Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076439
CDS Infomation

pacid=37428841 polypeptide=PGSC0003DMP400051783 locus=PGSC0003DMG400029726 ID=PGSC0003DMT400076439.v4.03 annot-version=v4.03
Sequence

ATGTCCATGAATAGTGGGGTGTTTCCTCCAGATACTGGACAGATTAGGCATATCGATTCG
ATAGAGAAAAATGATGTTGGAAAAATTGCATCAATTGAATCTCCTCCACCTCCACCTCTT
GCACATTTTAAAGGATATACTCTTCCTCCTGGGAATCCATGTGAAGGCTTCACGCTGCCA
CCGCCCCCAGCAGATAAGAAGAGAACTGGACCAAGACCATGTCCAGTATGCTATCTTCCT
GTCGAACAAGCTATTGCATTAATGCCAGATGCACCTTCCTTTTCTCCCGGAGTTAGCAGT
TTAACTTACATCCATGAGGAAAATTTGAGTAAATCTGAGTTTGGAGGTTCAGAATTTGGT
GGATATCCTTCACTGATGCAGAGGAATGATTCATATGACGTAAGAGAGTCCATGAGTGTG
CATTGCGGATTTGTCAGGGGAGCCAGGCCAGGGCATCAGACAGGTTTTGACATTGATGAT
TCTAACCTTCTTGCGATGGAATCTTGTCGAGGTGTTGTTGTGGCATCGGCAATATTTGGT
GCTTTTGATTTGATTCGGCAACCACAAAATATAAGTGAATATGCTAAAGGGAATGTCTGC
TTCTACATGTTTGTGGATGAAGAAACAGAAAACTTCCTGAGAAATTCAAGTGAACTGGAT
AGTAGCATGAGAATTGGTTTATGGAGAATCGCTGTTGTTCATAATCTGCCTTATGATGAT
CCACGACGAAATGGAAAGGTCCCAAAGCTTTTGCTGCACAGGCTTTTCCCGAATGCCCGT
TATTCTCTATGGGTTGATGCAAAACTTGAGCTTGTTGTGGATCCATATCAAATACTTGAA
AGATTCTTGTGGAGAAAAAATGCAAGCTTTGCAATATCAAGACACTACAGGCGCTTTGAT
GTGTTTGTAGAAGCAGAGGCTAATAAGGCTGCTTCTAAGTTTGACAATGCTTCCATCGAT
TTCCAGGTTGACTTCTATAGAAAGGAAGGTCTAACTCCATATACCAGAGCTAAACTTCCT
ATCTCAAGTGATGTTCCTGAGGGGTGTGTAATTATAAAAGAGCATATTCCGATCTCCAAT
CTCTTTACTTGTCTTTGGTTTAATGAAGTGGACCGCTTTACTCCAAGAGACCAAATTAGC
TTTGCCATTGTGAGAGACAAGATCAGGGAAAAGACAAATTGGACTTTGAATATGTTCTTA
GACTGTGAACGGCGAAACTTTGTGATTCAGGGTTATCATAGAGACGTTCTTGAGCGCTGG
CCTCCCCCACCTCTACCTGGTGCTATTGCGGTTGTTCATCCTCCACCACCTGTAATTGAT
GAAACTCTGCCCAATATTTCAGCATCAAGTTTTGTTACTAGTCCAATCAAAAAGATACCC
ACGAAGCGTGGGAGAGAAAGGAAATCCAGACGTCATAGAAAAGTTATTCCGGGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400051783
PEP Infomation

pacid=37428841 transcript=PGSC0003DMT400076439 locus=PGSC0003DMG400029726 ID=PGSC0003DMT400076439.v4.03 annot-version=v4.03
Sequence

MSMNSGVFPPDTGQIRHIDSIEKNDVGKIASIESPPPPPLAHFKGYTLPPGNPCEGFTLP
PPPADKKRTGPRPCPVCYLPVEQAIALMPDAPSFSPGVSSLTYIHEENLSKSEFGGSEFG
GYPSLMQRNDSYDVRESMSVHCGFVRGARPGHQTGFDIDDSNLLAMESCRGVVVASAIFG
AFDLIRQPQNISEYAKGNVCFYMFVDEETENFLRNSSELDSSMRIGLWRIAVVHNLPYDD
PRRNGKVPKLLLHRLFPNARYSLWVDAKLELVVDPYQILERFLWRKNASFAISRHYRRFD
VFVEAEANKAASKFDNASIDFQVDFYRKEGLTPYTRAKLPISSDVPEGCVIIKEHIPISN
LFTCLWFNEVDRFTPRDQISFAIVRDKIREKTNWTLNMFLDCERRNFVIQGYHRDVLERW
PPPPLPGAIAVVHPPPPVIDETLPNISASSFVTSPIKKIPTKRGRERKSRRHRKVIPG*

Transcript Sequence

Transcript ID

PGSC0003DMT400076439
Transcript Infomation

pacid=37428841 locus=PGSC0003DMG400029726 ID=PGSC0003DMT400076439.v4.03 annot-version=v4.03
Sequence

ATGTCCATGAATAGTGGGGTGTTTCCTCCAGATACTGGACAGATTAGGCATATCGATTCG
ATAGAGAAAAATGATGTTGGAAAAATTGCATCAATTGAATCTCCTCCACCTCCACCTCTT
GCACATTTTAAAGGATATACTCTTCCTCCTGGGAATCCATGTGAAGGCTTCACGCTGCCA
CCGCCCCCAGCAGATAAGAAGAGAACTGGACCAAGACCATGTCCAGTATGCTATCTTCCT
GTCGAACAAGCTATTGCATTAATGCCAGATGCACCTTCCTTTTCTCCCGGAGTTAGCAGT
TTAACTTACATCCATGAGGAAAATTTGAGTAAATCTGAGTTTGGAGGTTCAGAATTTGGT
GGATATCCTTCACTGATGCAGAGGAATGATTCATATGACGTAAGAGAGTCCATGAGTGTG
CATTGCGGATTTGTCAGGGGAGCCAGGCCAGGGCATCAGACAGGTTTTGACATTGATGAT
TCTAACCTTCTTGCGATGGAATCTTGTCGAGGTGTTGTTGTGGCATCGGCAATATTTGGT
GCTTTTGATTTGATTCGGCAACCACAAAATATAAGTGAATATGCTAAAGGGAATGTCTGC
TTCTACATGTTTGTGGATGAAGAAACAGAAAACTTCCTGAGAAATTCAAGTGAACTGGAT
AGTAGCATGAGAATTGGTTTATGGAGAATCGCTGTTGTTCATAATCTGCCTTATGATGAT
CCACGACGAAATGGAAAGGTCCCAAAGCTTTTGCTGCACAGGCTTTTCCCGAATGCCCGT
TATTCTCTATGGGTTGATGCAAAACTTGAGCTTGTTGTGGATCCATATCAAATACTTGAA
AGATTCTTGTGGAGAAAAAATGCAAGCTTTGCAATATCAAGACACTACAGGCGCTTTGAT
GTGTTTGTAGAAGCAGAGGCTAATAAGGCTGCTTCTAAGTTTGACAATGCTTCCATCGAT
TTCCAGGTTGACTTCTATAGAAAGGAAGGTCTAACTCCATATACCAGAGCTAAACTTCCT
ATCTCAAGTGATGTTCCTGAGGGGTGTGTAATTATAAAAGAGCATATTCCGATCTCCAAT
CTCTTTACTTGTCTTTGGTTTAATGAAGTGGACCGCTTTACTCCAAGAGACCAAATTAGC
TTTGCCATTGTGAGAGACAAGATCAGGGAAAAGACAAATTGGACTTTGAATATGTTCTTA
GACTGTGAACGGCGAAACTTTGTGATTCAGGGTTATCATAGAGACGTTCTTGAGCGCTGG
CCTCCCCCACCTCTACCTGGTGCTATTGCGGTTGTTCATCCTCCACCACCTGTAATTGAT
GAAACTCTGCCCAATATTTCAGCATCAAGTTTTGTTACTAGTCCAATCAAAAAGATACCC
ACGAAGCGTGGGAGAGAAAGGAAATCCAGACGTCATAGAAAAGTTATTCCGGGTTAG