Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076601
CDS Infomation

pacid=37449565 polypeptide=PGSC0003DMP400051894 locus=PGSC0003DMG400029787 ID=PGSC0003DMT400076601.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGGCAGAGACGTTTGCTTTCCAAGCTGAGATCAACCAGCTTTTGAGTCTCATC
ATCAATACTTTTTACAGTAACAAAGAGATCTTTCTCAGGGAACTCATTAGTAACTCTTCT
GATGCACTGGACAAGATCCGTTTTCAGAGTTTGACTGACAAGAGCAAGCTAGATGCTCAA
CCTGAACTTTTCATTCACATCATCCCCGATAAGACCAACAATACCCTCACAATCATTGAC
AGTGGTGTTGGTATGACAAAGGCTGATCTTGTGAACAACCTTGGTACAATTGCTAGGTCT
GGCACCAAGGAATTTATGGAGGCCATTGCTGCTGGTGCTGATGTAAGCATGATTGGGCAA
TTTGGTGTTGGTTTCTACTCTGCTTACTTGGTCGCTGAAAGGGTTGTTGTGACGACAAAG
CACAATGATGATGAACAATATGTTTGGGAATCTCAAGCTGGTGGTTCATTCACTGTTGCA
AGAGATACATCTGGTGAGGACCTTGGCAGAGGTACCAAAATTACCCTCTTCCTCAAGGAG
GACCAACTTGAATACCTTGAAGAGCGAAGGCTCAAGGACCTGATTAAGAAGCATTCTGAG
TTCATCAGCTATCCAATCTCTTTGTGGGTTGAGAAGACCATAGAAAAGGAAATCTCTGAT
GATGAGGACGAAGAGGAGAAGAAAGATGAGGAAGGAAAGGTAGAGGAGGTTGATGAAGAA
AAGGAGAAGGAAGAGAAGAAAAAGAAGAAAATTAAGGAAGTCTCTAATGAGTGGTCATTG
GTGAATAAGCAGAAGCCCATATGGATGAGGAAGCCTGAGGAGATCACAAAAGAGGAGTAT
GCTGCATTCTACAAGAGCCTGACAAATGATTGGGAAGAGCATTTGGCTGTCAAGCACTTC
TCTGTTGAGGGTCAGCTGGAGTTCAAGGCTGTTCTTTTTATTCCAAAGAGAGCTCCTTTT
GACCTCTTTGACACCAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTC
ATCATGGATAACTGTGAGGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTG
GATTCCGAGGACCTTCCCCTCAACATCTCTAGAGAGATGTTACAGCAGAATAAGATCCTG
AAGGTTATTCGCAAAAACTTGGTAAAGAAGTGCATTGAGCTATTCTTTGAAATCGCCGAA
AACAAAGAAGACTATGACAAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATC
CATGAGGATTCACAGAACAGGTCTAAGTTTGCTGAACTGCTGAGATATCACTCCACCAAA
AGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGGATGAAAGAAGGCCAGAAT
GATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCACCCTTCCTTGAG
AAGCTGAAGAAGAAGGGTTATGAGGTTCTTTACATGGTTGATGCTATTGATGAGTATTCA
ATTGGTCAATTGAAGGAATTTGAGGGTAAGAAGCTTGTTTCTGCTACCAAGGAAGGCCTC
AAGCTTGAGGAGACTGAAGATGAGAAGAAAAAGCACGAAGAACTAAAGGAGAAGTTTGAG
GGTCTGTGCAAGGTGATTAAGGATGTTCTAGGTGACAAGGTTGAGAAAGTGGTGGTCTCT
GACCGTGTTGTGGATTCTCCTTGCTGCTTGGTTACTGGAGAATATGGTTGGACTGCCAAC
ATGGAGAGAATTATGAAGGCACAAGCTCTCAGGGACTCTAGCATGGCTGGATACATGTCT
AGCAAGAAGACCATGGAGATAAACCCAGAGAATGCCATCATGGATGAGCTCAGGAAGAGA
GCTGATGCTGACAAGAATGACAAGTCCGTCAAGGATTTGGTTCTATTGTTGTTTGAGACT
GCTCTTCTTACCTCAGGTTTCAGCCTTGATGAGCCAAACACATTTGGCAACAGAATTCAC
AGGATGTTGAAACTTGGTCTGAGTATTGATGAGGATAGTGGAGATGCTGAAGCTGACATG
CCAGCATTGGAGGATCCTGAAGTTGATGCTGAGGGCAGCAAGATGGAGGAAGTTGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400051894
PEP Infomation

pacid=37449565 transcript=PGSC0003DMT400076601 locus=PGSC0003DMG400029787 ID=PGSC0003DMT400076601.v4.03 annot-version=v4.03
Sequence

MAEAETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFQSLTDKSKLDAQ
PELFIHIIPDKTNNTLTIIDSGVGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQ
FGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVARDTSGEDLGRGTKITLFLKE
DQLEYLEERRLKDLIKKHSEFISYPISLWVEKTIEKEISDDEDEEEKKDEEGKVEEVDEE
KEKEEKKKKKIKEVSNEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHF
SVEGQLEFKAVLFIPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEELIPEYLSFVKGIV
DSEDLPLNISREMLQQNKILKVIRKNLVKKCIELFFEIAENKEDYDKFYEAFSKNLKLGI
HEDSQNRSKFAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLE
KLKKKGYEVLYMVDAIDEYSIGQLKEFEGKKLVSATKEGLKLEETEDEKKKHEELKEKFE
GLCKVIKDVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMS
SKKTMEINPENAIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGNRIH
RMLKLGLSIDEDSGDAEADMPALEDPEVDAEGSKMEEVD*

Transcript Sequence

Transcript ID

PGSC0003DMT400076601
Transcript Infomation

pacid=37449565 locus=PGSC0003DMG400029787 ID=PGSC0003DMT400076601.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGGCAGAGACGTTTGCTTTCCAAGCTGAGATCAACCAGCTTTTGAGTCTCATC
ATCAATACTTTTTACAGTAACAAAGAGATCTTTCTCAGGGAACTCATTAGTAACTCTTCT
GATGCACTGGACAAGATCCGTTTTCAGAGTTTGACTGACAAGAGCAAGCTAGATGCTCAA
CCTGAACTTTTCATTCACATCATCCCCGATAAGACCAACAATACCCTCACAATCATTGAC
AGTGGTGTTGGTATGACAAAGGCTGATCTTGTGAACAACCTTGGTACAATTGCTAGGTCT
GGCACCAAGGAATTTATGGAGGCCATTGCTGCTGGTGCTGATGTAAGCATGATTGGGCAA
TTTGGTGTTGGTTTCTACTCTGCTTACTTGGTCGCTGAAAGGGTTGTTGTGACGACAAAG
CACAATGATGATGAACAATATGTTTGGGAATCTCAAGCTGGTGGTTCATTCACTGTTGCA
AGAGATACATCTGGTGAGGACCTTGGCAGAGGTACCAAAATTACCCTCTTCCTCAAGGAG
GACCAACTTGAATACCTTGAAGAGCGAAGGCTCAAGGACCTGATTAAGAAGCATTCTGAG
TTCATCAGCTATCCAATCTCTTTGTGGGTTGAGAAGACCATAGAAAAGGAAATCTCTGAT
GATGAGGACGAAGAGGAGAAGAAAGATGAGGAAGGAAAGGTAGAGGAGGTTGATGAAGAA
AAGGAGAAGGAAGAGAAGAAAAAGAAGAAAATTAAGGAAGTCTCTAATGAGTGGTCATTG
GTGAATAAGCAGAAGCCCATATGGATGAGGAAGCCTGAGGAGATCACAAAAGAGGAGTAT
GCTGCATTCTACAAGAGCCTGACAAATGATTGGGAAGAGCATTTGGCTGTCAAGCACTTC
TCTGTTGAGGGTCAGCTGGAGTTCAAGGCTGTTCTTTTTATTCCAAAGAGAGCTCCTTTT
GACCTCTTTGACACCAAGAAGAAGCCCAACAATATCAAGCTCTATGTTCGCCGTGTGTTC
ATCATGGATAACTGTGAGGAATTGATTCCTGAATATTTGAGCTTTGTGAAGGGTATTGTG
GATTCCGAGGACCTTCCCCTCAACATCTCTAGAGAGATGTTACAGCAGAATAAGATCCTG
AAGGTTATTCGCAAAAACTTGGTAAAGAAGTGCATTGAGCTATTCTTTGAAATCGCCGAA
AACAAAGAAGACTATGACAAGTTCTATGAGGCCTTCTCAAAGAACCTCAAGCTTGGTATC
CATGAGGATTCACAGAACAGGTCTAAGTTTGCTGAACTGCTGAGATATCACTCCACCAAA
AGTGGTGATGAGATGACCAGCTTGAAGGACTATGTAACCAGGATGAAAGAAGGCCAGAAT
GATATTTACTACATTACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCACCCTTCCTTGAG
AAGCTGAAGAAGAAGGGTTATGAGGTTCTTTACATGGTTGATGCTATTGATGAGTATTCA
ATTGGTCAATTGAAGGAATTTGAGGGTAAGAAGCTTGTTTCTGCTACCAAGGAAGGCCTC
AAGCTTGAGGAGACTGAAGATGAGAAGAAAAAGCACGAAGAACTAAAGGAGAAGTTTGAG
GGTCTGTGCAAGGTGATTAAGGATGTTCTAGGTGACAAGGTTGAGAAAGTGGTGGTCTCT
GACCGTGTTGTGGATTCTCCTTGCTGCTTGGTTACTGGAGAATATGGTTGGACTGCCAAC
ATGGAGAGAATTATGAAGGCACAAGCTCTCAGGGACTCTAGCATGGCTGGATACATGTCT
AGCAAGAAGACCATGGAGATAAACCCAGAGAATGCCATCATGGATGAGCTCAGGAAGAGA
GCTGATGCTGACAAGAATGACAAGTCCGTCAAGGATTTGGTTCTATTGTTGTTTGAGACT
GCTCTTCTTACCTCAGGTTTCAGCCTTGATGAGCCAAACACATTTGGCAACAGAATTCAC
AGGATGTTGAAACTTGGTCTGAGTATTGATGAGGATAGTGGAGATGCTGAAGCTGACATG
CCAGCATTGGAGGATCCTGAAGTTGATGCTGAGGGCAGCAAGATGGAGGAAGTTGACTAA