Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076407
CDS Infomation

pacid=37425194 polypeptide=PGSC0003DMP400051759 locus=PGSC0003DMG400029712 ID=PGSC0003DMT400076407.v4.03 annot-version=v4.03
Sequence

ATGCTGAGATTCCACTGTTTTTTCTTGTTTCTTTGCTTCTGCGTGGGTCTTCAGCTTGTC
TGCTCTCGCCATGATCCATATGTAATGCGAATAAGCTGTGGAGCTCGAGATGATGTTCAT
ACTTCCCCTACAAAGACTCTCTGGTATAAGGATTTTGCATATACAGGAGGGATACCTTTC
AATGGAACATCCCCAAGTTTCATTGCGCCTCAACTCACTACGCTGCGGTATTTCCCTTTA
TCGGAGGGACCTGAGAATTGTTACAATATCAAGAGAGTCCCCCATGGCCACTATTCAGTG
AGGATATTCTTTGGAATGGTTGTAGAACCAAGCTTTGATAATGAACCACTATTTGATGTT
TCTGTTGAAGGCACCTTGGTTTATACTTTGCCATCTGGTTGGAGCAATCATGACGATGAA
CAAGTATTTGTTGAAACACTTATTTTTCTTGATGATGGTACTGCCTCTCTTTGCTTCCAC
AGCACAGGTCATGGAGATCCAGCTATACTTGCAATTGAAATTCTCCAAGTAGATGACAGA
GCATACCATTTTGGTCCTGACTTTGGTAAAGGGACAATTATCAGAACTGTCAAAAGACTC
AGCTGTGGTGCTCAGGAATCATTGTTTGATGCTGACTACAGTGGTGATCATTGGGGTGGT
GATCGGTTTTGGAGTTCAATCAAGACATTTGGCCAGAATTCTGATCGCCGCATTTCTACC
AAAAACAGTACAAAGTCAACTTCCAAAGCACCAAACTTTTATCCAGGATCTATTTATCAA
ACTGCTCTTCTTAGCACTGACAATGAGCCAGAATTAACATACACAGTGGATGTCGATCCC
AATAAAAAGTACTCTGTTTGGTTACACTTTGCGGAAATTGATCCTTCAGTTACATCTGCG
GGACAGAGGGTCATGGACATTTCAATCAATGGTGACACTGTATTTCCAGATGTCGACATT
GTGAAGATGGCTGGGGGTGTTAACAGTGCTCTTGTGCTGAACACAACAGTTCCAATCAGT
GGCAGGACCTTGACAATCACACTGCAGCCAAAAAATGGAACTCATGCTATAATTAGTGCT
ATTGAAATTTTTGAGGTTATAATAGCTGAATCTAAAACGTTACTTGATGAAGTCAGGGGT
TTGCAGTCGCTAAAGAATGCACTTGGACTTCCCCTTCGGCTTGGATGGAATGGTGATCCA
TGTGTGCCCCAACAACATCCCTGGAGTGGAGCAGATTGTCAGTTTGACAAAACTAGCAAT
AAATGGGTCATCGACGGGATTGGCTTGGACAACCAAGGTTTAAGAGGCTTCTTACCAAAT
GAAATTTCTCGATTGCGTCATCTTCAGAGCATAAATCTAAGTGGGAACAGCATTCATGGA
CCTATTCCCCCGGCATTGGGAACGGTAACTAGTCTGGAGACATTGGATCTCTCATACAAT
TTCTTCAATGGATCGATTCCTGAAAGCCTCGGGCAATTGACCTCATTACGGACGCTGAAT
CTCAATGGCAACTCACTCTCTGGAAGGATTCCTGCTGCATTAGGTGGAAGGCTCTTGCAC
AGGGCTAAATTCAATTTCACTGATAATGCAGGTCTTTGTGGTATTCCGGGATTACCAACT
TGCGGAACACATCTCACAGTTGGAGCAAAAATTGGGATCGGATTAGGGGCGTGTGTATTT
GTCCTGCTTATTGCTACCTGCATTACATGCTGGTGGAAGAGACGGCAGAATATCCTCCGT
GTGCAAAGAATTGCTGCGAGAGATGCTCCATATGCAAAGTCGAGAACTCAATTCAATCGA
GATGTACAAATGGCAAGAAGCTATAGTCACGAACATACGCGAACAGCTGCTGAGAATGGA
CCTCCCTTGCTTACCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400051759
PEP Infomation

pacid=37425194 transcript=PGSC0003DMT400076407 locus=PGSC0003DMG400029712 ID=PGSC0003DMT400076407.v4.03 annot-version=v4.03
Sequence

MLRFHCFFLFLCFCVGLQLVCSRHDPYVMRISCGARDDVHTSPTKTLWYKDFAYTGGIPF
NGTSPSFIAPQLTTLRYFPLSEGPENCYNIKRVPHGHYSVRIFFGMVVEPSFDNEPLFDV
SVEGTLVYTLPSGWSNHDDEQVFVETLIFLDDGTASLCFHSTGHGDPAILAIEILQVDDR
AYHFGPDFGKGTIIRTVKRLSCGAQESLFDADYSGDHWGGDRFWSSIKTFGQNSDRRIST
KNSTKSTSKAPNFYPGSIYQTALLSTDNEPELTYTVDVDPNKKYSVWLHFAEIDPSVTSA
GQRVMDISINGDTVFPDVDIVKMAGGVNSALVLNTTVPISGRTLTITLQPKNGTHAIISA
IEIFEVIIAESKTLLDEVRGLQSLKNALGLPLRLGWNGDPCVPQQHPWSGADCQFDKTSN
KWVIDGIGLDNQGLRGFLPNEISRLRHLQSINLSGNSIHGPIPPALGTVTSLETLDLSYN
FFNGSIPESLGQLTSLRTLNLNGNSLSGRIPAALGGRLLHRAKFNFTDNAGLCGIPGLPT
CGTHLTVGAKIGIGLGACVFVLLIATCITCWWKRRQNILRVQRIAARDAPYAKSRTQFNR
DVQMARSYSHEHTRTAAENGPPLLT*

Transcript Sequence

Transcript ID

PGSC0003DMT400076407
Transcript Infomation

pacid=37425194 locus=PGSC0003DMG400029712 ID=PGSC0003DMT400076407.v4.03 annot-version=v4.03
Sequence

ATGCTGAGATTCCACTGTTTTTTCTTGTTTCTTTGCTTCTGCGTGGGTCTTCAGCTTGTC
TGCTCTCGCCATGATCCATATGTAATGCGAATAAGCTGTGGAGCTCGAGATGATGTTCAT
ACTTCCCCTACAAAGACTCTCTGGTATAAGGATTTTGCATATACAGGAGGGATACCTTTC
AATGGAACATCCCCAAGTTTCATTGCGCCTCAACTCACTACGCTGCGGTATTTCCCTTTA
TCGGAGGGACCTGAGAATTGTTACAATATCAAGAGAGTCCCCCATGGCCACTATTCAGTG
AGGATATTCTTTGGAATGGTTGTAGAACCAAGCTTTGATAATGAACCACTATTTGATGTT
TCTGTTGAAGGCACCTTGGTTTATACTTTGCCATCTGGTTGGAGCAATCATGACGATGAA
CAAGTATTTGTTGAAACACTTATTTTTCTTGATGATGGTACTGCCTCTCTTTGCTTCCAC
AGCACAGGTCATGGAGATCCAGCTATACTTGCAATTGAAATTCTCCAAGTAGATGACAGA
GCATACCATTTTGGTCCTGACTTTGGTAAAGGGACAATTATCAGAACTGTCAAAAGACTC
AGCTGTGGTGCTCAGGAATCATTGTTTGATGCTGACTACAGTGGTGATCATTGGGGTGGT
GATCGGTTTTGGAGTTCAATCAAGACATTTGGCCAGAATTCTGATCGCCGCATTTCTACC
AAAAACAGTACAAAGTCAACTTCCAAAGCACCAAACTTTTATCCAGGATCTATTTATCAA
ACTGCTCTTCTTAGCACTGACAATGAGCCAGAATTAACATACACAGTGGATGTCGATCCC
AATAAAAAGTACTCTGTTTGGTTACACTTTGCGGAAATTGATCCTTCAGTTACATCTGCG
GGACAGAGGGTCATGGACATTTCAATCAATGGTGACACTGTATTTCCAGATGTCGACATT
GTGAAGATGGCTGGGGGTGTTAACAGTGCTCTTGTGCTGAACACAACAGTTCCAATCAGT
GGCAGGACCTTGACAATCACACTGCAGCCAAAAAATGGAACTCATGCTATAATTAGTGCT
ATTGAAATTTTTGAGGTTATAATAGCTGAATCTAAAACGTTACTTGATGAAGTCAGGGGT
TTGCAGTCGCTAAAGAATGCACTTGGACTTCCCCTTCGGCTTGGATGGAATGGTGATCCA
TGTGTGCCCCAACAACATCCCTGGAGTGGAGCAGATTGTCAGTTTGACAAAACTAGCAAT
AAATGGGTCATCGACGGGATTGGCTTGGACAACCAAGGTTTAAGAGGCTTCTTACCAAAT
GAAATTTCTCGATTGCGTCATCTTCAGAGCATAAATCTAAGTGGGAACAGCATTCATGGA
CCTATTCCCCCGGCATTGGGAACGGTAACTAGTCTGGAGACATTGGATCTCTCATACAAT
TTCTTCAATGGATCGATTCCTGAAAGCCTCGGGCAATTGACCTCATTACGGACGCTGAAT
CTCAATGGCAACTCACTCTCTGGAAGGATTCCTGCTGCATTAGGTGGAAGGCTCTTGCAC
AGGGCTAAATTCAATTTCACTGATAATGCAGGTCTTTGTGGTATTCCGGGATTACCAACT
TGCGGAACACATCTCACAGTTGGAGCAAAAATTGGGATCGGATTAGGGGCGTGTGTATTT
GTCCTGCTTATTGCTACCTGCATTACATGCTGGTGGAAGAGACGGCAGAATATCCTCCGT
GTGCAAAGAATTGCTGCGAGAGATGCTCCATATGCAAAGTCGAGAACTCAATTCAATCGA
GATGTACAAATGGCAAGAAGCTATAGTCACGAACATACGCGAACAGCTGCTGAGAATGGA
CCTCCCTTGCTTACCTGA