Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076796
CDS Infomation

pacid=37460849 polypeptide=PGSC0003DMP400052034 locus=PGSC0003DMG400029868 ID=PGSC0003DMT400076796.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTGTCAGCTCCAAGCAGGCCAGAGCCCATTCTCCGCCCCCACGACGCAATTCT
TCTCTAACAACTCCTATTATTATTAATGCTGATATTACTGAACACAATGTGTACCATGTC
AAGGCTGGATTTGCACCTCTGGAGAAGATCAAAGAGGAACCCGAAAAGGAGAAGAAGGAA
GAATCGTTAATCCAACGAAGCTCCTCCAATTCTAAGGCTTCGAAAAAGGGAAATTCGGAT
AAAAAGGTTAATTTTAGTATCAAATTTGGAAGGCTAAATGAAGGAGAACATTTGGCTGCA
GGATGGCCTGTTTGGCTAACCGCCATTGCCTCTGAAGCTATTGAGGGATGGATGCCCCTT
AAATCAGATGCCTTTCAGAAATTAGAAAAGATTGGACAAGGGACATACAGCAGTGTTTAT
CGTGCACGTGATGTCGAAACTGGTAAAATGGTTGCCCTGAAGAAGGTGAAATTTGACAAT
TTCCAGCCAGAAAGTGTCAGATTTATGGCTCGAGAAATAACAGTTCTACGCAAACTTGAC
CATCCAAATGTCATGAAGCTGTTGGGAATAGTTACTTCTCGGTTATCATGCTGCATATAC
CTTGTTTTTGAATACATGGAACATGACCTCTCTGGACTGTTGTCATGTCCTGACGTCAAG
TTCACCGATTCACAGATTAAATGCTATATGCAGCAGCTGTTGAGTGGACTAGAGCATTGT
CATTCCCGAGGTATAATGCATCGGGATATTAAAGCTTCCAATGTTTTGGTAAACAATGAA
GGAATTTTAAAGATAGCAGATTTTGGTCTAGCAAATTTCCTTAGTGCTAGACACAAACAA
CCACTAACAAGCCGTGTGGTGACTTTATGGTATCGACCTCCTGAACTTCTCTTGGGATCA
ACAAGTTATGGGCTAACGGTGGATTTGTGGAGTGCTGGTTGTGTTTTTGCAGAACTGTTC
TTTGGGAGGCCTTTCTTAAAAGGGAGGACTGAGGTTGAACAATTGCATAAAATCTTCAAA
CTATGTGGTTCTCCATCTGAGGATTACTGGAAAAAATCTAGACTTCCACTAGCAACTATT
TTTAAACCTCAACATCCTTATGAGAGTGTGCTTCGAGATAGATGTAAAGAATTACCAAAA
ACTGCTGTCAACCTTATAGAAACGCTTCTTTCAATTGATCCTCATAAACGTGGAGCTGCT
TCATCTGCTCTTGATTCTGTGTATTTCAATACAAAGCCTTACGCATGTACGCCGTCTAGC
TTGCCTAAGTATCCACCGAACAAGGAAATTGATGCAAAGTTCCGAGAAGAAGCAAGGAGA
AAGAGGGCCAGTTCCACAGTGAGAGCATCTGGAGCTTCAAGAAATTCAAGAAAGGTGCAA
AAGTCGCTTCAAGAATCGAGAAACTTTGGCATAGTCTCAACAGAGGAAGCTGAAGCTAAT
ATCCATAATGGTCGTCGAAACATTGGTGGTAGTGGCCATATTTCTAAAGGAAAAGGAGCT
ACTGTGGCACGCATATCAATGAAATCATCTTATGATACAGTGTCAGAGGCTTCTCAGACG
ACCGAAGAATCTCAAGGGGAGAGCATCCGATCTGTCCCTGCGCAAACAGCTTCAAGTGGC
ACTGCATGGGCCAAAATGAGAAAGCAAGATTCTGCAGCCTCAAGGCCCCATCCACAGGCC
AACTCAAAAAGTCAAAAGTTGATTGCCTTTGACACATCTAGTGTACTACACTCAGCCGAT
ACCTTGGATTTAAACATGCCAGGTAATAATGACTTTTCGAGCAGGATCAACAACGAAGCC
AGAGGCTGCAACAATGATGCAAAGCATTCTATTAGCAGGCAATACACTCATCATGAGCAA
CGAGATTCTTTTGGATCATCTGATATACACCAGTCTCAGGAGATATCAGAGGACTATAAT
GGCCGACAAAGAAGGGTTGTGTTCTCAGGACCATTGATACATCAGAGGAGTGATCCAAAC
CAGGATTATCAAACGCACCAAGATGGTCAGAGATCTCGGTTTTATAAAGATTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400052034
PEP Infomation

pacid=37460849 transcript=PGSC0003DMT400076796 locus=PGSC0003DMG400029868 ID=PGSC0003DMT400076796.v4.03 annot-version=v4.03
Sequence

MGCVSSKQARAHSPPPRRNSSLTTPIIINADITEHNVYHVKAGFAPLEKIKEEPEKEKKE
ESLIQRSSSNSKASKKGNSDKKVNFSIKFGRLNEGEHLAAGWPVWLTAIASEAIEGWMPL
KSDAFQKLEKIGQGTYSSVYRARDVETGKMVALKKVKFDNFQPESVRFMAREITVLRKLD
HPNVMKLLGIVTSRLSCCIYLVFEYMEHDLSGLLSCPDVKFTDSQIKCYMQQLLSGLEHC
HSRGIMHRDIKASNVLVNNEGILKIADFGLANFLSARHKQPLTSRVVTLWYRPPELLLGS
TSYGLTVDLWSAGCVFAELFFGRPFLKGRTEVEQLHKIFKLCGSPSEDYWKKSRLPLATI
FKPQHPYESVLRDRCKELPKTAVNLIETLLSIDPHKRGAASSALDSVYFNTKPYACTPSS
LPKYPPNKEIDAKFREEARRKRASSTVRASGASRNSRKVQKSLQESRNFGIVSTEEAEAN
IHNGRRNIGGSGHISKGKGATVARISMKSSYDTVSEASQTTEESQGESIRSVPAQTASSG
TAWAKMRKQDSAASRPHPQANSKSQKLIAFDTSSVLHSADTLDLNMPGNNDFSSRINNEA
RGCNNDAKHSISRQYTHHEQRDSFGSSDIHQSQEISEDYNGRQRRVVFSGPLIHQRSDPN
QDYQTHQDGQRSRFYKDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400076796
Transcript Infomation

pacid=37460849 locus=PGSC0003DMG400029868 ID=PGSC0003DMT400076796.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTGTCAGCTCCAAGCAGGCCAGAGCCCATTCTCCGCCCCCACGACGCAATTCT
TCTCTAACAACTCCTATTATTATTAATGCTGATATTACTGAACACAATGTGTACCATGTC
AAGGCTGGATTTGCACCTCTGGAGAAGATCAAAGAGGAACCCGAAAAGGAGAAGAAGGAA
GAATCGTTAATCCAACGAAGCTCCTCCAATTCTAAGGCTTCGAAAAAGGGAAATTCGGAT
AAAAAGGTTAATTTTAGTATCAAATTTGGAAGGCTAAATGAAGGAGAACATTTGGCTGCA
GGATGGCCTGTTTGGCTAACCGCCATTGCCTCTGAAGCTATTGAGGGATGGATGCCCCTT
AAATCAGATGCCTTTCAGAAATTAGAAAAGATTGGACAAGGGACATACAGCAGTGTTTAT
CGTGCACGTGATGTCGAAACTGGTAAAATGGTTGCCCTGAAGAAGGTGAAATTTGACAAT
TTCCAGCCAGAAAGTGTCAGATTTATGGCTCGAGAAATAACAGTTCTACGCAAACTTGAC
CATCCAAATGTCATGAAGCTGTTGGGAATAGTTACTTCTCGGTTATCATGCTGCATATAC
CTTGTTTTTGAATACATGGAACATGACCTCTCTGGACTGTTGTCATGTCCTGACGTCAAG
TTCACCGATTCACAGATTAAATGCTATATGCAGCAGCTGTTGAGTGGACTAGAGCATTGT
CATTCCCGAGGTATAATGCATCGGGATATTAAAGCTTCCAATGTTTTGGTAAACAATGAA
GGAATTTTAAAGATAGCAGATTTTGGTCTAGCAAATTTCCTTAGTGCTAGACACAAACAA
CCACTAACAAGCCGTGTGGTGACTTTATGGTATCGACCTCCTGAACTTCTCTTGGGATCA
ACAAGTTATGGGCTAACGGTGGATTTGTGGAGTGCTGGTTGTGTTTTTGCAGAACTGTTC
TTTGGGAGGCCTTTCTTAAAAGGGAGGACTGAGGTTGAACAATTGCATAAAATCTTCAAA
CTATGTGGTTCTCCATCTGAGGATTACTGGAAAAAATCTAGACTTCCACTAGCAACTATT
TTTAAACCTCAACATCCTTATGAGAGTGTGCTTCGAGATAGATGTAAAGAATTACCAAAA
ACTGCTGTCAACCTTATAGAAACGCTTCTTTCAATTGATCCTCATAAACGTGGAGCTGCT
TCATCTGCTCTTGATTCTGTGTATTTCAATACAAAGCCTTACGCATGTACGCCGTCTAGC
TTGCCTAAGTATCCACCGAACAAGGAAATTGATGCAAAGTTCCGAGAAGAAGCAAGGAGA
AAGAGGGCCAGTTCCACAGTGAGAGCATCTGGAGCTTCAAGAAATTCAAGAAAGGTGCAA
AAGTCGCTTCAAGAATCGAGAAACTTTGGCATAGTCTCAACAGAGGAAGCTGAAGCTAAT
ATCCATAATGGTCGTCGAAACATTGGTGGTAGTGGCCATATTTCTAAAGGAAAAGGAGCT
ACTGTGGCACGCATATCAATGAAATCATCTTATGATACAGTGTCAGAGGCTTCTCAGACG
ACCGAAGAATCTCAAGGGGAGAGCATCCGATCTGTCCCTGCGCAAACAGCTTCAAGTGGC
ACTGCATGGGCCAAAATGAGAAAGCAAGATTCTGCAGCCTCAAGGCCCCATCCACAGGCC
AACTCAAAAAGTCAAAAGTTGATTGCCTTTGACACATCTAGTGTACTACACTCAGCCGAT
ACCTTGGATTTAAACATGCCAGGTAATAATGACTTTTCGAGCAGGATCAACAACGAAGCC
AGAGGCTGCAACAATGATGCAAAGCATTCTATTAGCAGGCAATACACTCATCATGAGCAA
CGAGATTCTTTTGGATCATCTGATATACACCAGTCTCAGGAGATATCAGAGGACTATAAT
GGCCGACAAAGAAGGGTTGTGTTCTCAGGACCATTGATACATCAGAGGAGTGATCCAAAC
CAGGATTATCAAACGCACCAAGATGGTCAGAGATCTCGGTTTTATAAAGATTTGTAA