Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076670
CDS Infomation

pacid=37448280 polypeptide=PGSC0003DMP400051947 locus=PGSC0003DMG400029815 ID=PGSC0003DMT400076670.v4.03 annot-version=v4.03
Sequence

ATGGAAGATTCTCAGTCTCACTCCCACTCTCACCCTCACCAATACACCCACTCATCTCCA
CTCCCTTCCATCAATGAATCTTCTGAGCAAGTCAAATTTGCAAGCTCCGATGCTGCCTTC
TACCCCACCGTCTCCTCCTCCGTTGGATCCAACATCGGTGCTAAATATAAGCTCATGTCA
CCTGCTAAGCTCCCGATCTCTCGCTCCTCCGCATGTATCACCATCCCTCCTGGTCTCAGT
CCTTCATCCTTTCTCGAATCTCCCGTTCTTCTTTCTAACATCAAAGCTGAGCCGTCTCCG
ACCACAGGTTCCTTCTCCAAATTTCAACTAATGCAAGGCTCTAGTGGGAGTGCTGCTTTT
TCATTTATGAGAAGCTGTTCCAGTGGAAATGCATATGGTGAAACGACCGGCGAATTTGAG
TTTAAATTTGCTATTGCATCTAGTTCTACATCAGGATCACTGGCGAAGGAAGCTGCGGTG
ATTTCTGCAGGTTTCAACCAACAGCAAAGTGAACCTCTGATTCAAGTTCAAGATAGATCT
CTTTCTCAATCATTAGCACCTTCAACTCTTGTTGAAAGCGAGATGCCTGATTCAAAAGAG
CTGAGTCTACCTGCACCTGTTAGTTTAGAAGCCTCGTCAATTAGTACTTCTGCTGCTGCA
ACTGATAATGAGGAAATAAATCAGAGAGGTCAATCAAATCCAAGCTCGCAAGGGTCACAT
GCTGATAATAAAGATGTATCATCGGTAACAGCTGAGAGATCATCAGAAGATGGGTATAAC
TGGAGAAAGTATGGCCAGAAACTTGTTAAAGGAAGTGAATTCCCAAGGAGCTACTACAAA
TGTACATACCCAAACTGTGAAGTTAAAAAGATATTTGAGCGCTCTCCTGATGGACAAATA
ACAGAGATTGTGTATAAAGGTTCCCATGATCATCCTAAACCCCAGCCCAGCCGTAGGTTT
ACTCCTGGTGCGCTTACTTCCATCCAAGAAGACAGAGGTGAGAGAGATGCATGCCTAACT
GGTCAAGAAGACAAATTCAACACTAATGCCCAGACTAGTAACACTGAGCCCAGCGGTACT
CCTTTATCACCTCGACAAGCTGGTGGTGATGGTCTTGAAGGTACAGTGTCTCAGTTGCAT
AGTGCTAATGATCAGGTGGACGAGGATGATCCATTTGCAAAAAGAAGGAAAATGGATGGT
GGCATGGATATTACACCAATTGTTAAGCCTATCCGTGAACCACGCGTTGTTGTTCAAACT
GTGAGTGAAGTTGATATATTGGATGATGGATACAGGTGGCGGAAATACGGTCAAAAGGTG
GTCCGTGGTAATCCTAATCCCAGGAGTTATTACAAGTGCACCAATGCTGGATGCCCTGTC
AGGAAACATGTGGAGAGGGCTTCCCATGATCCCAAAGCTGTAATTACTACATATGAGGGG
AAACACAATCACGATGTACCAGCAGCCAGGACTAATAACCATGAAATGGCAGGATCAGCA
CCTGTAACTGGGGGTTCAAGGGTCAGGACGGAAGAAAATGGTTCAGTTAGCTTGAATCTA
GGTGTTGGTATAGGATATGGTATGGAGAATAGGCGCAATGGACAACTTCACAATCTGCCT
GCAGAAACTGTACATAGCCAAGCTCAGGTTTCAAGTTCTAGTATGATGGTAGTACAACCA
GCTACAGTTGCAGCATGCTACAACATTGTAAATGGTGGAATGAGCCGGTTTGGAACTATA
GAAAATCGTGTTCAGGGCACTGGCTTTGAGACTCTGCCTTTGCAATCATCTGCTCAATGT
CCTCAAAACTATGGAAGGATACTATTGGGGCCGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400051947
PEP Infomation

pacid=37448280 transcript=PGSC0003DMT400076670 locus=PGSC0003DMG400029815 ID=PGSC0003DMT400076670.v4.03 annot-version=v4.03
Sequence

MEDSQSHSHSHPHQYTHSSPLPSINESSEQVKFASSDAAFYPTVSSSVGSNIGAKYKLMS
PAKLPISRSSACITIPPGLSPSSFLESPVLLSNIKAEPSPTTGSFSKFQLMQGSSGSAAF
SFMRSCSSGNAYGETTGEFEFKFAIASSSTSGSLAKEAAVISAGFNQQQSEPLIQVQDRS
LSQSLAPSTLVESEMPDSKELSLPAPVSLEASSISTSAAATDNEEINQRGQSNPSSQGSH
ADNKDVSSVTAERSSEDGYNWRKYGQKLVKGSEFPRSYYKCTYPNCEVKKIFERSPDGQI
TEIVYKGSHDHPKPQPSRRFTPGALTSIQEDRGERDACLTGQEDKFNTNAQTSNTEPSGT
PLSPRQAGGDGLEGTVSQLHSANDQVDEDDPFAKRRKMDGGMDITPIVKPIREPRVVVQT
VSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEG
KHNHDVPAARTNNHEMAGSAPVTGGSRVRTEENGSVSLNLGVGIGYGMENRRNGQLHNLP
AETVHSQAQVSSSSMMVVQPATVAACYNIVNGGMSRFGTIENRVQGTGFETLPLQSSAQC
PQNYGRILLGP*

Transcript Sequence

Transcript ID

PGSC0003DMT400076670
Transcript Infomation

pacid=37448280 locus=PGSC0003DMG400029815 ID=PGSC0003DMT400076670.v4.03 annot-version=v4.03
Sequence

ATGGAAGATTCTCAGTCTCACTCCCACTCTCACCCTCACCAATACACCCACTCATCTCCA
CTCCCTTCCATCAATGAATCTTCTGAGCAAGTCAAATTTGCAAGCTCCGATGCTGCCTTC
TACCCCACCGTCTCCTCCTCCGTTGGATCCAACATCGGTGCTAAATATAAGCTCATGTCA
CCTGCTAAGCTCCCGATCTCTCGCTCCTCCGCATGTATCACCATCCCTCCTGGTCTCAGT
CCTTCATCCTTTCTCGAATCTCCCGTTCTTCTTTCTAACATCAAAGCTGAGCCGTCTCCG
ACCACAGGTTCCTTCTCCAAATTTCAACTAATGCAAGGCTCTAGTGGGAGTGCTGCTTTT
TCATTTATGAGAAGCTGTTCCAGTGGAAATGCATATGGTGAAACGACCGGCGAATTTGAG
TTTAAATTTGCTATTGCATCTAGTTCTACATCAGGATCACTGGCGAAGGAAGCTGCGGTG
ATTTCTGCAGGTTTCAACCAACAGCAAAGTGAACCTCTGATTCAAGTTCAAGATAGATCT
CTTTCTCAATCATTAGCACCTTCAACTCTTGTTGAAAGCGAGATGCCTGATTCAAAAGAG
CTGAGTCTACCTGCACCTGTTAGTTTAGAAGCCTCGTCAATTAGTACTTCTGCTGCTGCA
ACTGATAATGAGGAAATAAATCAGAGAGGTCAATCAAATCCAAGCTCGCAAGGGTCACAT
GCTGATAATAAAGATGTATCATCGGTAACAGCTGAGAGATCATCAGAAGATGGGTATAAC
TGGAGAAAGTATGGCCAGAAACTTGTTAAAGGAAGTGAATTCCCAAGGAGCTACTACAAA
TGTACATACCCAAACTGTGAAGTTAAAAAGATATTTGAGCGCTCTCCTGATGGACAAATA
ACAGAGATTGTGTATAAAGGTTCCCATGATCATCCTAAACCCCAGCCCAGCCGTAGGTTT
ACTCCTGGTGCGCTTACTTCCATCCAAGAAGACAGAGGTGAGAGAGATGCATGCCTAACT
GGTCAAGAAGACAAATTCAACACTAATGCCCAGACTAGTAACACTGAGCCCAGCGGTACT
CCTTTATCACCTCGACAAGCTGGTGGTGATGGTCTTGAAGGTACAGTGTCTCAGTTGCAT
AGTGCTAATGATCAGGTGGACGAGGATGATCCATTTGCAAAAAGAAGGAAAATGGATGGT
GGCATGGATATTACACCAATTGTTAAGCCTATCCGTGAACCACGCGTTGTTGTTCAAACT
GTGAGTGAAGTTGATATATTGGATGATGGATACAGGTGGCGGAAATACGGTCAAAAGGTG
GTCCGTGGTAATCCTAATCCCAGGAGTTATTACAAGTGCACCAATGCTGGATGCCCTGTC
AGGAAACATGTGGAGAGGGCTTCCCATGATCCCAAAGCTGTAATTACTACATATGAGGGG
AAACACAATCACGATGTACCAGCAGCCAGGACTAATAACCATGAAATGGCAGGATCAGCA
CCTGTAACTGGGGGTTCAAGGGTCAGGACGGAAGAAAATGGTTCAGTTAGCTTGAATCTA
GGTGTTGGTATAGGATATGGTATGGAGAATAGGCGCAATGGACAACTTCACAATCTGCCT
GCAGAAACTGTACATAGCCAAGCTCAGGTTTCAAGTTCTAGTATGATGGTAGTACAACCA
GCTACAGTTGCAGCATGCTACAACATTGTAAATGGTGGAATGAGCCGGTTTGGAACTATA
GAAAATCGTGTTCAGGGCACTGGCTTTGAGACTCTGCCTTTGCAATCATCTGCTCAATGT
CCTCAAAACTATGGAAGGATACTATTGGGGCCGTGA