Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076379
CDS Infomation

pacid=37427483 polypeptide=PGSC0003DMP400051737 locus=PGSC0003DMG400029702 ID=PGSC0003DMT400076379.v4.03 annot-version=v4.03
Sequence

ATGGATGATGATGAATTAAAGGCTTCTCTCGAGTCTTACCAGTTAATGGATCCATTGAGA
AGAGGCCCTTATCGTGCTCTTCAACTTGTCTCTGTTTTCATCTTTATCTTCCATAGCCTG
ACTGAGAGTGGGGATGGCTTGGATCCAAAGAAAGATAACAAGCAGCAATCTGCATTGACA
GAGCTGGCAGTAGCTGCTACTTTTATTTGTGCTGGTCGCCTCGTTGAGAAAGCTGCAACA
AGAAATAGCACACAAACTTGCCCCCTTTTACCCACCGTTTGTGTGTTTGTAGAGTGGTTA
GTTAACATACTTGATAGAGCAGAAGCACACGCAAGAGATGAAAAGGTCCAGAGTGCTATA
TCTTACTTTTTTGGTGCTTTAGCTGATCTTCTGAACCGGCTTGATCCTTGTGAGAATGAA
CTTGCTCTAGAAAGTACTGCTCTTTGGGAAGACCATGAACTGAAGGGGTTTCATCCCATG
GCCCATGCTCACAAGTCTTTGGACTTCACGAGCCATTTGGAATGCATTGATAATTTCAGT
AGTAAGAGTGTGTGTCGTTCACAGCGTATCTTTCGTGCAGCATCTAAACTGGCTCACAGA
TCCAGTCACTCAAGAAAATGGATCTCTTATGATAAAACAGACAAAAGATTCCACATCATG
GACTCAGAATTAGCAGATAGGGGAAAGCCAGGAGTAGCTGAATCTGTTTCGACTCTTCCG
CTAAAAGAGACCTATCAAAATAATTGTGGAATGGCAATGGAAAACGGAGAGAGTCAAGAT
CATCCTTGTCTCAGCAGCCAATCCGTTACCACAGATGAGGAAGAAGTCATTCTTTTCAAG
CCCATCACTAGACATAACTCAGAACCAATATATACATCAGGCACTTCATGTGATCAATTC
TCCATCAATGTTATCAATGGAACTGCGGCTTCTGATGAATCCTTGCGCCGTGCCACATCG
TTGATTTCTGAGCAAAGCAATCCACAGAATGATATTTTCAGTTTCCGTCCAGAAAGTACA
AACTTGAGGTACAACAAGCCGCTCAAGCAATCTGCAGCTTTCCCTGCTGGACCTCCATCT
CTGAATGCTTGGGTCCTTGAGAAGGAAAGTCCAAGAAATGAGAAGGGACTAAGGGAATTA
AATAGGCAGCAGTTAAGCCCAATTGATGAACTAGCTTCTGAATCTTTATCTGGTCTCTCC
TTGAATGAAACTAGAGATCACAACGTTCGTTCCATGCCAGTTTCTGCAGCTATTCATGAT
ACTCCTCCTCCGTATGTCACTCCAGTCCCCTCAGCTCCACTGTTACCGGAAGATGCATCT
TGGTTTAAGGGAAACTCATCAGTTTTCCCTAACAAGAGTGCATTTGGGACCAAGGAAGGG
GACGGTATTCTTGGTGCATCACCAGTGGGGGGATACTCAAGTCCATCTACAGTTCGTGGA
CCACTTGATTTTGTTGCAGGTGCTCCACGCTTTGTTGAGGGGTACCCACCATTACTTGGA
ATGAGTTCATCTGAATGGCTGTATCACTACAGAAATAGTCAAAACTTCGAGCGAGTCAGC
AATCTGGTATGGCCTGTTCACTCAAACGCACCAGCAACCTATGGAAACCTGAACGCGACC
AATCTTACCAGGTTTGATGTCTTAGATCAATGGGGAAATCACTTGGCTTCTAGTCCCATG
GTGTACTTGGAGAGCCCGCAGTTGCATCCAAGTCCTCCTCTTGCCTATGGTGCAGAAGAA
CAAATAATCGATAAACATTTTCTTGGTTACCAAAGAGCATCCCCGTATGTATGTGGCACT
GGAATGGACTTTAGACAGGAGCAGCCAACACTTCTTAACTATCTCAAAGAGAGAGAACGG
CAAATACCACCAGAGTCTCAATATAAAGGTCCTAATTTTATGGGAAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400051737
PEP Infomation

pacid=37427483 transcript=PGSC0003DMT400076379 locus=PGSC0003DMG400029702 ID=PGSC0003DMT400076379.v4.03 annot-version=v4.03
Sequence

MDDDELKASLESYQLMDPLRRGPYRALQLVSVFIFIFHSLTESGDGLDPKKDNKQQSALT
ELAVAATFICAGRLVEKAATRNSTQTCPLLPTVCVFVEWLVNILDRAEAHARDEKVQSAI
SYFFGALADLLNRLDPCENELALESTALWEDHELKGFHPMAHAHKSLDFTSHLECIDNFS
SKSVCRSQRIFRAASKLAHRSSHSRKWISYDKTDKRFHIMDSELADRGKPGVAESVSTLP
LKETYQNNCGMAMENGESQDHPCLSSQSVTTDEEEVILFKPITRHNSEPIYTSGTSCDQF
SINVINGTAASDESLRRATSLISEQSNPQNDIFSFRPESTNLRYNKPLKQSAAFPAGPPS
LNAWVLEKESPRNEKGLRELNRQQLSPIDELASESLSGLSLNETRDHNVRSMPVSAAIHD
TPPPYVTPVPSAPLLPEDASWFKGNSSVFPNKSAFGTKEGDGILGASPVGGYSSPSTVRG
PLDFVAGAPRFVEGYPPLLGMSSSEWLYHYRNSQNFERVSNLVWPVHSNAPATYGNLNAT
NLTRFDVLDQWGNHLASSPMVYLESPQLHPSPPLAYGAEEQIIDKHFLGYQRASPYVCGT
GMDFRQEQPTLLNYLKERERQIPPESQYKGPNFMGN*

Transcript Sequence

Transcript ID

PGSC0003DMT400076379
Transcript Infomation

pacid=37427483 locus=PGSC0003DMG400029702 ID=PGSC0003DMT400076379.v4.03 annot-version=v4.03
Sequence

ATGGATGATGATGAATTAAAGGCTTCTCTCGAGTCTTACCAGTTAATGGATCCATTGAGA
AGAGGCCCTTATCGTGCTCTTCAACTTGTCTCTGTTTTCATCTTTATCTTCCATAGCCTG
ACTGAGAGTGGGGATGGCTTGGATCCAAAGAAAGATAACAAGCAGCAATCTGCATTGACA
GAGCTGGCAGTAGCTGCTACTTTTATTTGTGCTGGTCGCCTCGTTGAGAAAGCTGCAACA
AGAAATAGCACACAAACTTGCCCCCTTTTACCCACCGTTTGTGTGTTTGTAGAGTGGTTA
GTTAACATACTTGATAGAGCAGAAGCACACGCAAGAGATGAAAAGGTCCAGAGTGCTATA
TCTTACTTTTTTGGTGCTTTAGCTGATCTTCTGAACCGGCTTGATCCTTGTGAGAATGAA
CTTGCTCTAGAAAGTACTGCTCTTTGGGAAGACCATGAACTGAAGGGGTTTCATCCCATG
GCCCATGCTCACAAGTCTTTGGACTTCACGAGCCATTTGGAATGCATTGATAATTTCAGT
AGTAAGAGTGTGTGTCGTTCACAGCGTATCTTTCGTGCAGCATCTAAACTGGCTCACAGA
TCCAGTCACTCAAGAAAATGGATCTCTTATGATAAAACAGACAAAAGATTCCACATCATG
GACTCAGAATTAGCAGATAGGGGAAAGCCAGGAGTAGCTGAATCTGTTTCGACTCTTCCG
CTAAAAGAGACCTATCAAAATAATTGTGGAATGGCAATGGAAAACGGAGAGAGTCAAGAT
CATCCTTGTCTCAGCAGCCAATCCGTTACCACAGATGAGGAAGAAGTCATTCTTTTCAAG
CCCATCACTAGACATAACTCAGAACCAATATATACATCAGGCACTTCATGTGATCAATTC
TCCATCAATGTTATCAATGGAACTGCGGCTTCTGATGAATCCTTGCGCCGTGCCACATCG
TTGATTTCTGAGCAAAGCAATCCACAGAATGATATTTTCAGTTTCCGTCCAGAAAGTACA
AACTTGAGGTACAACAAGCCGCTCAAGCAATCTGCAGCTTTCCCTGCTGGACCTCCATCT
CTGAATGCTTGGGTCCTTGAGAAGGAAAGTCCAAGAAATGAGAAGGGACTAAGGGAATTA
AATAGGCAGCAGTTAAGCCCAATTGATGAACTAGCTTCTGAATCTTTATCTGGTCTCTCC
TTGAATGAAACTAGAGATCACAACGTTCGTTCCATGCCAGTTTCTGCAGCTATTCATGAT
ACTCCTCCTCCGTATGTCACTCCAGTCCCCTCAGCTCCACTGTTACCGGAAGATGCATCT
TGGTTTAAGGGAAACTCATCAGTTTTCCCTAACAAGAGTGCATTTGGGACCAAGGAAGGG
GACGGTATTCTTGGTGCATCACCAGTGGGGGGATACTCAAGTCCATCTACAGTTCGTGGA
CCACTTGATTTTGTTGCAGGTGCTCCACGCTTTGTTGAGGGGTACCCACCATTACTTGGA
ATGAGTTCATCTGAATGGCTGTATCACTACAGAAATAGTCAAAACTTCGAGCGAGTCAGC
AATCTGGTATGGCCTGTTCACTCAAACGCACCAGCAACCTATGGAAACCTGAACGCGACC
AATCTTACCAGGTTTGATGTCTTAGATCAATGGGGAAATCACTTGGCTTCTAGTCCCATG
GTGTACTTGGAGAGCCCGCAGTTGCATCCAAGTCCTCCTCTTGCCTATGGTGCAGAAGAA
CAAATAATCGATAAACATTTTCTTGGTTACCAAAGAGCATCCCCGTATGTATGTGGCACT
GGAATGGACTTTAGACAGGAGCAGCCAACACTTCTTAACTATCTCAAAGAGAGAGAACGG
CAAATACCACCAGAGTCTCAATATAAAGGTCCTAATTTTATGGGAAACTAA