCCAAGATTATTGGATGTATCATT
GGGAAAGGTGGTTCAATCGTTAATGAAATCCGGAAGAGAACTAGAGCTGATGTACGTATC
TCAAAAGGCGAAAGGCCCAAATGTGCAGATTCAAATGATGAACTTGTTGAGGTGTCTGGG
GAAGTTAGTAGTGTGAGGGACGCCCTTATCCAGATTGTACTGAGGCTCAGAGATGATGTT
ATAAAAGGCCGAGAAGGTAATCATAATCCATCTGCAGGTGCTGATTCTTTACGCGCTGGT
GGTACTGGTTTCTCATTGGCTCCAGTGTTGCCCAACGTTCCTCCAGCTGCTCCTTTGAGC
TATGAACATAGGATTGAAACTGGGAATGGTGTTGGAATGCGTTCTTCGGGCAGCCGCTAT
GGTCATGAGTCGCTCTCGATGGGGGACGATAGCTATGGAACGTTCTCTTCATATTCCTCA
AAGTTATATGGCGGATTGCCTCCACCCTCAGCTGTAGAGATGGTTATCCCAGGACATGCA
GTCGGTAAAGTTATGGGTAAAGGTGGCTCAAACATAGATAATATCCGCAAGATATCTGGG
GCAGCTGTGGATATAATCGATTCCAAATCCTCTCGAGGTGATCAGATTGCTATAATATCT
GGTACGCAGGAACAGAAGCGTGCTGCTGAGAACTTGATTCAGGCATTCATAATGGCGACT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400052035
PEP Infomation

pacid=37467646 transcript=PGSC0003DMT400076798 locus=PGSC0003DMG400029870 ID=PGSC0003DMT400076798.v4.03 annot-version=v4.03
Sequence

MGETGKRSRRDDGDNKNQKRRTDRDEKSDDELIVYRILCPNNVIGSVIGKNGKVINSIRS
ETKAKVKVVDPFPGAKDRVILIYCYVKEKEDVEVDQEFNEKKPLCTAQDALLKVYTAIAN
ALAAIGESDKKRKDKEECQLLAPSSQSANIIGKSGTTIKKLRSKLRANIKVVARDASDPT
HSCALEFDNFVLITGDPESVRRSLFAISAIMYKFTPKEEIPLTTNVPEVRPSIIIPSDVP
IYPGAGIYPNVDPIMPSRSVPSVLGTTQIPELPGYVDAGSTWPIYSSGLPMVSGYSGASQ
TEELTIRVLCPTNNIGRVIGKGGASIKSVRQTSGARIEVCDAKADRDQCIITVISTESVD
DLKSMAVEAVLLLQGKINDEDEDTVTFRLLVPSKIIGCIIGKGGSIVNEIRKRTRADVRI
SKGERPKCADSNDELVEVSGEVSSVRDALIQIVLRLRDDVIKGREGNHNPSAGADSLRAG
GTGFSLAPVLPNVPPAAPLSYEHRIETGNGVGMRSSGSRYGHESLSMGDDSYGTFSSYSS
KLYGGLPPPSAVEMVIPGHAVGKVMGKGGSNIDNIRKISGAAVDIIDSKSSRGDQIAIIS
GTQEQKRAAENLIQAFIMAT*

Transcript Sequence

Transcript ID

PGSC0003DMT400076798
Transcript Infomation

pacid=37467646 locus=PGSC0003DMG400029870 ID=PGSC0003DMT400076798.v4.03 annot-version=v4.03
Sequence

ATGGGTGAGACTGGAAAAAGATCACGTAGGGATGATGGAGATAACAAGAACCAGAAGAGG
AGGACAGATAGGGACGAGAAAAGCGATGATGAGCTAATAGTTTACAGAATTCTGTGTCCA
AATAATGTGATTGGCAGTGTTATTGGAAAGAATGGGAAAGTTATAAATTCAATTAGGTCT
GAGACTAAGGCGAAGGTCAAGGTGGTGGATCCATTTCCAGGTGCTAAGGATAGAGTTATA
CTCATTTATTGCTATGTAAAGGAAAAGGAAGATGTTGAGGTTGATCAGGAGTTCAATGAG
AAAAAACCTCTTTGCACGGCTCAGGATGCTCTTCTCAAGGTTTATACGGCAATTGCAAAT
GCTTTGGCTGCAATTGGAGAATCTGATAAGAAGCGGAAGGATAAAGAGGAGTGTCAGCTT
CTTGCTCCTTCAAGCCAGTCTGCTAATATCATTGGTAAATCTGGTACCACCATAAAGAAG
TTGAGAAGCAAGCTGAGGGCCAATATTAAAGTAGTTGCCAGAGATGCTAGTGATCCAACA
CATTCCTGTGCACTCGAGTTTGATAACTTTGTTCTGATAACTGGTGACCCAGAATCTGTT
AGGAGATCACTCTTTGCTATTTCTGCAATCATGTACAAGTTCACACCTAAGGAAGAAATT
CCTCTTACTACCAATGTTCCTGAAGTTCGTCCAAGTATTATTATCCCTTCAGATGTTCCC
ATATATCCAGGAGCTGGGATTTATCCAAATGTGGATCCTATTATGCCATCTCGATCTGTT
CCATCTGTTTTGGGTACCACACAAATACCAGAGCTTCCGGGTTATGTGGATGCAGGAAGC
ACATGGCCTATTTATTCTTCTGGTCTTCCCATGGTTTCTGGTTACAGTGGTGCCTCTCAA
ACTGAGGAATTGACTATTAGAGTGCTGTGTCCAACTAACAATATTGGTCGTGTTATTGGC
AAGGGAGGAGCTTCGATTAAAAGTGTAAGGCAAACAAGTGGTGCTCGTATTGAGGTTTGT
GATGCCAAAGCTGATCGTGATCAGTGCATTATCACAGTCATTTCCACTGAGTCAGTGGAT
GATCTTAAATCCATGGCAGTTGAAGCTGTACTTCTGCTGCAAGGGAAAATAAATGACGAA
GATGAGGATACTGTAACTTTTCGTCTACTTGTTCCATCCAAGATTATTGGATGTATCATT
GGGAAAGGTGGTTCAATCGTTAATGAAATCCGGAAGAGAACTAGAGCTGATGTACGTATC
TCAAAAGGCGAAAGGCCCAAATGTGCAGATTCAAATGATGAACTTGTTGAGGTGTCTGGG
GAAGTTAGTAGTGTGAGGGACGCCCTTATCCAGATTGTACTGAGGCTCAGAGATGATGTT
ATAAAAGGCCGAGAAGGTAATCATAATCCATCTGCAGGTGCTGATTCTTTACGCGCTGGT
GGTACTGGTTTCTCATTGGCTCCAGTGTTGCCCAACGTTCCTCCAGCTGCTCCTTTGAGC
TATGAACATAGGATTGAAACTGGGAATGGTGTTGGAATGCGTTCTTCGGGCAGCCGCTAT
GGTCATGAGTCGCTCTCGATGGGGGACGATAGCTATGGAACGTTCTCTTCATATTCCTCA
AAGTTATATGGCGGATTGCCTCCACCCTCAGCTGTAGAGATGGTTATCCCAGGACATGCA
GTCGGTAAAGTTATGGGTAAAGGTGGCTCAAACATAGATAATATCCGCAAGATATCTGGG
GCAGCTGTGGATATAATCGATTCCAAATCCTCTCGAGGTGATCAGATTGCTATAATATCT
GGTACGCAGGAACAGAAGCGTGCTGCTGAGAACTTGATTCAGGCATTCATAATGGCGACT
TGA