Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076552
CDS Infomation

pacid=37438122 polypeptide=PGSC0003DMP400051859 locus=PGSC0003DMG400029764 ID=PGSC0003DMT400076552.v4.03 annot-version=v4.03
Sequence

ATGGGTCCAAGCAAGCTTAGACAAGCAATAGGGGCAGTAAAGGACCAGACGAGCATAAGT
TTGGCCAAAGTAGGCAGCAGCGCCTCCTTGTCCGATCTTGAAGTTGCCATCGTGAAGGCA
ACCCGACACGATGAGTACCCACCAGAGGAGAGACATATAAGGGAGATTCTAAGCTTGACT
TCTTATTCTCGAGCCTATGTTGGTGCATGTGTCAATTTCCTTTCCAGACGCCTTAGCAAG
ACGAAGAATTGGGTTGTGGCGCTTAAGGCACTCATGTTGATCCATAGGCTGTTATGTGAT
GGAGATCCATCCTATGAGGAAGAGATTTTCTTTGCCACAAGGCGAGGAACAAGGCTTCTT
AACATGTCTGATTTTCGTGACTCCAGATCTAACTCCTGGGATTGTTCTGCTTTTGTACGA
TCTTATGCTTTGTACCTTGACGAACATTTGGAGTTTAGGATGCAGAACCGTAGGGGAAAA
CGCAGTGCATTTGCATACAATGATGATGATGAAGAAGAGGTTCGCCATAATGCCAGGGGT
ATAAAAGCTACACCCCTCAGGGAAATGAAGAATGATCGAGTTTTCTCAAGGATTCATCAT
CTCATGCAACTTCTTGAGCGATTCTTAGCCTGTCGACCTGCAGGTTCTGCAAAGAACAAT
CGAGTGGTGATTGCGGCTCTATATGCATTAGTGAAGGAAAGTTTCCAGCTATATTATGAT
TTAACAGAAATCACGACTCTCTTGTTTGATAAGTTCATAGAACTATCAATCCCAGACTCT
GTGAAGGTTCTTGAGATTTTCTTCAGAATTAATAAGCAATATGAGGAGATTGAACAGTTC
TACGATTGGAGTAAAACAGTTGGAGTTACACGCACTACTGAATATCCAGATATTGACATC
ATTCCACCTAAGAAACTCGAGCGTATGGATGACCTTATACGAGAAAAGTCCTTCAGGGAA
CAGAGCAGGAAGGCAATGCGGAATGAACCAACTGCTGAGCACGTTCAAGAAACTAAAAGG
CAAGAACCTAAAACTGAACCGGAAGAGGACATGAATGCAATTAAGGCATTACCAGCACCA
GAGGTATTACCAGAAGAAAAGACAGAGGAAGAGGAAAAGAAGACGGTGAAAACCCAAGAA
GAAGGAGACTTGTTAAACTTGGGTGAAGATGTTCCAACTTCGGAAGAACATGGAGATCAA
CTGGCATTAGCGTTGTTTGATGGTGGTCAAGCAACGACCAATCCTGCAACAAGCATTTCA
CCATGGCAAGCGTTCAACGATTCAGGAGATTGGGAGACAGCACTCGTTCAGTCTGCGAGT
CATTTGTCAAACCAGAAGACCTCCCTCCCTGGAGGCTTCGACACATTAATGCTCAATGGC
ATGTACCAACAAGGAGCAGTGTCTCAGGCAGTAGCCTGCTCAGGTGTCGTGGCTACTGGA
AGTGCAAGCAGCGTTGCACTTGGCTCAGCAGGACGGCCAGCAATGCTAGCATTGCCTGCA
CCTCCAACCGCAAATGGTGGAGCTAATACAGCCGCACCAGGCACAGATCCTTTTGCAGCT
TCACTGGCAATAGCTCCACCAGCATATGTTCAGATGTCCGAGATGGAGAAGAAACAGAGA
CTACTAATGGAAGAGCAGTTAATGTGGCAAGAGTATCAGAAAAATGGAATGCAAGGAAAG
GTAGGATTTGCCAATGCGCAGCCAAACCCTTACCCGTATAACATTGGTGGTTACAGACAA
ACCTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400051859
PEP Infomation

pacid=37438122 transcript=PGSC0003DMT400076552 locus=PGSC0003DMG400029764 ID=PGSC0003DMT400076552.v4.03 annot-version=v4.03
Sequence

MGPSKLRQAIGAVKDQTSISLAKVGSSASLSDLEVAIVKATRHDEYPPEERHIREILSLT
SYSRAYVGACVNFLSRRLSKTKNWVVALKALMLIHRLLCDGDPSYEEEIFFATRRGTRLL
NMSDFRDSRSNSWDCSAFVRSYALYLDEHLEFRMQNRRGKRSAFAYNDDDEEEVRHNARG
IKATPLREMKNDRVFSRIHHLMQLLERFLACRPAGSAKNNRVVIAALYALVKESFQLYYD
LTEITTLLFDKFIELSIPDSVKVLEIFFRINKQYEEIEQFYDWSKTVGVTRTTEYPDIDI
IPPKKLERMDDLIREKSFREQSRKAMRNEPTAEHVQETKRQEPKTEPEEDMNAIKALPAP
EVLPEEKTEEEEKKTVKTQEEGDLLNLGEDVPTSEEHGDQLALALFDGGQATTNPATSIS
PWQAFNDSGDWETALVQSASHLSNQKTSLPGGFDTLMLNGMYQQGAVSQAVACSGVVATG
SASSVALGSAGRPAMLALPAPPTANGGANTAAPGTDPFAASLAIAPPAYVQMSEMEKKQR
LLMEEQLMWQEYQKNGMQGKVGFANAQPNPYPYNIGGYRQTF*

Transcript Sequence

Transcript ID

PGSC0003DMT400076552
Transcript Infomation

pacid=37438122 locus=PGSC0003DMG400029764 ID=PGSC0003DMT400076552.v4.03 annot-version=v4.03
Sequence

ATGGGTCCAAGCAAGCTTAGACAAGCAATAGGGGCAGTAAAGGACCAGACGAGCATAAGT
TTGGCCAAAGTAGGCAGCAGCGCCTCCTTGTCCGATCTTGAAGTTGCCATCGTGAAGGCA
ACCCGACACGATGAGTACCCACCAGAGGAGAGACATATAAGGGAGATTCTAAGCTTGACT
TCTTATTCTCGAGCCTATGTTGGTGCATGTGTCAATTTCCTTTCCAGACGCCTTAGCAAG
ACGAAGAATTGGGTTGTGGCGCTTAAGGCACTCATGTTGATCCATAGGCTGTTATGTGAT
GGAGATCCATCCTATGAGGAAGAGATTTTCTTTGCCACAAGGCGAGGAACAAGGCTTCTT
AACATGTCTGATTTTCGTGACTCCAGATCTAACTCCTGGGATTGTTCTGCTTTTGTACGA
TCTTATGCTTTGTACCTTGACGAACATTTGGAGTTTAGGATGCAGAACCGTAGGGGAAAA
CGCAGTGCATTTGCATACAATGATGATGATGAAGAAGAGGTTCGCCATAATGCCAGGGGT
ATAAAAGCTACACCCCTCAGGGAAATGAAGAATGATCGAGTTTTCTCAAGGATTCATCAT
CTCATGCAACTTCTTGAGCGATTCTTAGCCTGTCGACCTGCAGGTTCTGCAAAGAACAAT
CGAGTGGTGATTGCGGCTCTATATGCATTAGTGAAGGAAAGTTTCCAGCTATATTATGAT
TTAACAGAAATCACGACTCTCTTGTTTGATAAGTTCATAGAACTATCAATCCCAGACTCT
GTGAAGGTTCTTGAGATTTTCTTCAGAATTAATAAGCAATATGAGGAGATTGAACAGTTC
TACGATTGGAGTAAAACAGTTGGAGTTACACGCACTACTGAATATCCAGATATTGACATC
ATTCCACCTAAGAAACTCGAGCGTATGGATGACCTTATACGAGAAAAGTCCTTCAGGGAA
CAGAGCAGGAAGGCAATGCGGAATGAACCAACTGCTGAGCACGTTCAAGAAACTAAAAGG
CAAGAACCTAAAACTGAACCGGAAGAGGACATGAATGCAATTAAGGCATTACCAGCACCA
GAGGTATTACCAGAAGAAAAGACAGAGGAAGAGGAAAAGAAGACGGTGAAAACCCAAGAA
GAAGGAGACTTGTTAAACTTGGGTGAAGATGTTCCAACTTCGGAAGAACATGGAGATCAA
CTGGCATTAGCGTTGTTTGATGGTGGTCAAGCAACGACCAATCCTGCAACAAGCATTTCA
CCATGGCAAGCGTTCAACGATTCAGGAGATTGGGAGACAGCACTCGTTCAGTCTGCGAGT
CATTTGTCAAACCAGAAGACCTCCCTCCCTGGAGGCTTCGACACATTAATGCTCAATGGC
ATGTACCAACAAGGAGCAGTGTCTCAGGCAGTAGCCTGCTCAGGTGTCGTGGCTACTGGA
AGTGCAAGCAGCGTTGCACTTGGCTCAGCAGGACGGCCAGCAATGCTAGCATTGCCTGCA
CCTCCAACCGCAAATGGTGGAGCTAATACAGCCGCACCAGGCACAGATCCTTTTGCAGCT
TCACTGGCAATAGCTCCACCAGCATATGTTCAGATGTCCGAGATGGAGAAGAAACAGAGA
CTACTAATGGAAGAGCAGTTAATGTGGCAAGAGTATCAGAAAAATGGAATGCAAGGAAAG
GTAGGATTTGCCAATGCGCAGCCAAACCCTTACCCGTATAACATTGGTGGTTACAGACAA
ACCTTCTAA