Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076544
CDS Infomation

pacid=37436287 polypeptide=PGSC0003DMP400051853 locus=PGSC0003DMG401029758 ID=PGSC0003DMT400076544.v4.03 annot-version=v4.03
Sequence

ATGCCCTTGTGGGTTCAACGGGCGTCCAATATCTTACTCATTGCTCGATTTCATGGTCTC
ACTTCTTCAAAATCTATCCCTTCATACGGACCTGGACCTGAGGCGGTTTGGTTTACTAAA
GTTGTATGTCTCCTCTGTTTTCACCATTCTCAATCACTTGATGTATTCGGTTCTGATTAT
TTTCGTCAAAATTTGGACCCACATATTGCTTTCACCGTTATTCACCATATTAATACCAAT
TTGAATAACCCCAGATTGGCATTTCGTTTTTTACAGTGTACTAGGATCAATCTGAATCTT
GTTCATTGTATTGGGAGTTTTAATTTGCTTTTGAGGTCACTTTCTCAGATGGGGTTTCAC
GATTCCGCTATGTTAGTGTTTAAGTTTATGAAAGCTGATGGGTATTTACTAGAAAATTCG
ATTTTGGAAAGTGTAGTATTGGCACTTGCAAATGCGGGCAAGTTTGAGATTGCCAAAGAA
ATTTTGATTTCACAAGCTGAGTTAGGTAGGGAGGAAGGTAGAATTGTTAGGCCTTTTGTA
CATAATAGTCTTTTGAGTTTGTTAATGAAACGAAGTAGGGTAGATGAAGCTGTTGATTTT
TTCAAACATCATATTTTGAGGTCAGAGAGATTGTTTCCAGATACCTGCACTTTTAACACT
GTGATTCGTGGGCTTTGTCGAGTTGGAGGAGTTGATAAGGCATTTGAGTTTTTCAATGAC
ATGGGAAGTTTTGGTTGTTTCCCTGATACTGTTACGTATAACACTCTTATAAATGGGTTG
TGTTCTGTTGGTCAAGTAAACAGGGCTCGAGGTTTGTTAGGAAATCTTGAGTTACAAGAT
GGACTGTCACCTGATGTTGTGACATATACTTCTGTTATCGCTGGTTACTGCAAGTTGGGC
AGAATGGATGAGGCTATAAATCTGATGGATGAAATGACTACTTACGGTATTAGTCCAAAT
CTGGTTACTTTTAACATTCTTATCAATGGTTTTGGCAAGATAGGAGACATGTTTTCTGCT
ATACAAATGTATGGGAGGATGTGTGCTGTTGGTTACCCTCCTGATGTTGTGACCTTCACG
TCTCTCATTGACGGTTATTGTCGTACTGGAGAATTAGATCAGGGCTTAAAGCTATGGGAT
GAAATGAACACTAGAAATTTGTCTCCAAACCTATATACTTTTTCTATTCTTATCAGTGCT
TTGAGCAAGGAAAATAGGCTAAATGAAGCTCGGGAATTATTGAGGCAATTGAAATCGAGG
GATGATATTGTCCCCCAACCATTTGTATACAACCCTGTGCTTGATGGGTTTTGCAAGGCT
GGTAATTTGAGCAAAGCAAATGTCATTGCAGCAGAAATGGAGAGCAGAGGGTGTTGCCAT
GATAAAATCACCTTCACCATTCTCATTCTTGGGCATTGCATGAAAGGAAGAATGCTTGAA
GCTATGGCCATTTTTGATAAGATGCTGTCTTTGGGTTGTGTCCCAGATGATATCACAGTA
AGTTGTTTGACATCATGCCTTCTAAAAGCTGGGATGGTAAAGGAAGCTTATAAAGTAAGG
CTCACTCCATCAAAGGACTTGAATCCTGATTTATCATCTTCAAAGCAATCTGTACCATTC
CGGACAAGTTTGGATATCCCAGTGGCTGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400051853
PEP Infomation

pacid=37436287 transcript=PGSC0003DMT400076544 locus=PGSC0003DMG401029758 ID=PGSC0003DMT400076544.v4.03 annot-version=v4.03
Sequence

MPLWVQRASNILLIARFHGLTSSKSIPSYGPGPEAVWFTKVVCLLCFHHSQSLDVFGSDY
FRQNLDPHIAFTVIHHINTNLNNPRLAFRFLQCTRINLNLVHCIGSFNLLLRSLSQMGFH
DSAMLVFKFMKADGYLLENSILESVVLALANAGKFEIAKEILISQAELGREEGRIVRPFV
HNSLLSLLMKRSRVDEAVDFFKHHILRSERLFPDTCTFNTVIRGLCRVGGVDKAFEFFND
MGSFGCFPDTVTYNTLINGLCSVGQVNRARGLLGNLELQDGLSPDVVTYTSVIAGYCKLG
RMDEAINLMDEMTTYGISPNLVTFNILINGFGKIGDMFSAIQMYGRMCAVGYPPDVVTFT
SLIDGYCRTGELDQGLKLWDEMNTRNLSPNLYTFSILISALSKENRLNEARELLRQLKSR
DDIVPQPFVYNPVLDGFCKAGNLSKANVIAAEMESRGCCHDKITFTILILGHCMKGRMLE
AMAIFDKMLSLGCVPDDITVSCLTSCLLKAGMVKEAYKVRLTPSKDLNPDLSSSKQSVPF
RTSLDIPVAV*

Transcript Sequence

Transcript ID

PGSC0003DMT400076544
Transcript Infomation

pacid=37436287 locus=PGSC0003DMG401029758 ID=PGSC0003DMT400076544.v4.03 annot-version=v4.03
Sequence

ATGCCCTTGTGGGTTCAACGGGCGTCCAATATCTTACTCATTGCTCGATTTCATGGTCTC
ACTTCTTCAAAATCTATCCCTTCATACGGACCTGGACCTGAGGCGGTTTGGTTTACTAAA
GTTGTATGTCTCCTCTGTTTTCACCATTCTCAATCACTTGATGTATTCGGTTCTGATTAT
TTTCGTCAAAATTTGGACCCACATATTGCTTTCACCGTTATTCACCATATTAATACCAAT
TTGAATAACCCCAGATTGGCATTTCGTTTTTTACAGTGTACTAGGATCAATCTGAATCTT
GTTCATTGTATTGGGAGTTTTAATTTGCTTTTGAGGTCACTTTCTCAGATGGGGTTTCAC
GATTCCGCTATGTTAGTGTTTAAGTTTATGAAAGCTGATGGGTATTTACTAGAAAATTCG
ATTTTGGAAAGTGTAGTATTGGCACTTGCAAATGCGGGCAAGTTTGAGATTGCCAAAGAA
ATTTTGATTTCACAAGCTGAGTTAGGTAGGGAGGAAGGTAGAATTGTTAGGCCTTTTGTA
CATAATAGTCTTTTGAGTTTGTTAATGAAACGAAGTAGGGTAGATGAAGCTGTTGATTTT
TTCAAACATCATATTTTGAGGTCAGAGAGATTGTTTCCAGATACCTGCACTTTTAACACT
GTGATTCGTGGGCTTTGTCGAGTTGGAGGAGTTGATAAGGCATTTGAGTTTTTCAATGAC
ATGGGAAGTTTTGGTTGTTTCCCTGATACTGTTACGTATAACACTCTTATAAATGGGTTG
TGTTCTGTTGGTCAAGTAAACAGGGCTCGAGGTTTGTTAGGAAATCTTGAGTTACAAGAT
GGACTGTCACCTGATGTTGTGACATATACTTCTGTTATCGCTGGTTACTGCAAGTTGGGC
AGAATGGATGAGGCTATAAATCTGATGGATGAAATGACTACTTACGGTATTAGTCCAAAT
CTGGTTACTTTTAACATTCTTATCAATGGTTTTGGCAAGATAGGAGACATGTTTTCTGCT
ATACAAATGTATGGGAGGATGTGTGCTGTTGGTTACCCTCCTGATGTTGTGACCTTCACG
TCTCTCATTGACGGTTATTGTCGTACTGGAGAATTAGATCAGGGCTTAAAGCTATGGGAT
GAAATGAACACTAGAAATTTGTCTCCAAACCTATATACTTTTTCTATTCTTATCAGTGCT
TTGAGCAAGGAAAATAGGCTAAATGAAGCTCGGGAATTATTGAGGCAATTGAAATCGAGG
GATGATATTGTCCCCCAACCATTTGTATACAACCCTGTGCTTGATGGGTTTTGCAAGGCT
GGTAATTTGAGCAAAGCAAATGTCATTGCAGCAGAAATGGAGAGCAGAGGGTGTTGCCAT
GATAAAATCACCTTCACCATTCTCATTCTTGGGCATTGCATGAAAGGAAGAATGCTTGAA
GCTATGGCCATTTTTGATAAGATGCTGTCTTTGGGTTGTGTCCCAGATGATATCACAGTA
AGTTGTTTGACATCATGCCTTCTAAAAGCTGGGATGGTAAAGGAAGCTTATAAAGTAAGG
CTCACTCCATCAAAGGACTTGAATCCTGATTTATCATCTTCAAAGCAATCTGTACCATTC
CGGACAAGTTTGGATATCCCAGTGGCTGTTTAA