Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076547
CDS Infomation

pacid=37435236 polypeptide=PGSC0003DMP400051856 locus=PGSC0003DMG400029761 ID=PGSC0003DMT400076547.v4.03 annot-version=v4.03
Sequence

ATGAGAGGCGCCGGACGACGTCGTACCAACTCTGTAGTGCCGGATCGCCGCCATCCACCT
CCGACTCCGATCAACGACCCAAGGCAATTTATCTCCACCGGCGGCCGTGATTCCGACGCA
AGCTTCGCCAGTAGCCGGCCTTCATCTGCCGGTGTAAACACACGGTCCTCCGCTATCCCC
ATCTCTGACCGCTCCTATCAACTCTCTGCTCTGCGTACAATCAATGCTTACCTTTCCTCC
CACTCTCTCCCTTTTACTCTCAAACATCCTCTCCCTTCTGCAAAAGATATCACCGAAACC
CTAAAATTCATTCTCTCTCGTTTCGGATTTTCATCAGCAGAGTCGCACAAACTCGAAGAT
AATCTCCAAACCCTACTGAAATCCCTAAATTCCCCCGTGAAATTGAACAAATCTGCATTA
CGCGCCCCTGGGACGCCTCATTCTTGGCCTAGTCTACTTGCAGCAATTCACTGGCTTGTT
CAGCTGTGTAAATTTGATGATCACCGGTTGAGTTCGGCTCAACCACTAGCTCCGGATAAC
AAGGAATTGAGCTATACTATAGAGAGTTATTTGCATTACTTTAGGGGAAAAGATGAACAA
GTAGATGAATTGGATCGTCAATTTATGCAAGAGTTGGAACAACATAAGGAGCGGTTGGTT
GAGAATGTGAATGTCTTGGAGGAGAATGTGAAGGCTCAAGAGGAGAAGTTGGAAGCAATG
AAGACAGGACCATCGGAAAGAGAGACGTTGGAGAAGGAGAAGAGTGCGTTGGAGGAAGAT
GTCAAGAAGTTTCAGGCTATCATTGAACAGTTAGAAGGGCATATAGTGAAAATGGATAAG
ATGGTGGAAGAGAAAGAAAAAGGGTTAGAGACTAAGGTTACGGAGAAAGAGAGCATTTGT
GCAGAGAATGAGGAGTTGAAGAAGAGGGTGGAGGAACAAGGGATTAATTCCAGGGATGCA
GATAGGATGAAGAGGGAGTTGCATGCTTTGGAAAGGGATATTGGGGATATTGAGAACCAG
AGGATTGAATGGGAGGAGAAGACTTGGGACCTCGACTCTGCGATCGGGAACATGTACAAG
AAGCTTGAGGAGCTAATGATCGAGTGCAACCAATCTATCAGGAGGTTAAAGCTTGGAAAT
GAATTTCAGTATCAATTGAATCCCCAAGGGTCCTCACCAGTGAAGGTATTAGGTATAAAT
TACAAAAAAACATTAAAGCCCACTCTTGCATCCTTTGAAGATGAGATGAAAAAGAGTTCC
ATGGGGAAAATGGAAGAGTTGATATCTCTCCAGCAACAGTCATCTGAGAAGGCTATGAAA
GTAGAGTCAAAGAGGAATCGTCTGGCTACTCTTCAGGCTCACATTGATGATTTGGAGGCT
CAGTTGGACTTGGTAAAGAAGGAAAGACTGGATTTCACATCTAGCTGTGCAACAGAAGCC
GGAAGGATAGTTGAGGAAGTTGAAGCAGAGACTCAGAAGTTGGATCAGGTTGAAAGAGAG
GCGGCGGACTTTCTGAAGGCGTCAAAGGCCAAATTACAGGAAACAATCGCACAAACTGAG
GAAGAAGTGCAGCTGTGTGCCCGTGAACTCTTTGCTGTTGTTGATTCAGTCTCAAAATAT
AAAGAGTATATTACATCAAAAGTTGGCATGATGAAGAATGATCTCGCAGAAGCTGCCGGG
ACTATAGCAGATATGCATAAAGCTGGTTTGCCTGTCTCTGACGCAAACCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400051856
PEP Infomation

pacid=37435236 transcript=PGSC0003DMT400076547 locus=PGSC0003DMG400029761 ID=PGSC0003DMT400076547.v4.03 annot-version=v4.03
Sequence

MRGAGRRRTNSVVPDRRHPPPTPINDPRQFISTGGRDSDASFASSRPSSAGVNTRSSAIP
ISDRSYQLSALRTINAYLSSHSLPFTLKHPLPSAKDITETLKFILSRFGFSSAESHKLED
NLQTLLKSLNSPVKLNKSALRAPGTPHSWPSLLAAIHWLVQLCKFDDHRLSSAQPLAPDN
KELSYTIESYLHYFRGKDEQVDELDRQFMQELEQHKERLVENVNVLEENVKAQEEKLEAM
KTGPSERETLEKEKSALEEDVKKFQAIIEQLEGHIVKMDKMVEEKEKGLETKVTEKESIC
AENEELKKRVEEQGINSRDADRMKRELHALERDIGDIENQRIEWEEKTWDLDSAIGNMYK
KLEELMIECNQSIRRLKLGNEFQYQLNPQGSSPVKVLGINYKKTLKPTLASFEDEMKKSS
MGKMEELISLQQQSSEKAMKVESKRNRLATLQAHIDDLEAQLDLVKKERLDFTSSCATEA
GRIVEEVEAETQKLDQVEREAADFLKASKAKLQETIAQTEEEVQLCARELFAVVDSVSKY
KEYITSKVGMMKNDLAEAAGTIADMHKAGLPVSDANH*

Transcript Sequence

Transcript ID

PGSC0003DMT400076547
Transcript Infomation

pacid=37435236 locus=PGSC0003DMG400029761 ID=PGSC0003DMT400076547.v4.03 annot-version=v4.03
Sequence

ATGAGAGGCGCCGGACGACGTCGTACCAACTCTGTAGTGCCGGATCGCCGCCATCCACCT
CCGACTCCGATCAACGACCCAAGGCAATTTATCTCCACCGGCGGCCGTGATTCCGACGCA
AGCTTCGCCAGTAGCCGGCCTTCATCTGCCGGTGTAAACACACGGTCCTCCGCTATCCCC
ATCTCTGACCGCTCCTATCAACTCTCTGCTCTGCGTACAATCAATGCTTACCTTTCCTCC
CACTCTCTCCCTTTTACTCTCAAACATCCTCTCCCTTCTGCAAAAGATATCACCGAAACC
CTAAAATTCATTCTCTCTCGTTTCGGATTTTCATCAGCAGAGTCGCACAAACTCGAAGAT
AATCTCCAAACCCTACTGAAATCCCTAAATTCCCCCGTGAAATTGAACAAATCTGCATTA
CGCGCCCCTGGGACGCCTCATTCTTGGCCTAGTCTACTTGCAGCAATTCACTGGCTTGTT
CAGCTGTGTAAATTTGATGATCACCGGTTGAGTTCGGCTCAACCACTAGCTCCGGATAAC
AAGGAATTGAGCTATACTATAGAGAGTTATTTGCATTACTTTAGGGGAAAAGATGAACAA
GTAGATGAATTGGATCGTCAATTTATGCAAGAGTTGGAACAACATAAGGAGCGGTTGGTT
GAGAATGTGAATGTCTTGGAGGAGAATGTGAAGGCTCAAGAGGAGAAGTTGGAAGCAATG
AAGACAGGACCATCGGAAAGAGAGACGTTGGAGAAGGAGAAGAGTGCGTTGGAGGAAGAT
GTCAAGAAGTTTCAGGCTATCATTGAACAGTTAGAAGGGCATATAGTGAAAATGGATAAG
ATGGTGGAAGAGAAAGAAAAAGGGTTAGAGACTAAGGTTACGGAGAAAGAGAGCATTTGT
GCAGAGAATGAGGAGTTGAAGAAGAGGGTGGAGGAACAAGGGATTAATTCCAGGGATGCA
GATAGGATGAAGAGGGAGTTGCATGCTTTGGAAAGGGATATTGGGGATATTGAGAACCAG
AGGATTGAATGGGAGGAGAAGACTTGGGACCTCGACTCTGCGATCGGGAACATGTACAAG
AAGCTTGAGGAGCTAATGATCGAGTGCAACCAATCTATCAGGAGGTTAAAGCTTGGAAAT
GAATTTCAGTATCAATTGAATCCCCAAGGGTCCTCACCAGTGAAGGTATTAGGTATAAAT
TACAAAAAAACATTAAAGCCCACTCTTGCATCCTTTGAAGATGAGATGAAAAAGAGTTCC
ATGGGGAAAATGGAAGAGTTGATATCTCTCCAGCAACAGTCATCTGAGAAGGCTATGAAA
GTAGAGTCAAAGAGGAATCGTCTGGCTACTCTTCAGGCTCACATTGATGATTTGGAGGCT
CAGTTGGACTTGGTAAAGAAGGAAAGACTGGATTTCACATCTAGCTGTGCAACAGAAGCC
GGAAGGATAGTTGAGGAAGTTGAAGCAGAGACTCAGAAGTTGGATCAGGTTGAAAGAGAG
GCGGCGGACTTTCTGAAGGCGTCAAAGGCCAAATTACAGGAAACAATCGCACAAACTGAG
GAAGAAGTGCAGCTGTGTGCCCGTGAACTCTTTGCTGTTGTTGATTCAGTCTCAAAATAT
AAAGAGTATATTACATCAAAAGTTGGCATGATGAAGAATGATCTCGCAGAAGCTGCCGGG
ACTATAGCAGATATGCATAAAGCTGGTTTGCCTGTCTCTGACGCAAACCACTGA