Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076600
CDS Infomation

pacid=37446645 polypeptide=PGSC0003DMP400051893 locus=PGSC0003DMG400029786 ID=PGSC0003DMT400076600.v4.03 annot-version=v4.03
Sequence

ATGTTCAAATTACCATTAGAATTTGAGGCTTCCATGAATCAGAAACAATCAGAAGATCAG
AAGCAAACTGAGGAAACTATTATCAATAAATCTGGAGAGGATTTTATAACTTGTATTTAT
GTAGCCAAAATTGCACATTTTTTCCATGCCATAACTACAACATGGTCAAAAAACATGACT
AGCCATACCCTTTATATCATAGTGGAACACCTTTCTGAAGAAACACATTTCACATGTAAA
ATTGACCTAAAATCTTGGCAATTTTGGGGTAAGAAAGGTTTGAAATCATTCAGAGTGGGT
GAGAAGCGCATGGACATTTACTGGGATTTGAGATCAGCCAAATTCTCCACCAGACCAGAG
CCTGTATCAGATTATTATGTGGCATTGGTCTCAGAAGGGGAGATGGTATTATTATTAGGT
GATCAAAATAAAGAAGCATTCAAGAGAACAAAATCAAGACCAGCCATGCTAGATGCTTCA
TTATTACACAAGAAGGAAACTATATACGCGAAAAAATGCTTTTGCACAAGAACAATGTTG
GGCCAAGGAAAAAAACAACATGATATTACTATTGAATCTGTCCTTTCAGGTCCATCTGAT
CCTGCTATGCAGATCAGTGTGAATGGAACTGTAGCAATTCGGATCGCGAATTTGCATTGG
AGATTTAGGGGAAATGAAAAGGTTTTTTTGGATAATGTACTTGTTGAGATCTTTTGGGAT
GTGCATGATTGGTTGTATAGTGGTCCTAACTTTGGTCCAGGATCTTTCATTTTCAAGCAA
GGTAAATTGGAAGAGAGATATTCAGACTCTGGAAGCTATATCAATGATGAAAGTTGCGAT
TTGCAATCTCCATCTACAGAATTTTGTCATTTTCTTTATGCATGGAAGACTGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400051893
PEP Infomation

pacid=37446645 transcript=PGSC0003DMT400076600 locus=PGSC0003DMG400029786 ID=PGSC0003DMT400076600.v4.03 annot-version=v4.03
Sequence

MFKLPLEFEASMNQKQSEDQKQTEETIINKSGEDFITCIYVAKIAHFFHAITTTWSKNMT
SHTLYIIVEHLSEETHFTCKIDLKSWQFWGKKGLKSFRVGEKRMDIYWDLRSAKFSTRPE
PVSDYYVALVSEGEMVLLLGDQNKEAFKRTKSRPAMLDASLLHKKETIYAKKCFCTRTML
GQGKKQHDITIESVLSGPSDPAMQISVNGTVAIRIANLHWRFRGNEKVFLDNVLVEIFWD
VHDWLYSGPNFGPGSFIFKQGKLEERYSDSGSYINDESCDLQSPSTEFCHFLYAWKTE*

Transcript Sequence

Transcript ID

PGSC0003DMT400076600
Transcript Infomation

pacid=37446645 locus=PGSC0003DMG400029786 ID=PGSC0003DMT400076600.v4.03 annot-version=v4.03
Sequence

ATGTTCAAATTACCATTAGAATTTGAGGCTTCCATGAATCAGAAACAATCAGAAGATCAG
AAGCAAACTGAGGAAACTATTATCAATAAATCTGGAGAGGATTTTATAACTTGTATTTAT
GTAGCCAAAATTGCACATTTTTTCCATGCCATAACTACAACATGGTCAAAAAACATGACT
AGCCATACCCTTTATATCATAGTGGAACACCTTTCTGAAGAAACACATTTCACATGTAAA
ATTGACCTAAAATCTTGGCAATTTTGGGGTAAGAAAGGTTTGAAATCATTCAGAGTGGGT
GAGAAGCGCATGGACATTTACTGGGATTTGAGATCAGCCAAATTCTCCACCAGACCAGAG
CCTGTATCAGATTATTATGTGGCATTGGTCTCAGAAGGGGAGATGGTATTATTATTAGGT
GATCAAAATAAAGAAGCATTCAAGAGAACAAAATCAAGACCAGCCATGCTAGATGCTTCA
TTATTACACAAGAAGGAAACTATATACGCGAAAAAATGCTTTTGCACAAGAACAATGTTG
GGCCAAGGAAAAAAACAACATGATATTACTATTGAATCTGTCCTTTCAGGTCCATCTGAT
CCTGCTATGCAGATCAGTGTGAATGGAACTGTAGCAATTCGGATCGCGAATTTGCATTGG
AGATTTAGGGGAAATGAAAAGGTTTTTTTGGATAATGTACTTGTTGAGATCTTTTGGGAT
GTGCATGATTGGTTGTATAGTGGTCCTAACTTTGGTCCAGGATCTTTCATTTTCAAGCAA
GGTAAATTGGAAGAGAGATATTCAGACTCTGGAAGCTATATCAATGATGAAAGTTGCGAT
TTGCAATCTCCATCTACAGAATTTTGTCATTTTCTTTATGCATGGAAGACTGAATAA