Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076711
CDS Infomation

pacid=37479708 polypeptide=PGSC0003DMP400051982 locus=PGSC0003DMG400029834 ID=PGSC0003DMT400076711.v4.03 annot-version=v4.03
Sequence

ATGCCTCAACTTTGGACTACTTGTTCCCATTTGGTTGCAAAATCAGGTCTTCCACCTGAA
ATCTTAGCGAAACACCTTCCTATTGATGTTGTCGCGAAAATCGAGGAAATTCGCCTTAAA
ACATCATTAGCGCGAAGATCCTTGATCTCTCATCATCACCATCACCAGCACGACCTAAGT
ACGGCCTCGGAGCTCGAGGACCAAAAAATCCGACGAATGAGACGAGCCCTTGACTCATCC
GACGTTGAATTAGTCAAACTTATGGTCATGGGAGAAGGACTAAATCTCGATGAATCGATC
GCGTTGCATTACGCGGTCGAGAATTGTAGCCGGGAGGTTGTGAAAACGTTACTCGAGCTC
GGTGCAGCCAACGTGAACCACCCGGCTGGTCCAGCTGGCAAAACCCCCCTCCACATTGCA
TCCGAAATGGTGTCCCCCGACATGGTGGCAGTCCTACTAGACCACCACGCGGATCCTAAT
GTTAGAACGATGGATGGGATCACTCCACTCGATATTCTACGAACCCTAACTTCCGATTTC
CTATTCAAAGGTGCTGTCCCGGGGCTCAATCACATTGAACCTAACAAATTAAGACTTTGC
CTTGAGCTAGTTCAATCGGCCGCGATGGTAATTTCTCGAGAGGAAGAAAATACAAACAAC
GTTCCATCTTCTACCGCGATATTCCAACCTATAAACAACGAAGATCATGGTTCTAGCGCG
ACCAATGTGGGAAGTAATAACCTCAATCTAGACTCGAGGATGGTGTATTTGAATCTAGGT
GCTGGTACTTCGATTTCACAACAAATGGGGTGCAACAGAATGACGAACGAGGATGATCAT
GCTAATAGTCACAATAAACAAAATAGGCATAGTGGATTTGACCCATCGTCGATGTATCGT
CCATATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400051982
PEP Infomation

pacid=37479708 transcript=PGSC0003DMT400076711 locus=PGSC0003DMG400029834 ID=PGSC0003DMT400076711.v4.03 annot-version=v4.03
Sequence

MPQLWTTCSHLVAKSGLPPEILAKHLPIDVVAKIEEIRLKTSLARRSLISHHHHHQHDLS
TASELEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDESIALHYAVENCSREVVKTLLEL
GAANVNHPAGPAGKTPLHIASEMVSPDMVAVLLDHHADPNVRTMDGITPLDILRTLTSDF
LFKGAVPGLNHIEPNKLRLCLELVQSAAMVISREEENTNNVPSSTAIFQPINNEDHGSSA
TNVGSNNLNLDSRMVYLNLGAGTSISQQMGCNRMTNEDDHANSHNKQNRHSGFDPSSMYR
PY*

Transcript Sequence

Transcript ID

PGSC0003DMT400076711
Transcript Infomation

pacid=37479708 locus=PGSC0003DMG400029834 ID=PGSC0003DMT400076711.v4.03 annot-version=v4.03
Sequence

ATGCCTCAACTTTGGACTACTTGTTCCCATTTGGTTGCAAAATCAGGTCTTCCACCTGAA
ATCTTAGCGAAACACCTTCCTATTGATGTTGTCGCGAAAATCGAGGAAATTCGCCTTAAA
ACATCATTAGCGCGAAGATCCTTGATCTCTCATCATCACCATCACCAGCACGACCTAAGT
ACGGCCTCGGAGCTCGAGGACCAAAAAATCCGACGAATGAGACGAGCCCTTGACTCATCC
GACGTTGAATTAGTCAAACTTATGGTCATGGGAGAAGGACTAAATCTCGATGAATCGATC
GCGTTGCATTACGCGGTCGAGAATTGTAGCCGGGAGGTTGTGAAAACGTTACTCGAGCTC
GGTGCAGCCAACGTGAACCACCCGGCTGGTCCAGCTGGCAAAACCCCCCTCCACATTGCA
TCCGAAATGGTGTCCCCCGACATGGTGGCAGTCCTACTAGACCACCACGCGGATCCTAAT
GTTAGAACGATGGATGGGATCACTCCACTCGATATTCTACGAACCCTAACTTCCGATTTC
CTATTCAAAGGTGCTGTCCCGGGGCTCAATCACATTGAACCTAACAAATTAAGACTTTGC
CTTGAGCTAGTTCAATCGGCCGCGATGGTAATTTCTCGAGAGGAAGAAAATACAAACAAC
GTTCCATCTTCTACCGCGATATTCCAACCTATAAACAACGAAGATCATGGTTCTAGCGCG
ACCAATGTGGGAAGTAATAACCTCAATCTAGACTCGAGGATGGTGTATTTGAATCTAGGT
GCTGGTACTTCGATTTCACAACAAATGGGGTGCAACAGAATGACGAACGAGGATGATCAT
GCTAATAGTCACAATAAACAAAATAGGCATAGTGGATTTGACCCATCGTCGATGTATCGT
CCATATTGA