Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076712
CDS Infomation

pacid=37478786 polypeptide=PGSC0003DMP400051983 locus=PGSC0003DMG400029835 ID=PGSC0003DMT400076712.v4.03 annot-version=v4.03
Sequence

ATGGCTCCACCGTTCATATTTCCCCCAAATTTATACTCTCTGGAAGAAGAAGAGTCCGAT
AGCAACCGTCTCTCAGTTCAAAATCCCACTTCACTGAGCAACCTCCGTCCTTCTGAATTG
GAAGAATTCGTCAAAGGCGTCTCCTTTGACCTATCGGACAAAGAGCTATTCTGTGTGGAG
GAGCATGATGTGTTTGACCGTGTGTATTCACTGGTGAAGGAGTTTGCTTGCCTTACTCCA
GGCTGTAAGCTCAATTTGGTGGAGTCTCTTAGGTCCAATCTCAGTGTTCTGCTCCCCACT
GTGGATTCCCTCTTGAGGGTATCTCAGCAGAAGGATGGAAATGCTGATGATGAGAAGAAT
GATAGTGAGGAGGATGAGTGTTCGCTTGCTGATAGAGTTGCATCATATCGAAATGCTTTC
AAAATATACACTTTCTTCCTCATTCACATTGTGCTCATTGAGGAGTCTAAATCTAGTTCT
AACAACAGCACAAAAGTGGTCGCTAGTAGTCGAAAGAAGCAACTTGTTAGTGCATGGAAT
TGGGAGCCACAAAGGGCAAGGATACTGAATTCAGTTGCAAATTCATTAGAGATCAACCTC
TCGTTGCTCTTTGGATCATCAGACCCTGATGAAAATTACTTGTCCTTCCTTGTGAAAAAT
GCTTTTTTGGTGTTTGAGAATGCAGTAGTCTTAAAAGATTCAGAGACAAAAGATGCGTTG
ACTCGCATAATCGGGACATGTGCTACCAAATACCACTATGCTGCACAATCATGTGCTTCA
ATTTTGCACCTGGTTCACAAATTAGATTTTGCAGTTTCCCATTTGGCTGATGCAGTTGCT
TGGGCTGAAAAGAAGTATGCCGATGGTAGCATGGCTTCTTCTCTTATCAGAGAGATAGGA
AGGACAGCCCCGAAAGATTATGTGAAGGATACAGTAGGGGCTGAAAATGTTGGGCGCTTT
CTTGTCGAGCTCGCTGATAGAATGCCTAAGTTGATCTCAATTAATATTGGCTTATTAATC
CCACATTTTGGAGGTGAATCTTATAAGATGAGAAATGCTCTTGTTGGGGTGTTGGGTAAG
TTGGTCATGAAGGCTTTCGATGATAGTGAAGGTGAAGTGAGTTCTAAATCGATTCGTCTC
CGAACCAAGCAGGCCATGTTGGAAATCTTATTGGAACGTTGTAGGGATGTGTCAGCCTAT
ACAAGGAGTCGAGTGCTTCAGGTCTGGGCTGAATTATGTGAAGAACATTCAGTTTCAATT
GGCATGTGGAATGAGGTTGCAGAAGTAGCGGCTGGGAGGTTAGAGGATAAGAGTGCAATT
GTCAGAAAATCTGCACTGAATTTACTTATTATGATGTTGCAGCACAATCCCTTTGGACCC
CAGCTTCGAGCAGCATCTTTTGAAGCAACCTTAGAACAATACAAGAAAAAGTTAGATGAC
CTAGGACCAAAGTCTCAGCCAATAAGTGTTTTGGATGGATTGTCTTCCTGTGATGAAATT
AGCAATGAAGATGGAGAGGTCCTCAATGAGGGTGAAGAGATGAACAAGGAACAGGATGAC
AGTCTGACAGACAGCTGCTTGCCTCATGAGGAAGATATGATAGGCCAGACAGATGATTCT
GTGCCAGATTTTGGGAATTTGGAGCAAACAAGGACCTTGGTTGCATCGCTGGAGGCAGGC
TTGAGATTCTCCAATTGTGTGTCCGCCACAATGCCAACCCTTGTCCAATTAATGGCTTCA
TCTTCTGCCACAGATGTGGAGAACACAATTCTTCTACTGATGAGATGCAGACAGTTCCAA
ATAGATGGTTCAGAAGCCTGCCTCCGGAAAATGTTGCCACTGGTATTTTCACAAGACAAA
GCAATTTATGAAGCTGTTGAGAATGCTTTCATTACAATATATGTAAGGAAGAACCCAGAG
GAAACTGCTAAGAATCTCTTGAATCTTGCTATCGATACAAATATTGGAGATCTTGCTTCA
CTGGAGTTCCTGATTGGAGCCTTAATGTCCAAGGGAGACTTAACGAGCAGCACATTGTCA
GCATTATGGGATTTCTTCTGTTTCAATATTGCTGGAACAAGTGCAGAGCAAAGTCGTGGT
GCTTTATCTATTTTATGCATGGCAGCAAAAACATCAAATTCTGTTCTCAGCTCTCACTTA
CAAGACATCATTGACATAGGCTTTGGGCGTTGGGCAAAAGTGGAACCTTTACTTGCTAGG
ACAGCATGCCTTGCTCTTCAGAGGCTGTCTGAAGAGGACAAGAAAAAATTGTTAACCACT
AATGGAAATCGGGTTTTCAGTATCTTAGAAAGCTTAGTTATTGGATTTTGGCTTCCTGAG
CATATATGGTATGCTGCTGCAGATAGAGCAATAGCTACCATATATACTATCCATCCGTAT
CCCGACAAAATGGCTGCTGATCTGGTGAAGAAAGCTCTTAGTTCTGTATTTGATTGCAGT
GGAGGGGATGAGCTCCAAAATGGTAGCTCCAACATGCTAACCACAGTTCAAGTGACAAAA
CTCAGCAGGCTTCTTTTTGTTGTTAGCCATGTAGCTTTGAATCAATTGGTTTACATTGAG
TCTTGGGTCCGCAAGATTCAGAAAGATAAAGTAAAGAGAGAGAAAATGATTACGGAAGAT
AAGGGTGATTCCACAGATAATACTGGTCCACAGAAGGACAATGGTATCAATGCAGAACTA
GGCCTAGCAGCTTCTGAAGATGCATTCCTCGATACACTATCTGAAAGAGCAGAGAAAGAA
ATTGTATCTGGATGTTCCTCTGAAAGAAATTTGATTGGCCATTGCACACCTTTTCTTTCT
AAACTCTGTAGGAATTACAGTTTGATGCAGAAGTACCCTGAACTACAAGCATCTGGAATG
CTTGCATTATGCCGATTTATGATAATTGATGCCGACTTCTGTGATGCAAATCTCCAGCTT
CTTTTCACTGTTGTGGAGAATGCACCATCTGAAACAGTTCGATCAAATTGCACTGTTGCT
CTTGGAGATCTGGCAGTTCGTTTTCCTAATCTGTTAGAGCCATGGACAGAGCATATGTAT
GCACGATTAAGAGATCCATCAGTTTCTGTGCGAAAGAATGCTGTATTGGTTCTTTCTCAT
CTGATATTGAATGACATGATGAAGGTGAAAGGTTATATCAATGAAATGGCCATCTGTTTG
GAAGATGAAGATGAAAGAATTTCAAGTCTTGCCAAACTTTTCTTTCATGAGTTGTCAAAG
AAAGGGAACAATCCAGTTTATAACCTACTTCCAGATATCCTTGGCAAGTTATCTAGCCAG
AACTTGAAGGAAGAATCATTCTGCAACATCATGCAATTTTTAATTACTTCAATTAAGAAG
GACAAGCAAATGGAAGCTCTTGTCGAGAAGCTTTGCAATAGATTCTGTGGAGTTACTGAT
GTTAGGTTATGTGAATACATCTCCTATTGCCTTTCTCAGCTATCGTACACTGATAAGAGC
ATGAGAAAGTTGATAGAGTTGTTTAAGACTTATGAACATGCCTTATCTGAAGACTCTGTG
ATGGATAATTTTAGAACTATTATCAACAAGGGAAAGAAGTTTGCTAAACCTGAACTCAAA
TCATGCATTGAGGAGTTTGAAGAAAAGTTGAATAAGTTCCACATCGAGAGGAAGGAACAA
GAACTTACCACAAAAAATGCTCAAAGCCATCAACAGAAAGTGGAGAGCTTGGAGAGCATC
ACGGTGACTGAAAAAGAAGAAGAGGAAATTGATGAATCTGAAATTACTGAAGATTCTGAA
GTCACTGATCCATCAATGGAAGCGCAAACAGAATGTTCACCTTCAGAACCAGGATGTGCT
GAGTCAGAAGCTAACTCTCATGCTTCCAGTGAGGTGACTGATTCAACAAGTGATGAAAAT
GAAGTTCAATCTCCTATAAGTCGCAGCAGAGGTGCCACTAAATCCAGAGCTAAGAACAGC
AATAGAAGTGATCAAAGTCTTGATACTTCCAATTCCACAAGAAGAATAACCAGGTCCAGG
CGAAGGTCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400051983
PEP Infomation

pacid=37478786 transcript=PGSC0003DMT400076712 locus=PGSC0003DMG400029835 ID=PGSC0003DMT400076712.v4.03 annot-version=v4.03
Sequence

MAPPFIFPPNLYSLEEEESDSNRLSVQNPTSLSNLRPSELEEFVKGVSFDLSDKELFCVE
EHDVFDRVYSLVKEFACLTPGCKLNLVESLRSNLSVLLPTVDSLLRVSQQKDGNADDEKN
DSEEDECSLADRVASYRNAFKIYTFFLIHIVLIEESKSSSNNSTKVVASSRKKQLVSAWN
WEPQRARILNSVANSLEINLSLLFGSSDPDENYLSFLVKNAFLVFENAVVLKDSETKDAL
TRIIGTCATKYHYAAQSCASILHLVHKLDFAVSHLADAVAWAEKKYADGSMASSLIREIG
RTAPKDYVKDTVGAENVGRFLVELADRMPKLISINIGLLIPHFGGESYKMRNALVGVLGK
LVMKAFDDSEGEVSSKSIRLRTKQAMLEILLERCRDVSAYTRSRVLQVWAELCEEHSVSI
GMWNEVAEVAAGRLEDKSAIVRKSALNLLIMMLQHNPFGPQLRAASFEATLEQYKKKLDD
LGPKSQPISVLDGLSSCDEISNEDGEVLNEGEEMNKEQDDSLTDSCLPHEEDMIGQTDDS
VPDFGNLEQTRTLVASLEAGLRFSNCVSATMPTLVQLMASSSATDVENTILLLMRCRQFQ
IDGSEACLRKMLPLVFSQDKAIYEAVENAFITIYVRKNPEETAKNLLNLAIDTNIGDLAS
LEFLIGALMSKGDLTSSTLSALWDFFCFNIAGTSAEQSRGALSILCMAAKTSNSVLSSHL
QDIIDIGFGRWAKVEPLLARTACLALQRLSEEDKKKLLTTNGNRVFSILESLVIGFWLPE
HIWYAAADRAIATIYTIHPYPDKMAADLVKKALSSVFDCSGGDELQNGSSNMLTTVQVTK
LSRLLFVVSHVALNQLVYIESWVRKIQKDKVKREKMITEDKGDSTDNTGPQKDNGINAEL
GLAASEDAFLDTLSERAEKEIVSGCSSERNLIGHCTPFLSKLCRNYSLMQKYPELQASGM
LALCRFMIIDADFCDANLQLLFTVVENAPSETVRSNCTVALGDLAVRFPNLLEPWTEHMY
ARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYINEMAICLEDEDERISSLAKLFFHELSK
KGNNPVYNLLPDILGKLSSQNLKEESFCNIMQFLITSIKKDKQMEALVEKLCNRFCGVTD
VRLCEYISYCLSQLSYTDKSMRKLIELFKTYEHALSEDSVMDNFRTIINKGKKFAKPELK
SCIEEFEEKLNKFHIERKEQELTTKNAQSHQQKVESLESITVTEKEEEEIDESEITEDSE
VTDPSMEAQTECSPSEPGCAESEANSHASSEVTDSTSDENEVQSPISRSRGATKSRAKNS
NRSDQSLDTSNSTRRITRSRRRS*

Transcript Sequence

Transcript ID

PGSC0003DMT400076712
Transcript Infomation

pacid=37478786 locus=PGSC0003DMG400029835 ID=PGSC0003DMT400076712.v4.03 annot-version=v4.03
Sequence

ATGGCTCCACCGTTCATATTTCCCCCAAATTTATACTCTCTGGAAGAAGAAGAGTCCGAT
AGCAACCGTCTCTCAGTTCAAAATCCCACTTCACTGAGCAACCTCCGTCCTTCTGAATTG
GAAGAATTCGTCAAAGGCGTCTCCTTTGACCTATCGGACAAAGAGCTATTCTGTGTGGAG
GAGCATGATGTGTTTGACCGTGTGTATTCACTGGTGAAGGAGTTTGCTTGCCTTACTCCA
GGCTGTAAGCTCAATTTGGTGGAGTCTCTTAGGTCCAATCTCAGTGTTCTGCTCCCCACT
GTGGATTCCCTCTTGAGGGTATCTCAGCAGAAGGATGGAAATGCTGATGATGAGAAGAAT
GATAGTGAGGAGGATGAGTGTTCGCTTGCTGATAGAGTTGCATCATATCGAAATGCTTTC
AAAATATACACTTTCTTCCTCATTCACATTGTGCTCATTGAGGAGTCTAAATCTAGTTCT
AACAACAGCACAAAAGTGGTCGCTAGTAGTCGAAAGAAGCAACTTGTTAGTGCATGGAAT
TGGGAGCCACAAAGGGCAAGGATACTGAATTCAGTTGCAAATTCATTAGAGATCAACCTC
TCGTTGCTCTTTGGATCATCAGACCCTGATGAAAATTACTTGTCCTTCCTTGTGAAAAAT
GCTTTTTTGGTGTTTGAGAATGCAGTAGTCTTAAAAGATTCAGAGACAAAAGATGCGTTG
ACTCGCATAATCGGGACATGTGCTACCAAATACCACTATGCTGCACAATCATGTGCTTCA
ATTTTGCACCTGGTTCACAAATTAGATTTTGCAGTTTCCCATTTGGCTGATGCAGTTGCT
TGGGCTGAAAAGAAGTATGCCGATGGTAGCATGGCTTCTTCTCTTATCAGAGAGATAGGA
AGGACAGCCCCGAAAGATTATGTGAAGGATACAGTAGGGGCTGAAAATGTTGGGCGCTTT
CTTGTCGAGCTCGCTGATAGAATGCCTAAGTTGATCTCAATTAATATTGGCTTATTAATC
CCACATTTTGGAGGTGAATCTTATAAGATGAGAAATGCTCTTGTTGGGGTGTTGGGTAAG
TTGGTCATGAAGGCTTTCGATGATAGTGAAGGTGAAGTGAGTTCTAAATCGATTCGTCTC
CGAACCAAGCAGGCCATGTTGGAAATCTTATTGGAACGTTGTAGGGATGTGTCAGCCTAT
ACAAGGAGTCGAGTGCTTCAGGTCTGGGCTGAATTATGTGAAGAACATTCAGTTTCAATT
GGCATGTGGAATGAGGTTGCAGAAGTAGCGGCTGGGAGGTTAGAGGATAAGAGTGCAATT
GTCAGAAAATCTGCACTGAATTTACTTATTATGATGTTGCAGCACAATCCCTTTGGACCC
CAGCTTCGAGCAGCATCTTTTGAAGCAACCTTAGAACAATACAAGAAAAAGTTAGATGAC
CTAGGACCAAAGTCTCAGCCAATAAGTGTTTTGGATGGATTGTCTTCCTGTGATGAAATT
AGCAATGAAGATGGAGAGGTCCTCAATGAGGGTGAAGAGATGAACAAGGAACAGGATGAC
AGTCTGACAGACAGCTGCTTGCCTCATGAGGAAGATATGATAGGCCAGACAGATGATTCT
GTGCCAGATTTTGGGAATTTGGAGCAAACAAGGACCTTGGTTGCATCGCTGGAGGCAGGC
TTGAGATTCTCCAATTGTGTGTCCGCCACAATGCCAACCCTTGTCCAATTAATGGCTTCA
TCTTCTGCCACAGATGTGGAGAACACAATTCTTCTACTGATGAGATGCAGACAGTTCCAA
ATAGATGGTTCAGAAGCCTGCCTCCGGAAAATGTTGCCACTGGTATTTTCACAAGACAAA
GCAATTTATGAAGCTGTTGAGAATGCTTTCATTACAATATATGTAAGGAAGAACCCAGAG
GAAACTGCTAAGAATCTCTTGAATCTTGCTATCGATACAAATATTGGAGATCTTGCTTCA
CTGGAGTTCCTGATTGGAGCCTTAATGTCCAAGGGAGACTTAACGAGCAGCACATTGTCA
GCATTATGGGATTTCTTCTGTTTCAATATTGCTGGAACAAGTGCAGAGCAAAGTCGTGGT
GCTTTATCTATTTTATGCATGGCAGCAAAAACATCAAATTCTGTTCTCAGCTCTCACTTA
CAAGACATCATTGACATAGGCTTTGGGCGTTGGGCAAAAGTGGAACCTTTACTTGCTAGG
ACAGCATGCCTTGCTCTTCAGAGGCTGTCTGAAGAGGACAAGAAAAAATTGTTAACCACT
AATGGAAATCGGGTTTTCAGTATCTTAGAAAGCTTAGTTATTGGATTTTGGCTTCCTGAG
CATATATGGTATGCTGCTGCAGATAGAGCAATAGCTACCATATATACTATCCATCCGTAT
CCCGACAAAATGGCTGCTGATCTGGTGAAGAAAGCTCTTAGTTCTGTATTTGATTGCAGT
GGAGGGGATGAGCTCCAAAATGGTAGCTCCAACATGCTAACCACAGTTCAAGTGACAAAA
CTCAGCAGGCTTCTTTTTGTTGTTAGCCATGTAGCTTTGAATCAATTGGTTTACATTGAG
TCTTGGGTCCGCAAGATTCAGAAAGATAAAGTAAAGAGAGAGAAAATGATTACGGAAGAT
AAGGGTGATTCCACAGATAATACTGGTCCACAGAAGGACAATGGTATCAATGCAGAACTA
GGCCTAGCAGCTTCTGAAGATGCATTCCTCGATACACTATCTGAAAGAGCAGAGAAAGAA
ATTGTATCTGGATGTTCCTCTGAAAGAAATTTGATTGGCCATTGCACACCTTTTCTTTCT
AAACTCTGTAGGAATTACAGTTTGATGCAGAAGTACCCTGAACTACAAGCATCTGGAATG
CTTGCATTATGCCGATTTATGATAATTGATGCCGACTTCTGTGATGCAAATCTCCAGCTT
CTTTTCACTGTTGTGGAGAATGCACCATCTGAAACAGTTCGATCAAATTGCACTGTTGCT
CTTGGAGATCTGGCAGTTCGTTTTCCTAATCTGTTAGAGCCATGGACAGAGCATATGTAT
GCACGATTAAGAGATCCATCAGTTTCTGTGCGAAAGAATGCTGTATTGGTTCTTTCTCAT
CTGATATTGAATGACATGATGAAGGTGAAAGGTTATATCAATGAAATGGCCATCTGTTTG
GAAGATGAAGATGAAAGAATTTCAAGTCTTGCCAAACTTTTCTTTCATGAGTTGTCAAAG
AAAGGGAACAATCCAGTTTATAACCTACTTCCAGATATCCTTGGCAAGTTATCTAGCCAG
AACTTGAAGGAAGAATCATTCTGCAACATCATGCAATTTTTAATTACTTCAATTAAGAAG
GACAAGCAAATGGAAGCTCTTGTCGAGAAGCTTTGCAATAGATTCTGTGGAGTTACTGAT
GTTAGGTTATGTGAATACATCTCCTATTGCCTTTCTCAGCTATCGTACACTGATAAGAGC
ATGAGAAAGTTGATAGAGTTGTTTAAGACTTATGAACATGCCTTATCTGAAGACTCTGTG
ATGGATAATTTTAGAACTATTATCAACAAGGGAAAGAAGTTTGCTAAACCTGAACTCAAA
TCATGCATTGAGGAGTTTGAAGAAAAGTTGAATAAGTTCCACATCGAGAGGAAGGAACAA
GAACTTACCACAAAAAATGCTCAAAGCCATCAACAGAAAGTGGAGAGCTTGGAGAGCATC
ACGGTGACTGAAAAAGAAGAAGAGGAAATTGATGAATCTGAAATTACTGAAGATTCTGAA
GTCACTGATCCATCAATGGAAGCGCAAACAGAATGTTCACCTTCAGAACCAGGATGTGCT
GAGTCAGAAGCTAACTCTCATGCTTCCAGTGAGGTGACTGATTCAACAAGTGATGAAAAT
GAAGTTCAATCTCCTATAAGTCGCAGCAGAGGTGCCACTAAATCCAGAGCTAAGAACAGC
AATAGAAGTGATCAAAGTCTTGATACTTCCAATTCCACAAGAAGAATAACCAGGTCCAGG
CGAAGGTCCTAA