Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076352
CDS Infomation

pacid=37426999 polypeptide=PGSC0003DMP400051714 locus=PGSC0003DMG400029687 ID=PGSC0003DMT400076352.v4.03 annot-version=v4.03
Sequence

ATGAAACAGCTTTCTTTCTCTGCCTTACGGAAACAAAATCCAATACATTTTCAGAGAACC
ATAATCAACCGTTTCTATGGAACAACATCTACTAAACAAGATAAAAATCAGAAGCGTGAC
TGGGTTTTCGCAAGAATTGCACCTTTAGGTAGCCCAGACGTGTCTATGGTTCCAGTACTG
GAACAATGGGTTGAAGAAGGAAAAACAGTGGTGAAATCCGAGCTTCAGTGGATTATCAAA
AGATTAAACAGCTACAAAAGATACAAACATGCCCTTGAGGTGTCTCATTGGATGACGGAC
AGAAGATATTACCCCCTCCAACCTGCTGATGTTGCAGCACGAATCAACCTAATGAATAAA
GTTAAAGGTCTAGAAGAGGTTGAAAAATACTTCAATAGCATTCCACAGATGCTGAGACGC
CCTGAGGTGTATACTGCTCTTCTCAATTGCTATACCAATGAGAAGTCTGTAGAGAAAGCT
GAGGCCATAATGCAACAACTAAGAGATATGGGGTTTGCTAAGGGTACATTGTGCTACAAC
CATATGATGAACCTCTATTATAAAACAGGAACATGGGAGAAAATGGATAATATGATGAAT
GAAATGGAGCAGAAGGGCGTAAATTTTGATGAGTTCACGCTCACAATACGATTAACTGCA
TATGCTGCTGCTGGAGATTCTGAGGGAATGGATAAAATATTAGCGATAATGGAATCTGAT
AAGCAAATCATTTTGCACTGGGATACTTACAGTATTGCAGCAGAGTTGTATTTGAAAGTT
GGGCAGGTGGAAAAAGCTCTAGAGTTGCTGAGTAAACTTGAAAGCATGATTTTGAATCAT
GAGAAAAGTAATGGTGCATATAATTGTTTGTTAAAACTGTATGCGGAAGCTGGAAAGAAA
GAAGAGGTGCACCGAGTGTGGGATTTGTATAAGCAGAACATGAGAATTCTTAATAAAGGT
TACATTACTGTGATGAGCGCATTAATGAAATTTGGTGATACAACAGAAGGAGTTGAGAAG
ATCTTTGAGGAATGGGAATCCGAAGCTTTGTCCTATGATTTCCGTGTTCCAGATGTTTTG
ATTCGCAGTTATTGTAGAAATGGTCTTCTGGAGAAGGCTAAGGCCCTAATGGACAAAGGA
ATATCAAAAGGGGGTGTTCCATGGGTCACCACATGGTGTCACTTGGCAAATGGATACATA
CATGAAGATCTAGTCCCAGAGGCTGTAGAAGCATTGAAGAAGGCCATCTCAATATGCCCG
CCTAATTATAAACCTAGCAAGGAGACCTTAGCTACATGTGTAAAATACTGGGAAAAGCAG
GGAAATGTGGATAACGCAGCGGATTTTGTGAGGTGTTTAGAACAGGACCATATCTTCTCA
CCAGTTTTTCGTGACAAGTTGTTGTGCTTTATTAAGGAAGAAAAACTTCAAACCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400051714
PEP Infomation

pacid=37426999 transcript=PGSC0003DMT400076352 locus=PGSC0003DMG400029687 ID=PGSC0003DMT400076352.v4.03 annot-version=v4.03
Sequence

MKQLSFSALRKQNPIHFQRTIINRFYGTTSTKQDKNQKRDWVFARIAPLGSPDVSMVPVL
EQWVEEGKTVVKSELQWIIKRLNSYKRYKHALEVSHWMTDRRYYPLQPADVAARINLMNK
VKGLEEVEKYFNSIPQMLRRPEVYTALLNCYTNEKSVEKAEAIMQQLRDMGFAKGTLCYN
HMMNLYYKTGTWEKMDNMMNEMEQKGVNFDEFTLTIRLTAYAAAGDSEGMDKILAIMESD
KQIILHWDTYSIAAELYLKVGQVEKALELLSKLESMILNHEKSNGAYNCLLKLYAEAGKK
EEVHRVWDLYKQNMRILNKGYITVMSALMKFGDTTEGVEKIFEEWESEALSYDFRVPDVL
IRSYCRNGLLEKAKALMDKGISKGGVPWVTTWCHLANGYIHEDLVPEAVEALKKAISICP
PNYKPSKETLATCVKYWEKQGNVDNAADFVRCLEQDHIFSPVFRDKLLCFIKEEKLQT*

Transcript Sequence

Transcript ID

PGSC0003DMT400076352
Transcript Infomation

pacid=37426999 locus=PGSC0003DMG400029687 ID=PGSC0003DMT400076352.v4.03 annot-version=v4.03
Sequence

ATGAAACAGCTTTCTTTCTCTGCCTTACGGAAACAAAATCCAATACATTTTCAGAGAACC
ATAATCAACCGTTTCTATGGAACAACATCTACTAAACAAGATAAAAATCAGAAGCGTGAC
TGGGTTTTCGCAAGAATTGCACCTTTAGGTAGCCCAGACGTGTCTATGGTTCCAGTACTG
GAACAATGGGTTGAAGAAGGAAAAACAGTGGTGAAATCCGAGCTTCAGTGGATTATCAAA
AGATTAAACAGCTACAAAAGATACAAACATGCCCTTGAGGTGTCTCATTGGATGACGGAC
AGAAGATATTACCCCCTCCAACCTGCTGATGTTGCAGCACGAATCAACCTAATGAATAAA
GTTAAAGGTCTAGAAGAGGTTGAAAAATACTTCAATAGCATTCCACAGATGCTGAGACGC
CCTGAGGTGTATACTGCTCTTCTCAATTGCTATACCAATGAGAAGTCTGTAGAGAAAGCT
GAGGCCATAATGCAACAACTAAGAGATATGGGGTTTGCTAAGGGTACATTGTGCTACAAC
CATATGATGAACCTCTATTATAAAACAGGAACATGGGAGAAAATGGATAATATGATGAAT
GAAATGGAGCAGAAGGGCGTAAATTTTGATGAGTTCACGCTCACAATACGATTAACTGCA
TATGCTGCTGCTGGAGATTCTGAGGGAATGGATAAAATATTAGCGATAATGGAATCTGAT
AAGCAAATCATTTTGCACTGGGATACTTACAGTATTGCAGCAGAGTTGTATTTGAAAGTT
GGGCAGGTGGAAAAAGCTCTAGAGTTGCTGAGTAAACTTGAAAGCATGATTTTGAATCAT
GAGAAAAGTAATGGTGCATATAATTGTTTGTTAAAACTGTATGCGGAAGCTGGAAAGAAA
GAAGAGGTGCACCGAGTGTGGGATTTGTATAAGCAGAACATGAGAATTCTTAATAAAGGT
TACATTACTGTGATGAGCGCATTAATGAAATTTGGTGATACAACAGAAGGAGTTGAGAAG
ATCTTTGAGGAATGGGAATCCGAAGCTTTGTCCTATGATTTCCGTGTTCCAGATGTTTTG
ATTCGCAGTTATTGTAGAAATGGTCTTCTGGAGAAGGCTAAGGCCCTAATGGACAAAGGA
ATATCAAAAGGGGGTGTTCCATGGGTCACCACATGGTGTCACTTGGCAAATGGATACATA
CATGAAGATCTAGTCCCAGAGGCTGTAGAAGCATTGAAGAAGGCCATCTCAATATGCCCG
CCTAATTATAAACCTAGCAAGGAGACCTTAGCTACATGTGTAAAATACTGGGAAAAGCAG
GGAAATGTGGATAACGCAGCGGATTTTGTGAGGTGTTTAGAACAGGACCATATCTTCTCA
CCAGTTTTTCGTGACAAGTTGTTGTGCTTTATTAAGGAAGAAAAACTTCAAACCTAA