Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076417
CDS Infomation

pacid=37424351 polypeptide=PGSC0003DMP400051766 locus=PGSC0003DMG400029717 ID=PGSC0003DMT400076417.v4.03 annot-version=v4.03
Sequence

ATGCAAGTGAATCGCCGGATTTTCCAAGCCCTAACCGGAATTACAAATCGATTTTACCAT
TCTGACAAGCCGAAGAAAGTGTCACTCTACTCTAAAATAAGTCCACTGGGAAATCCTACC
TGTACCGTAACCAATGAGCTGGATGAATGGGTTTGCAAGGGCAATAAAATCCGATTCGCG
GAGATGCAACGCATAATTCTTGATCTTCGCAAACGCAAACGCTTCAGTCAGGCCCTGGAG
GCTTCCGAGTGGTTGAAGAGTTCTGGTATTTTCACTTTTTCATCAACTGAGCATGCAGTA
CAACTGGATCTGATTGGTAAGGTTCATGGGTTTCCTGATGCAGAAAGCTACTTCAATAAC
TTGAGCAAAGAAGATAAGAATGATAAGACATATGGTGCTCTTCTACATTGTTATGTTCGC
CAGTGCCAAATGGAAAAGGCATTGACACATCTGCGGAAGATGGAGGAGGAGGGTGTTTCT
CTATCTTCTGTGGCCTTCAACGATATAATGTCACTGTACACGAGAACTGGTGAGTATGAA
AGGATCCCTGAAATGCTACGCCATATGAAGGAAATTGGGGTCTGTCCTGACAATTTAAGT
TATAGAATCTGTATCAATTCATATGGAGCAAGATCAGATATTGAGGGGATGGAGAGGGTC
TTAAATGAAATGGAGAACCAATCCTTCATTGTCATGGACTGGAACACCTATGCTGCTGTG
GCAAATACATATGTTAAAGAAGGCCTAAATGATAAAGCAAACAGTTTCCTCAAGAAAGCG
GAGGAGAAGATAGATAATAAAGAAGGGATCGGTTATAATTACCTCATCTCTGTACATTCT
AAACTAGGAAACAAAGATGAAGTCATAAGATTATGGTTTCTTGAGAAGAGTGCTCTAAAG
AGGTGCATAAATCGGGATTATATAAATATGTTAGAAGCTCTAGTGAGACTTGATTCGCTT
GAAGAAGCGGAGCAGTTGCTCAAGGAGTGGGAGACATCTGATAACTGTTATGATATCAGA
GTACCATACATAGTCATTATAGGGTATACGGATAAACAGCTATATGAAAAGGCAGAGACC
ATGCTTGAAGATTTATCTACAAAAGGGAAGATACTAACACCAAATGTTTGGGGAAGACTG
GCAGCAGGGTACCTAGATAAAGATAAGTTTGAGAGGGGTGTGAAATGCATGAAAGTTGCT
CTTTCCTTGAAGAAGGATAGAAAAGGATGGAAGCCTGACCCTAAGGTCATCATGAGAATA
CTCAGTTTGTTTGCGGAGAATGGCAATGTGAATGACGCTGAATCATTTTTTCATTCACTG
AGGCCCATTGTCGCTGTAAACAGAGAGATGTATCATGCCTTACTAAAATCATATATAGCA
GATGGTAAAGAAGTTGAAAGCCTTTTAAACAGTATGAGAGATGATAACATTGATGAAAAT
GAAGAAACAAAAGTGATACTTGGAATAAACCAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400051766
PEP Infomation

pacid=37424351 transcript=PGSC0003DMT400076417 locus=PGSC0003DMG400029717 ID=PGSC0003DMT400076417.v4.03 annot-version=v4.03
Sequence

MQVNRRIFQALTGITNRFYHSDKPKKVSLYSKISPLGNPTCTVTNELDEWVCKGNKIRFA
EMQRIILDLRKRKRFSQALEASEWLKSSGIFTFSSTEHAVQLDLIGKVHGFPDAESYFNN
LSKEDKNDKTYGALLHCYVRQCQMEKALTHLRKMEEEGVSLSSVAFNDIMSLYTRTGEYE
RIPEMLRHMKEIGVCPDNLSYRICINSYGARSDIEGMERVLNEMENQSFIVMDWNTYAAV
ANTYVKEGLNDKANSFLKKAEEKIDNKEGIGYNYLISVHSKLGNKDEVIRLWFLEKSALK
RCINRDYINMLEALVRLDSLEEAEQLLKEWETSDNCYDIRVPYIVIIGYTDKQLYEKAET
MLEDLSTKGKILTPNVWGRLAAGYLDKDKFERGVKCMKVALSLKKDRKGWKPDPKVIMRI
LSLFAENGNVNDAESFFHSLRPIVAVNREMYHALLKSYIADGKEVESLLNSMRDDNIDEN
EETKVILGINQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400076417
Transcript Infomation

pacid=37424351 locus=PGSC0003DMG400029717 ID=PGSC0003DMT400076417.v4.03 annot-version=v4.03
Sequence

ATGCAAGTGAATCGCCGGATTTTCCAAGCCCTAACCGGAATTACAAATCGATTTTACCAT
TCTGACAAGCCGAAGAAAGTGTCACTCTACTCTAAAATAAGTCCACTGGGAAATCCTACC
TGTACCGTAACCAATGAGCTGGATGAATGGGTTTGCAAGGGCAATAAAATCCGATTCGCG
GAGATGCAACGCATAATTCTTGATCTTCGCAAACGCAAACGCTTCAGTCAGGCCCTGGAG
GCTTCCGAGTGGTTGAAGAGTTCTGGTATTTTCACTTTTTCATCAACTGAGCATGCAGTA
CAACTGGATCTGATTGGTAAGGTTCATGGGTTTCCTGATGCAGAAAGCTACTTCAATAAC
TTGAGCAAAGAAGATAAGAATGATAAGACATATGGTGCTCTTCTACATTGTTATGTTCGC
CAGTGCCAAATGGAAAAGGCATTGACACATCTGCGGAAGATGGAGGAGGAGGGTGTTTCT
CTATCTTCTGTGGCCTTCAACGATATAATGTCACTGTACACGAGAACTGGTGAGTATGAA
AGGATCCCTGAAATGCTACGCCATATGAAGGAAATTGGGGTCTGTCCTGACAATTTAAGT
TATAGAATCTGTATCAATTCATATGGAGCAAGATCAGATATTGAGGGGATGGAGAGGGTC
TTAAATGAAATGGAGAACCAATCCTTCATTGTCATGGACTGGAACACCTATGCTGCTGTG
GCAAATACATATGTTAAAGAAGGCCTAAATGATAAAGCAAACAGTTTCCTCAAGAAAGCG
GAGGAGAAGATAGATAATAAAGAAGGGATCGGTTATAATTACCTCATCTCTGTACATTCT
AAACTAGGAAACAAAGATGAAGTCATAAGATTATGGTTTCTTGAGAAGAGTGCTCTAAAG
AGGTGCATAAATCGGGATTATATAAATATGTTAGAAGCTCTAGTGAGACTTGATTCGCTT
GAAGAAGCGGAGCAGTTGCTCAAGGAGTGGGAGACATCTGATAACTGTTATGATATCAGA
GTACCATACATAGTCATTATAGGGTATACGGATAAACAGCTATATGAAAAGGCAGAGACC
ATGCTTGAAGATTTATCTACAAAAGGGAAGATACTAACACCAAATGTTTGGGGAAGACTG
GCAGCAGGGTACCTAGATAAAGATAAGTTTGAGAGGGGTGTGAAATGCATGAAAGTTGCT
CTTTCCTTGAAGAAGGATAGAAAAGGATGGAAGCCTGACCCTAAGGTCATCATGAGAATA
CTCAGTTTGTTTGCGGAGAATGGCAATGTGAATGACGCTGAATCATTTTTTCATTCACTG
AGGCCCATTGTCGCTGTAAACAGAGAGATGTATCATGCCTTACTAAAATCATATATAGCA
GATGGTAAAGAAGTTGAAAGCCTTTTAAACAGTATGAGAGATGATAACATTGATGAAAAT
GAAGAAACAAAAGTGATACTTGGAATAAACCAATGA