Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076708
CDS Infomation

pacid=37477369 polypeptide=PGSC0003DMP400051979 locus=PGSC0003DMG400029832 ID=PGSC0003DMT400076708.v4.03 annot-version=v4.03
Sequence

ATGGATATAAGTAATGAGGCTACTATTGACTTCTTTGCTATTGGACCTTCTACGATATTG
GGTCGAACAATTGCCTTTAGAGTCTTGTTTTGCAAGTCGATTACGCAGTTGAGGCATCGT
TTGTTTCATTTCTTGGTGTATTACTTGTACAAGTTTAAGAATGGATTTTCGTACTACGTG
ACACCTTTGATTTCGTGGTTGCACCCTCGAAATCCACAAGGGATATTGGCATTAGTAACG
CTTCTCGCCTTCTTGTTGAGGCGGTATACTAATGTAAAAGTTAAGGCTGAGATGGCTTAT
AGGAGGAAGTTTTGGAGGAATATGATGAGATCTGCCTTGACTTATGAGGAGTGGGCTCAT
GCTGCTAAGATGTTGGATAAAGAGACACCTAAATTGAATGAGGCAGATCTTTATGATGAA
GAATTAGTTCGAAATAAACTTCAAGAGCTTCGACATCGTAGGCAAGAGGGTTCTCTAAGA
GATATCATTTTCTGTATGAGAGCTGACCTTGTAAGGAATCTTGGTAATATGTGCAATTCA
GAACTTCACAAGGGAAGGCTTCATGTGCCTAAACTTATTAAGGAATATATTGATGAGGTT
TCAACTCAGTTGAAAATGGTATGCGACTCTGATTCAGAGGAGCTTCTGTTGGAAGAGAAG
CTTGCTTTCATGCATGAAACAAGACATGCCTTTGGTAGGACGGCTTTGCTTTTAAGTGGA
GGTGCCTCTCTAGGAGCTTTCCATGTTGGTGTGGTGAAAACGCTTGTAGAACACAAGCTT
CTGCCACGGATAATTGCTGGTTCAAGTGTCGGATCGATTATGTGCTCCATAGTTGCGACT
CGATCTTGGCCTGAGCTCCAGAGTTTTTTCGAAGACCCCTGGCACTCCTTGCAATTTTTC
GATCAGTTGGGTGGAATTTTTACTATTTTCAGGAGGGTCATGACCCAGGGTGCTGTACAT
GAGATCAGACAGCTGCAGGTGCTTTTACGCAATCTCACGAATAATCTTACTTTCCAAGAA
GCCTATGACATGACTGGTAGAGTTCTGGGGATTACCGTTTGCTCCCCCAGGAAACATGAA
CCTCCTAGATGCTTGAATTACTTGACTTCACCTCATATTGTTATATGGAGTGCTGTGACT
GCTTCTTGTGCCTTCCCTGGTCTCTTCGAAGCTCAAGAACTGATGGCAAAGGATAGAAGT
GGAGATCTTGTTCCATATCACCCACCATTTCATTTGGGACCTGATGACGCTTCTGATGCA
TCTTCTCGTCGATGGAGGGATGGTAGCTTGGAGGTAGATTTGCCAATGATGCAGCTAAAG
GAGCTCTTCAATGTCAATCACTTCATTGTGAGCCAGGCGAATCCGCATATCGCTCCTTTA
CTGAGGATCAAGGAGTTTGTAAGAGCTTATGGAGGCAACTTTGCTGCCAAGCTTGCCCAG
CTTGCTGAAATGGAGGTGAAGCACAGATGCCATCAGGTGTTAGAACTTGGTTTTCCCTTG
GGAGGAATAGCAAAACTTTTTGCTCAAGATTGGGAGGGTGACGTAACTGTTGTGATGCCA
GCCACTCTAGCTCAGTACTCGAAAATCATACAGAACCCTTCTACTCTGGAGCTGCAAAAG
GCAGCAAATCAAGGAAGAAGGTGCACTTGGGAAAAACTCTCGGCCATGAAAGCAAACTGT
GGAATTGAGCTTGCACTTGATGAGTGTGTTGCTATTCTGAATCACATGCGTAGACTGAAA
AGGAGTGCCGAGAGAGCAGCTGCTGCTTCTCACGGCTTGTCAAGCACTGTCAGATTTAAT
GCTTCCAGAAGAATTCCTTCTTGGAACTGCATTGCACGAGAGAATTCAACAGGCTCCCTT
GAAGACTTTCTTGCGGATGTTGCTGCTTCACATCATCAAGGAGGCAGTGGTTCAGGGGCA
CATGCCACCCGAAATTGGCGAACACATCGTAGCACGCATGATGGCAGTGACAGTGAGCCC
GAAAATGTGGACCTTAACTCTTGGACAAGATCTGGTGGTCCTCTGATGAGGACAACATCT
GCTGATAAGTTTATCGACTTTGTCCAGAACTTGGAACTTGGTTCACGATTGAACAAAGGA
TTGACTATTGACCTCAACAATCTCGTTCCTCAGATGGCTGGTAGGGACCTGTTCTCCCCA
AGCCCAAGGGTAACAACACCAGATAGAACTTCAGACACCGAATTTGATCAAAGAGATTTC
AGTATTAGAGTCCCCGCGAGTAGTTCAAGCATTATGGTAGGTGAAGGTGACCTTCTACAG
CCTGAAAGGACTAACAACGGTATTGTCTTCAACGTGGTAAGAAAAGGAGACTTAACCCCA
TCGAATAAAAGCCTCGATTCAGAAAATAACAGTTCTGTGCAGGACACAGTTGCTGAGTGC
ATGCAACTTGACAGTCCAGAAAAGGAGATGGATATTAGCTCAGTATCTGAGGATGGTGAG
GACTACGTTGAGCAAGAAAGTGGTAAGATAAATGAAGTTGATTCCGTTCACTCTAGTGAA
AATCGTTCAACCATTGATGATGGTGAAGATAAACAAGTTATCGACAAGCAAGTTATCGAT
CATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400051979
PEP Infomation

pacid=37477369 transcript=PGSC0003DMT400076708 locus=PGSC0003DMG400029832 ID=PGSC0003DMT400076708.v4.03 annot-version=v4.03
Sequence

MDISNEATIDFFAIGPSTILGRTIAFRVLFCKSITQLRHRLFHFLVYYLYKFKNGFSYYV
TPLISWLHPRNPQGILALVTLLAFLLRRYTNVKVKAEMAYRRKFWRNMMRSALTYEEWAH
AAKMLDKETPKLNEADLYDEELVRNKLQELRHRRQEGSLRDIIFCMRADLVRNLGNMCNS
ELHKGRLHVPKLIKEYIDEVSTQLKMVCDSDSEELLLEEKLAFMHETRHAFGRTALLLSG
GASLGAFHVGVVKTLVEHKLLPRIIAGSSVGSIMCSIVATRSWPELQSFFEDPWHSLQFF
DQLGGIFTIFRRVMTQGAVHEIRQLQVLLRNLTNNLTFQEAYDMTGRVLGITVCSPRKHE
PPRCLNYLTSPHIVIWSAVTASCAFPGLFEAQELMAKDRSGDLVPYHPPFHLGPDDASDA
SSRRWRDGSLEVDLPMMQLKELFNVNHFIVSQANPHIAPLLRIKEFVRAYGGNFAAKLAQ
LAEMEVKHRCHQVLELGFPLGGIAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSTLELQK
AANQGRRCTWEKLSAMKANCGIELALDECVAILNHMRRLKRSAERAAAASHGLSSTVRFN
ASRRIPSWNCIARENSTGSLEDFLADVAASHHQGGSGSGAHATRNWRTHRSTHDGSDSEP
ENVDLNSWTRSGGPLMRTTSADKFIDFVQNLELGSRLNKGLTIDLNNLVPQMAGRDLFSP
SPRVTTPDRTSDTEFDQRDFSIRVPASSSSIMVGEGDLLQPERTNNGIVFNVVRKGDLTP
SNKSLDSENNSSVQDTVAECMQLDSPEKEMDISSVSEDGEDYVEQESGKINEVDSVHSSE
NRSTIDDGEDKQVIDKQVIDH*

Transcript Sequence

Transcript ID

PGSC0003DMT400076708
Transcript Infomation

pacid=37477369 locus=PGSC0003DMG400029832 ID=PGSC0003DMT400076708.v4.03 annot-version=v4.03
Sequence

ATGGATATAAGTAATGAGGCTACTATTGACTTCTTTGCTATTGGACCTTCTACGATATTG
GGTCGAACAATTGCCTTTAGAGTCTTGTTTTGCAAGTCGATTACGCAGTTGAGGCATCGT
TTGTTTCATTTCTTGGTGTATTACTTGTACAAGTTTAAGAATGGATTTTCGTACTACGTG
ACACCTTTGATTTCGTGGTTGCACCCTCGAAATCCACAAGGGATATTGGCATTAGTAACG
CTTCTCGCCTTCTTGTTGAGGCGGTATACTAATGTAAAAGTTAAGGCTGAGATGGCTTAT
AGGAGGAAGTTTTGGAGGAATATGATGAGATCTGCCTTGACTTATGAGGAGTGGGCTCAT
GCTGCTAAGATGTTGGATAAAGAGACACCTAAATTGAATGAGGCAGATCTTTATGATGAA
GAATTAGTTCGAAATAAACTTCAAGAGCTTCGACATCGTAGGCAAGAGGGTTCTCTAAGA
GATATCATTTTCTGTATGAGAGCTGACCTTGTAAGGAATCTTGGTAATATGTGCAATTCA
GAACTTCACAAGGGAAGGCTTCATGTGCCTAAACTTATTAAGGAATATATTGATGAGGTT
TCAACTCAGTTGAAAATGGTATGCGACTCTGATTCAGAGGAGCTTCTGTTGGAAGAGAAG
CTTGCTTTCATGCATGAAACAAGACATGCCTTTGGTAGGACGGCTTTGCTTTTAAGTGGA
GGTGCCTCTCTAGGAGCTTTCCATGTTGGTGTGGTGAAAACGCTTGTAGAACACAAGCTT
CTGCCACGGATAATTGCTGGTTCAAGTGTCGGATCGATTATGTGCTCCATAGTTGCGACT
CGATCTTGGCCTGAGCTCCAGAGTTTTTTCGAAGACCCCTGGCACTCCTTGCAATTTTTC
GATCAGTTGGGTGGAATTTTTACTATTTTCAGGAGGGTCATGACCCAGGGTGCTGTACAT
GAGATCAGACAGCTGCAGGTGCTTTTACGCAATCTCACGAATAATCTTACTTTCCAAGAA
GCCTATGACATGACTGGTAGAGTTCTGGGGATTACCGTTTGCTCCCCCAGGAAACATGAA
CCTCCTAGATGCTTGAATTACTTGACTTCACCTCATATTGTTATATGGAGTGCTGTGACT
GCTTCTTGTGCCTTCCCTGGTCTCTTCGAAGCTCAAGAACTGATGGCAAAGGATAGAAGT
GGAGATCTTGTTCCATATCACCCACCATTTCATTTGGGACCTGATGACGCTTCTGATGCA
TCTTCTCGTCGATGGAGGGATGGTAGCTTGGAGGTAGATTTGCCAATGATGCAGCTAAAG
GAGCTCTTCAATGTCAATCACTTCATTGTGAGCCAGGCGAATCCGCATATCGCTCCTTTA
CTGAGGATCAAGGAGTTTGTAAGAGCTTATGGAGGCAACTTTGCTGCCAAGCTTGCCCAG
CTTGCTGAAATGGAGGTGAAGCACAGATGCCATCAGGTGTTAGAACTTGGTTTTCCCTTG
GGAGGAATAGCAAAACTTTTTGCTCAAGATTGGGAGGGTGACGTAACTGTTGTGATGCCA
GCCACTCTAGCTCAGTACTCGAAAATCATACAGAACCCTTCTACTCTGGAGCTGCAAAAG
GCAGCAAATCAAGGAAGAAGGTGCACTTGGGAAAAACTCTCGGCCATGAAAGCAAACTGT
GGAATTGAGCTTGCACTTGATGAGTGTGTTGCTATTCTGAATCACATGCGTAGACTGAAA
AGGAGTGCCGAGAGAGCAGCTGCTGCTTCTCACGGCTTGTCAAGCACTGTCAGATTTAAT
GCTTCCAGAAGAATTCCTTCTTGGAACTGCATTGCACGAGAGAATTCAACAGGCTCCCTT
GAAGACTTTCTTGCGGATGTTGCTGCTTCACATCATCAAGGAGGCAGTGGTTCAGGGGCA
CATGCCACCCGAAATTGGCGAACACATCGTAGCACGCATGATGGCAGTGACAGTGAGCCC
GAAAATGTGGACCTTAACTCTTGGACAAGATCTGGTGGTCCTCTGATGAGGACAACATCT
GCTGATAAGTTTATCGACTTTGTCCAGAACTTGGAACTTGGTTCACGATTGAACAAAGGA
TTGACTATTGACCTCAACAATCTCGTTCCTCAGATGGCTGGTAGGGACCTGTTCTCCCCA
AGCCCAAGGGTAACAACACCAGATAGAACTTCAGACACCGAATTTGATCAAAGAGATTTC
AGTATTAGAGTCCCCGCGAGTAGTTCAAGCATTATGGTAGGTGAAGGTGACCTTCTACAG
CCTGAAAGGACTAACAACGGTATTGTCTTCAACGTGGTAAGAAAAGGAGACTTAACCCCA
TCGAATAAAAGCCTCGATTCAGAAAATAACAGTTCTGTGCAGGACACAGTTGCTGAGTGC
ATGCAACTTGACAGTCCAGAAAAGGAGATGGATATTAGCTCAGTATCTGAGGATGGTGAG
GACTACGTTGAGCAAGAAAGTGGTAAGATAAATGAAGTTGATTCCGTTCACTCTAGTGAA
AATCGTTCAACCATTGATGATGGTGAAGATAAACAAGTTATCGACAAGCAAGTTATCGAT
CATTGA