Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076472
CDS Infomation

pacid=37439664 polypeptide=PGSC0003DMP400051809 locus=PGSC0003DMG402029739 ID=PGSC0003DMT400076472.v4.03 annot-version=v4.03
Sequence

ATGGCAGGGAGGTATGGTTCTTCCGGCGGAGTTGCATCGACGACGATGAACGTAACTAAT
ACGCCGGCGAAAGATCTTGCTTACACCAATTGTGGATATTGTTCTCCTACAGATCTCAGA
AATTTTCTTGTTCCGGGATCTAAGTTCGCTTATGCACTCATCGCCGATGCTTTTGTTCTC
ACTCTTGCATATCCTTTCAAATTTCAATTATTACTGTTCTTATTACTAATTTTTAGATTG
AAAATTTATTTCGTTTCTGTTTTTATTATTGGAGAGACTTCTCCATTGAATGCTGATGGG
CGAATTCCGATAAGCTACTGCCTTAACTGTGAAACACTGCCCACGACGCCATTCCTAATG
GTCAACTTGGTCTTAATGCGATTCAAAGACGTTATGCCAAAGTTTCCACTGGAGACGCTA
TATCTATTTGTTCCACCTGAGGACTTCAACCTTGCTTTACTTACCCTTGACTTGGAGTTT
GTGAAAAAAGGGACCAAAGAGGAGCAGGTGGATGCAGTTTCTTTAGCTAATCAAGTTCGC
AAGAGATTTGCCAAGCAGATTATGACAACTGGGCAAAAGGTGACATTAGAGTATCATGGC
AATGGTTATATAGTCACTGTGAATCAAGCTACTGTGGAGGGGCAAGAAAAATCTAATGTT
GAAAGAGGGATGGTTTCAGCTGACACATACATTATATTTGAAGCCGCAAACTCCAGTGGA
ATAAAGATTGTCAACCAGCGTGAAGCTGCTAGCAGCAGCATCTTTAGGCAGAAAGAATTC
AATCTTGAATCATTGGGTATAGGTGGTCTGGGTGCAGAGTTTTCTGATATTTTTCGAAGA
GCTTTTGCTTCCAGGGTTTTCCCTCCCCATGTGACGAGCAAGCTTGGTATCAAGCATGTT
AAGGGAATGCTTCTCCATGGACCTCCTGGTACAGGGAAGACTCTAATGGCTCGGCAGATT
GGCAAAATGCTAAATGGCAAGGAACCTAAGATTGTCAATGGACCTGAAGTGTTAAGCAAG
TTTGTCGGTGAAACTGAAAAAAATGTGAGGGATTTGTTTGCTGATGCTGAGCAAGACCAA
AAAACCAAAGGTGACCAAAGTGAACTGCATGTTATCATTTTTGATGAGATTGATGCAATC
TGTAAGTCTAGAGGATCAACTAGAGATGGAACTGGTGTGCATGATAGCATTGTTAACCAG
CTCCTAACCAAGATAGATGGGGTGGAATCTCTGAATAATGTTTTGCTCATTGGAATGACA
AATAGGAAAGATCTGCTTGACGAAGCACTTATGAGGCCAGGACGACTAGAAGTCCAAGTG
GAGATAAGCCTTCCTGATGAAAATGGTCGACTACAAATTCTCCAGATTCATACAAATAAG
ATGAAAGAGAATTCCTTTCTTTCTCCTGATGTGAACTTGCAAGAACTTGCTGCACGGACA
AAAAATTATAGTGGTGCTGAGCTTGAAGGTGTAGTCAAAAGTGCAGTATCCTATGCATTG
AACAGGCAACTAAGCATGGATGATCTTACCAAACCAGTGGATGAGGAGAGTATAAAAGTC
ACTATGGATGACTTTTTGTATGCTATTAATGAAGTAAGACCTGCATTTGGTGCTTCCACT
GATGACCTTGAACGGTGCAGACTTAATGGCATTGTGGATTGTGGTGAACGACATCAACAC
ATTTACAGAAGAACTATGCTACTGGCAGAACAAGTTAAAGTCAGCAGGGGGAGCCCCCTT
ATTACATGTCTTCTGGAAGGCCCAAGTGGAAGTGGCAAGACTGCAATGGCAGCAACAGTG
GGAATTGAAAGTGATTTTCCCTATGTCAAGATAATTTCTGCTGAAACTATGATTGGGCTC
AGTGAAAGCAGCAAATGTTCTCAGATAGTCAAGGTATTTGAGGATGCATACAAGTCACCA
CTTAGTATAGTTGTCCTTGATGGGATTGAAAGACTTCTGGAATATGTTCCAATTGGCCCT
CGATTTTCAAATTTGATTTCTCAAACGCTGATGGTGCTCCTTAAACGGCTTCCTCCTAAG
GGTAAAAAGATTCTTGTGATTGGAACTACTAGTGAATCCGGTTTCTTGGACTCAGTTGGC
CTTTGTGATGCCTTCTCAGTCACATACCATGTTCCAACACTAAAGACAGAAGATGCCAAG
AAGGTGTTGCAACAACTTGATGTCTTTGCAAGCGATGACGTTGATTCTGCTGCTGAGGCC
TTAAATGATATGCCCATCAAGAAACTATACATGGTTGTTGAAATGGCTGCTCAGGGTGAA
CATGGTGGGACAGCAGAAGCCATCTATTCTGGGAAAGAAAAGATCAATATCGCACATTTC
TATGATTGCCTTCAAGATATTGTTCGATATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400051809
PEP Infomation

pacid=37439664 transcript=PGSC0003DMT400076472 locus=PGSC0003DMG402029739 ID=PGSC0003DMT400076472.v4.03 annot-version=v4.03
Sequence

MAGRYGSSGGVASTTMNVTNTPAKDLAYTNCGYCSPTDLRNFLVPGSKFAYALIADAFVL
TLAYPFKFQLLLFLLLIFRLKIYFVSVFIIGETSPLNADGRIPISYCLNCETLPTTPFLM
VNLVLMRFKDVMPKFPLETLYLFVPPEDFNLALLTLDLEFVKKGTKEEQVDAVSLANQVR
KRFAKQIMTTGQKVTLEYHGNGYIVTVNQATVEGQEKSNVERGMVSADTYIIFEAANSSG
IKIVNQREAASSSIFRQKEFNLESLGIGGLGAEFSDIFRRAFASRVFPPHVTSKLGIKHV
KGMLLHGPPGTGKTLMARQIGKMLNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAEQDQ
KTKGDQSELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMT
NRKDLLDEALMRPGRLEVQVEISLPDENGRLQILQIHTNKMKENSFLSPDVNLQELAART
KNYSGAELEGVVKSAVSYALNRQLSMDDLTKPVDEESIKVTMDDFLYAINEVRPAFGAST
DDLERCRLNGIVDCGERHQHIYRRTMLLAEQVKVSRGSPLITCLLEGPSGSGKTAMAATV
GIESDFPYVKIISAETMIGLSESSKCSQIVKVFEDAYKSPLSIVVLDGIERLLEYVPIGP
RFSNLISQTLMVLLKRLPPKGKKILVIGTTSESGFLDSVGLCDAFSVTYHVPTLKTEDAK
KVLQQLDVFASDDVDSAAEALNDMPIKKLYMVVEMAAQGEHGGTAEAIYSGKEKINIAHF
YDCLQDIVRY*

Transcript Sequence

Transcript ID

PGSC0003DMT400076472
Transcript Infomation

pacid=37439664 locus=PGSC0003DMG402029739 ID=PGSC0003DMT400076472.v4.03 annot-version=v4.03
Sequence

ATGGCAGGGAGGTATGGTTCTTCCGGCGGAGTTGCATCGACGACGATGAACGTAACTAAT
ACGCCGGCGAAAGATCTTGCTTACACCAATTGTGGATATTGTTCTCCTACAGATCTCAGA
AATTTTCTTGTTCCGGGATCTAAGTTCGCTTATGCACTCATCGCCGATGCTTTTGTTCTC
ACTCTTGCATATCCTTTCAAATTTCAATTATTACTGTTCTTATTACTAATTTTTAGATTG
AAAATTTATTTCGTTTCTGTTTTTATTATTGGAGAGACTTCTCCATTGAATGCTGATGGG
CGAATTCCGATAAGCTACTGCCTTAACTGTGAAACACTGCCCACGACGCCATTCCTAATG
GTCAACTTGGTCTTAATGCGATTCAAAGACGTTATGCCAAAGTTTCCACTGGAGACGCTA
TATCTATTTGTTCCACCTGAGGACTTCAACCTTGCTTTACTTACCCTTGACTTGGAGTTT
GTGAAAAAAGGGACCAAAGAGGAGCAGGTGGATGCAGTTTCTTTAGCTAATCAAGTTCGC
AAGAGATTTGCCAAGCAGATTATGACAACTGGGCAAAAGGTGACATTAGAGTATCATGGC
AATGGTTATATAGTCACTGTGAATCAAGCTACTGTGGAGGGGCAAGAAAAATCTAATGTT
GAAAGAGGGATGGTTTCAGCTGACACATACATTATATTTGAAGCCGCAAACTCCAGTGGA
ATAAAGATTGTCAACCAGCGTGAAGCTGCTAGCAGCAGCATCTTTAGGCAGAAAGAATTC
AATCTTGAATCATTGGGTATAGGTGGTCTGGGTGCAGAGTTTTCTGATATTTTTCGAAGA
GCTTTTGCTTCCAGGGTTTTCCCTCCCCATGTGACGAGCAAGCTTGGTATCAAGCATGTT
AAGGGAATGCTTCTCCATGGACCTCCTGGTACAGGGAAGACTCTAATGGCTCGGCAGATT
GGCAAAATGCTAAATGGCAAGGAACCTAAGATTGTCAATGGACCTGAAGTGTTAAGCAAG
TTTGTCGGTGAAACTGAAAAAAATGTGAGGGATTTGTTTGCTGATGCTGAGCAAGACCAA
AAAACCAAAGGTGACCAAAGTGAACTGCATGTTATCATTTTTGATGAGATTGATGCAATC
TGTAAGTCTAGAGGATCAACTAGAGATGGAACTGGTGTGCATGATAGCATTGTTAACCAG
CTCCTAACCAAGATAGATGGGGTGGAATCTCTGAATAATGTTTTGCTCATTGGAATGACA
AATAGGAAAGATCTGCTTGACGAAGCACTTATGAGGCCAGGACGACTAGAAGTCCAAGTG
GAGATAAGCCTTCCTGATGAAAATGGTCGACTACAAATTCTCCAGATTCATACAAATAAG
ATGAAAGAGAATTCCTTTCTTTCTCCTGATGTGAACTTGCAAGAACTTGCTGCACGGACA
AAAAATTATAGTGGTGCTGAGCTTGAAGGTGTAGTCAAAAGTGCAGTATCCTATGCATTG
AACAGGCAACTAAGCATGGATGATCTTACCAAACCAGTGGATGAGGAGAGTATAAAAGTC
ACTATGGATGACTTTTTGTATGCTATTAATGAAGTAAGACCTGCATTTGGTGCTTCCACT
GATGACCTTGAACGGTGCAGACTTAATGGCATTGTGGATTGTGGTGAACGACATCAACAC
ATTTACAGAAGAACTATGCTACTGGCAGAACAAGTTAAAGTCAGCAGGGGGAGCCCCCTT
ATTACATGTCTTCTGGAAGGCCCAAGTGGAAGTGGCAAGACTGCAATGGCAGCAACAGTG
GGAATTGAAAGTGATTTTCCCTATGTCAAGATAATTTCTGCTGAAACTATGATTGGGCTC
AGTGAAAGCAGCAAATGTTCTCAGATAGTCAAGGTATTTGAGGATGCATACAAGTCACCA
CTTAGTATAGTTGTCCTTGATGGGATTGAAAGACTTCTGGAATATGTTCCAATTGGCCCT
CGATTTTCAAATTTGATTTCTCAAACGCTGATGGTGCTCCTTAAACGGCTTCCTCCTAAG
GGTAAAAAGATTCTTGTGATTGGAACTACTAGTGAATCCGGTTTCTTGGACTCAGTTGGC
CTTTGTGATGCCTTCTCAGTCACATACCATGTTCCAACACTAAAGACAGAAGATGCCAAG
AAGGTGTTGCAACAACTTGATGTCTTTGCAAGCGATGACGTTGATTCTGCTGCTGAGGCC
TTAAATGATATGCCCATCAAGAAACTATACATGGTTGTTGAAATGGCTGCTCAGGGTGAA
CATGGTGGGACAGCAGAAGCCATCTATTCTGGGAAAGAAAAGATCAATATCGCACATTTC
TATGATTGCCTTCAAGATATTGTTCGATATTGA