Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076454
CDS Infomation

pacid=37425454 polypeptide=PGSC0003DMP400051798 locus=PGSC0003DMG400029731 ID=PGSC0003DMT400076454.v4.03 annot-version=v4.03
Sequence

ATGGGTCTTCCTGAAGTCGTTGATGTTGCCCGCAATTATGCCGTCATGGTCAGAATTCAA
GGCCCGGACCCAAAAGGCCTGAAGATGCGAAAACATGCTTTTCACCTTTACAATTCTGGG
AAGACGACACTATCAGCATCTGGGATGCTTTTGCCCAGTTCCTTTGTTAATGGTTCGGTG
TCTGAGCAGATTCAGGGTGAAAGCAAGTTGCAGTCTATTGGAGGTCACGTCTTGGTTTTA
ACTGTGGCTTCTGTTATTGAGCCATTTGTCGTACAACAGGGTAGAAGTGACATATCAAAG
GATAAGCCCAAGCTGATTCCTGGTGCTCAAATTGATATACTGCGGGAGGGAGAAATAAAA
CTGCAGAATGATCTCAAAGAGTCTAGCAAGGAGGGTTTGAACTGGCTACCTGCTGAACTC
CTAAGAGTGGTTGACATCCCCGTGTCATCTGCTGCTGTCCAGTTCCTAATTGAAGGTTCT
TCTAGTTCAATTGAACATGGATGGGAGGTTGGTTGGTCCCTAGCTGCCTATGGAAATGCT
CATCAATCATTTACTAACACTAAGCGCAGACAGGTTGAGCAAATTTCCTTCCCAAGTCAA
ACTCCAATGGTGGAGGTGCAGTCCAGCCTTCCAAGTGTGATAGGAACATCAACTACAAGA
ATTGCTCTTCTCAGAGTTCCTTCAAATCCATATGAGGACCCGCCTCCATTAAAAGTCTCT
CCCTGGTGTAGGAGAGGTGATCTTCTTCTGGCTATGGGTTCTCCTTTTGGCATCCTGTCT
CCCAGCCACTTTTCCAATAGCATATCGGTTGGATCCATCGCAAACAGCTACCCGCCTAGT
CCTCTGAATAAAGCACTGCTGATTGCTGACATCCGTTGTCTCCCTGGAATGGAAGGTAGC
CCAGTGTTAGGGGAACATGCAGAGCTGATTGGTGTTCTGTCTCGACCACTTAGACAAAAG
GCTACTGCTGCTGAAATTCAGATGGTGATTCCGTGGGAAGCTATTACATCTGCTTGTGGT
AGCCTGCTTCAAGAAGAGCAACAAGCTGGTAGAAAGATCCATTTTAATAATGGAAACTTA
ATCAGTGTTGAAAAGAAATCACACTCCAATAATATTCGGGATGGACCCACCAATGATTCT
CAAGAGCATCTCCTAACAGGTCCTGTTCCCCCATCCTTGATTGAGAAGGCAATGACATCT
ATCTGTCTTATCACTGTTGATGACGGAGCATGGGCTTCTGGAGTTTTGCTCAACAAGAAG
GGTCTGCTTCTTACAAACGCTCATCTTCTAGAGCCGTGGAGATTTGGGAAAACATCTGCA
AATGGTTCTGGATATAACACTAAATCTGATGTAGTTTTCACCACGTCTAATCAATCTGAG
CATCCAGGGAATGAGAAATTTACCGTTCACCGAAGGAATAAATATTTGCTTCAAAAGGAA
CTAAAAACTCCACAGTTCCTTGTTAACAATGAGCAAGGTAGCTTTAGAGTTAACTTGGCA
AACACCAACAGTAGGACCATTCGTGTTCGCTTGGATTTTATGGATCCTTGGGTATGGACA
AATGCAGAGGTAGTTCATGTATCCAGAGGACCTCTGGATGTTGCACTACTACAACTTCAG
CTAGTTCCAGATGAGCTCTGTCCCATTACTGTGGACTTCATGCGCCCGTTACCTGGATCA
AAAGCATACATTCTTGGACATGGGCTATTTGGACCACGATGTGACTTCCTTCCATCTGCC
TGTGTGGGTGCAATTGCTAAAGTAGTTGAAGCGAAGATGCCTCAGCTTGATCAATCATGT
TTAGGAGGACATTTTCCGGCAATGCTTGAAACAACAGCAGCTGTACACCCTGGTGGTAGC
GGTGGGGCTGTTGTTAATTCAGAAGGACACGTGATTGCCCTTGTAACAAGTAATGCTAGA
CATGGTGGAGGGACAGTCATTCCACATTTGAACTTCAGCATTCCATGTGCAGCTTTAAAG
CCCATCTTCAAGTTTGCTGAAGACATGCAGGATCTGTCACCCTTAGAATATCTTGACAAA
CCAGATGAACAGCTTTCTTCTGTGTGGGCATTAACTCCACCTTTATCTTCTAAGCAAAGC
CCCTCTCTTCTTCATCTACCAATGCTTCCTCGAGGAGATAGTAACAATGATGCAAAGGGC
TCTAAGTTTGCTAAGTTTATAGCTGACCAGGAGGCCATGCTAAAGAGTGCAACTCAACTT
GGCAAGGTTGAAGGTCTTTCAAATAAACTTGTGCAAAGTAAGCTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400051798
PEP Infomation

pacid=37425454 transcript=PGSC0003DMT400076454 locus=PGSC0003DMG400029731 ID=PGSC0003DMT400076454.v4.03 annot-version=v4.03
Sequence

MGLPEVVDVARNYAVMVRIQGPDPKGLKMRKHAFHLYNSGKTTLSASGMLLPSSFVNGSV
SEQIQGESKLQSIGGHVLVLTVASVIEPFVVQQGRSDISKDKPKLIPGAQIDILREGEIK
LQNDLKESSKEGLNWLPAELLRVVDIPVSSAAVQFLIEGSSSSIEHGWEVGWSLAAYGNA
HQSFTNTKRRQVEQISFPSQTPMVEVQSSLPSVIGTSTTRIALLRVPSNPYEDPPPLKVS
PWCRRGDLLLAMGSPFGILSPSHFSNSISVGSIANSYPPSPLNKALLIADIRCLPGMEGS
PVLGEHAELIGVLSRPLRQKATAAEIQMVIPWEAITSACGSLLQEEQQAGRKIHFNNGNL
ISVEKKSHSNNIRDGPTNDSQEHLLTGPVPPSLIEKAMTSICLITVDDGAWASGVLLNKK
GLLLTNAHLLEPWRFGKTSANGSGYNTKSDVVFTTSNQSEHPGNEKFTVHRRNKYLLQKE
LKTPQFLVNNEQGSFRVNLANTNSRTIRVRLDFMDPWVWTNAEVVHVSRGPLDVALLQLQ
LVPDELCPITVDFMRPLPGSKAYILGHGLFGPRCDFLPSACVGAIAKVVEAKMPQLDQSC
LGGHFPAMLETTAAVHPGGSGGAVVNSEGHVIALVTSNARHGGGTVIPHLNFSIPCAALK
PIFKFAEDMQDLSPLEYLDKPDEQLSSVWALTPPLSSKQSPSLLHLPMLPRGDSNNDAKG
SKFAKFIADQEAMLKSATQLGKVEGLSNKLVQSKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400076454
Transcript Infomation

pacid=37425454 locus=PGSC0003DMG400029731 ID=PGSC0003DMT400076454.v4.03 annot-version=v4.03
Sequence

ATGGGTCTTCCTGAAGTCGTTGATGTTGCCCGCAATTATGCCGTCATGGTCAGAATTCAA
GGCCCGGACCCAAAAGGCCTGAAGATGCGAAAACATGCTTTTCACCTTTACAATTCTGGG
AAGACGACACTATCAGCATCTGGGATGCTTTTGCCCAGTTCCTTTGTTAATGGTTCGGTG
TCTGAGCAGATTCAGGGTGAAAGCAAGTTGCAGTCTATTGGAGGTCACGTCTTGGTTTTA
ACTGTGGCTTCTGTTATTGAGCCATTTGTCGTACAACAGGGTAGAAGTGACATATCAAAG
GATAAGCCCAAGCTGATTCCTGGTGCTCAAATTGATATACTGCGGGAGGGAGAAATAAAA
CTGCAGAATGATCTCAAAGAGTCTAGCAAGGAGGGTTTGAACTGGCTACCTGCTGAACTC
CTAAGAGTGGTTGACATCCCCGTGTCATCTGCTGCTGTCCAGTTCCTAATTGAAGGTTCT
TCTAGTTCAATTGAACATGGATGGGAGGTTGGTTGGTCCCTAGCTGCCTATGGAAATGCT
CATCAATCATTTACTAACACTAAGCGCAGACAGGTTGAGCAAATTTCCTTCCCAAGTCAA
ACTCCAATGGTGGAGGTGCAGTCCAGCCTTCCAAGTGTGATAGGAACATCAACTACAAGA
ATTGCTCTTCTCAGAGTTCCTTCAAATCCATATGAGGACCCGCCTCCATTAAAAGTCTCT
CCCTGGTGTAGGAGAGGTGATCTTCTTCTGGCTATGGGTTCTCCTTTTGGCATCCTGTCT
CCCAGCCACTTTTCCAATAGCATATCGGTTGGATCCATCGCAAACAGCTACCCGCCTAGT
CCTCTGAATAAAGCACTGCTGATTGCTGACATCCGTTGTCTCCCTGGAATGGAAGGTAGC
CCAGTGTTAGGGGAACATGCAGAGCTGATTGGTGTTCTGTCTCGACCACTTAGACAAAAG
GCTACTGCTGCTGAAATTCAGATGGTGATTCCGTGGGAAGCTATTACATCTGCTTGTGGT
AGCCTGCTTCAAGAAGAGCAACAAGCTGGTAGAAAGATCCATTTTAATAATGGAAACTTA
ATCAGTGTTGAAAAGAAATCACACTCCAATAATATTCGGGATGGACCCACCAATGATTCT
CAAGAGCATCTCCTAACAGGTCCTGTTCCCCCATCCTTGATTGAGAAGGCAATGACATCT
ATCTGTCTTATCACTGTTGATGACGGAGCATGGGCTTCTGGAGTTTTGCTCAACAAGAAG
GGTCTGCTTCTTACAAACGCTCATCTTCTAGAGCCGTGGAGATTTGGGAAAACATCTGCA
AATGGTTCTGGATATAACACTAAATCTGATGTAGTTTTCACCACGTCTAATCAATCTGAG
CATCCAGGGAATGAGAAATTTACCGTTCACCGAAGGAATAAATATTTGCTTCAAAAGGAA
CTAAAAACTCCACAGTTCCTTGTTAACAATGAGCAAGGTAGCTTTAGAGTTAACTTGGCA
AACACCAACAGTAGGACCATTCGTGTTCGCTTGGATTTTATGGATCCTTGGGTATGGACA
AATGCAGAGGTAGTTCATGTATCCAGAGGACCTCTGGATGTTGCACTACTACAACTTCAG
CTAGTTCCAGATGAGCTCTGTCCCATTACTGTGGACTTCATGCGCCCGTTACCTGGATCA
AAAGCATACATTCTTGGACATGGGCTATTTGGACCACGATGTGACTTCCTTCCATCTGCC
TGTGTGGGTGCAATTGCTAAAGTAGTTGAAGCGAAGATGCCTCAGCTTGATCAATCATGT
TTAGGAGGACATTTTCCGGCAATGCTTGAAACAACAGCAGCTGTACACCCTGGTGGTAGC
GGTGGGGCTGTTGTTAATTCAGAAGGACACGTGATTGCCCTTGTAACAAGTAATGCTAGA
CATGGTGGAGGGACAGTCATTCCACATTTGAACTTCAGCATTCCATGTGCAGCTTTAAAG
CCCATCTTCAAGTTTGCTGAAGACATGCAGGATCTGTCACCCTTAGAATATCTTGACAAA
CCAGATGAACAGCTTTCTTCTGTGTGGGCATTAACTCCACCTTTATCTTCTAAGCAAAGC
CCCTCTCTTCTTCATCTACCAATGCTTCCTCGAGGAGATAGTAACAATGATGCAAAGGGC
TCTAAGTTTGCTAAGTTTATAGCTGACCAGGAGGCCATGCTAAAGAGTGCAACTCAACTT
GGCAAGGTTGAAGGTCTTTCAAATAAACTTGTGCAAAGTAAGCTATGA