Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076344
CDS Infomation

pacid=37451272 polypeptide=PGSC0003DMP400051708 locus=PGSC0003DMG400029682 ID=PGSC0003DMT400076344.v4.03 annot-version=v4.03
Sequence

ATGGATGAAGAAGCAATTATTCTGATTCAAGCAATAAATTCCATCAAAACAATCATAAAA
CATGAACACTCAAGTCATGACAAAGTGATTGTTCATTTGGCTCGTAAGTTGGATTCTATC
CGAGTACCAAGTGCACGTGCAATGATTATTTGGATGTTGGGCGAGTATAACTCCATGGGA
CATATAATTCCAAAGGTGTTACCCACAGTTCTCAAGTATCTTGCTTGGACTTTTTCTTCT
GAAGCACTTGAAACGAAGCTCCAGATTCTTAATGCCATGGTCAAGGTCTTATTACATGCA
GAAGGGGAAGCACTATCAACCTTCAAGACACTCTTAAACTATGTACTTGAACTAGCTAAA
TGTGACTTGAACTATGATATCCGTGACCGTGGACGTCTTCTACAGAAACTCTTATCTCAC
TACATAGGCACTCATGAGTTGGAAGAATCACCTCCTGATAGCACATTGCATGTACTCACT
GGACATTTATTTGGGAGAGAAATAAAACCCATACCTTCAGAACCATTAGCTTATCGTTTT
TATCTTCCTGGATCTCTTTCACAGATGGTTCTTCATGCTGCTCCAGGATATGAACCTCTC
CCACAGCCATTAAGTTTGATCTGCAATGATACTACTCATGAACCCAATATGGTAATAGGT
ATGAAACAACCAGGGAATGGAGCCACTCAAAGTGAATCGTATGAAACTGATGATGCTGAC
ACAGTATCTGGATCACTAAATGAAGAAAGCACCTCTGGTTACAATTCTCAAGATTCTAGA
ACTGGTTCAAGTGGAACTCACGGTAGCCACAGGAGTGGGTCTGTGAGTGATGATGATGAG
CATGCTGGTCCACTGATTCATCTTTCTGACAGTGGCAATGCTCATGGGAATCAGTTGGGA
CCAAGGTTTAATCAAAATTCTGACTCCAATGATCTTGGGGAATTAATGTCGATAAAATCT
CTTGAATCCTGGTTGGATGACAATCCTGGTTCTACCCATAATTCGGTAGAATTAAATAAT
GTCTGTCAATCATTGGCCAGAATTTCAATTGGAGATCTTAGTAGCAGAGTGAAACCTAAG
TCCTACACTTTGTTAGATCCTGCAAATGGAAACGGCTTGAGTGTGGAATACATATTTTCA
TCAGAGGTGTCAAGCATATCTCCTCTGCTTGTTTGTATTCAGGTCATATTTACCAACAAT
TCAGTGGAAGCTATGTCAAATATACAGTTGATCGAAGAGGATTCTGGCATGAGGGTAGAA
TCTTCAGATCATGTGCTGACATCAGATGAGAGTTCCAAGATGTCTGTTAATGATGTGCCG
ACTCTAGTTCCAATGGAAGAAATTACTAAGCTGGAGCGAGGTCAGGTTATGCAGAGAACG
CTTCAGGTCTGGTTCCACCATCATCTGTTGCCCCTTAAGCTGCTTTTATGGTGCAATGGC
AAGAAGTATCCTGTGAAGTTGAGACCTGATATTGGGTATTTTGTAAAACCTCTTCCAATG
GAAATCGATATGTTCTCAATCAAGGAATCTCAGCTGCCTGGAATGTTTGAATATATAAGG
AGGTGTACTTTCATTGACCATATTGAAGAACTTAACAAGCTTGAAAGCCCCTTAGCAAAG
GATAACTTCCTTGTAATCTGTGAAACTTTGGCTTTAAAGGTGCTTAGTAATTCCAATCTT
TTTCATCTATCCGTGGACATGCCTGTTGGTACCGACCTCGATGATGCGTCAGGTTTACAG
CTTAGGTTCAGTGGTGAGATATTAAGCAACTCAATCCCATGTTTAATTACTATTACTGTT
GAAGGTAGATGCTCCGAACCGCTGGACAGTAAAGTAAAAGTCAACTGCGAAGAGACTGTT
TTTGGCCTGAACTTTTTGAACAGGGTTGTGAATTTTTTGACTGAGCCTGCTCGATTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400051708
PEP Infomation

pacid=37451272 transcript=PGSC0003DMT400076344 locus=PGSC0003DMG400029682 ID=PGSC0003DMT400076344.v4.03 annot-version=v4.03
Sequence

MDEEAIILIQAINSIKTIIKHEHSSHDKVIVHLARKLDSIRVPSARAMIIWMLGEYNSMG
HIIPKVLPTVLKYLAWTFSSEALETKLQILNAMVKVLLHAEGEALSTFKTLLNYVLELAK
CDLNYDIRDRGRLLQKLLSHYIGTHELEESPPDSTLHVLTGHLFGREIKPIPSEPLAYRF
YLPGSLSQMVLHAAPGYEPLPQPLSLICNDTTHEPNMVIGMKQPGNGATQSESYETDDAD
TVSGSLNEESTSGYNSQDSRTGSSGTHGSHRSGSVSDDDEHAGPLIHLSDSGNAHGNQLG
PRFNQNSDSNDLGELMSIKSLESWLDDNPGSTHNSVELNNVCQSLARISIGDLSSRVKPK
SYTLLDPANGNGLSVEYIFSSEVSSISPLLVCIQVIFTNNSVEAMSNIQLIEEDSGMRVE
SSDHVLTSDESSKMSVNDVPTLVPMEEITKLERGQVMQRTLQVWFHHHLLPLKLLLWCNG
KKYPVKLRPDIGYFVKPLPMEIDMFSIKESQLPGMFEYIRRCTFIDHIEELNKLESPLAK
DNFLVICETLALKVLSNSNLFHLSVDMPVGTDLDDASGLQLRFSGEILSNSIPCLITITV
EGRCSEPLDSKVKVNCEETVFGLNFLNRVVNFLTEPARL*

Transcript Sequence

Transcript ID

PGSC0003DMT400076344
Transcript Infomation

pacid=37451272 locus=PGSC0003DMG400029682 ID=PGSC0003DMT400076344.v4.03 annot-version=v4.03
Sequence

ATGGATGAAGAAGCAATTATTCTGATTCAAGCAATAAATTCCATCAAAACAATCATAAAA
CATGAACACTCAAGTCATGACAAAGTGATTGTTCATTTGGCTCGTAAGTTGGATTCTATC
CGAGTACCAAGTGCACGTGCAATGATTATTTGGATGTTGGGCGAGTATAACTCCATGGGA
CATATAATTCCAAAGGTGTTACCCACAGTTCTCAAGTATCTTGCTTGGACTTTTTCTTCT
GAAGCACTTGAAACGAAGCTCCAGATTCTTAATGCCATGGTCAAGGTCTTATTACATGCA
GAAGGGGAAGCACTATCAACCTTCAAGACACTCTTAAACTATGTACTTGAACTAGCTAAA
TGTGACTTGAACTATGATATCCGTGACCGTGGACGTCTTCTACAGAAACTCTTATCTCAC
TACATAGGCACTCATGAGTTGGAAGAATCACCTCCTGATAGCACATTGCATGTACTCACT
GGACATTTATTTGGGAGAGAAATAAAACCCATACCTTCAGAACCATTAGCTTATCGTTTT
TATCTTCCTGGATCTCTTTCACAGATGGTTCTTCATGCTGCTCCAGGATATGAACCTCTC
CCACAGCCATTAAGTTTGATCTGCAATGATACTACTCATGAACCCAATATGGTAATAGGT
ATGAAACAACCAGGGAATGGAGCCACTCAAAGTGAATCGTATGAAACTGATGATGCTGAC
ACAGTATCTGGATCACTAAATGAAGAAAGCACCTCTGGTTACAATTCTCAAGATTCTAGA
ACTGGTTCAAGTGGAACTCACGGTAGCCACAGGAGTGGGTCTGTGAGTGATGATGATGAG
CATGCTGGTCCACTGATTCATCTTTCTGACAGTGGCAATGCTCATGGGAATCAGTTGGGA
CCAAGGTTTAATCAAAATTCTGACTCCAATGATCTTGGGGAATTAATGTCGATAAAATCT
CTTGAATCCTGGTTGGATGACAATCCTGGTTCTACCCATAATTCGGTAGAATTAAATAAT
GTCTGTCAATCATTGGCCAGAATTTCAATTGGAGATCTTAGTAGCAGAGTGAAACCTAAG
TCCTACACTTTGTTAGATCCTGCAAATGGAAACGGCTTGAGTGTGGAATACATATTTTCA
TCAGAGGTGTCAAGCATATCTCCTCTGCTTGTTTGTATTCAGGTCATATTTACCAACAAT
TCAGTGGAAGCTATGTCAAATATACAGTTGATCGAAGAGGATTCTGGCATGAGGGTAGAA
TCTTCAGATCATGTGCTGACATCAGATGAGAGTTCCAAGATGTCTGTTAATGATGTGCCG
ACTCTAGTTCCAATGGAAGAAATTACTAAGCTGGAGCGAGGTCAGGTTATGCAGAGAACG
CTTCAGGTCTGGTTCCACCATCATCTGTTGCCCCTTAAGCTGCTTTTATGGTGCAATGGC
AAGAAGTATCCTGTGAAGTTGAGACCTGATATTGGGTATTTTGTAAAACCTCTTCCAATG
GAAATCGATATGTTCTCAATCAAGGAATCTCAGCTGCCTGGAATGTTTGAATATATAAGG
AGGTGTACTTTCATTGACCATATTGAAGAACTTAACAAGCTTGAAAGCCCCTTAGCAAAG
GATAACTTCCTTGTAATCTGTGAAACTTTGGCTTTAAAGGTGCTTAGTAATTCCAATCTT
TTTCATCTATCCGTGGACATGCCTGTTGGTACCGACCTCGATGATGCGTCAGGTTTACAG
CTTAGGTTCAGTGGTGAGATATTAAGCAACTCAATCCCATGTTTAATTACTATTACTGTT
GAAGGTAGATGCTCCGAACCGCTGGACAGTAAAGTAAAAGTCAACTGCGAAGAGACTGTT
TTTGGCCTGAACTTTTTGAACAGGGTTGTGAATTTTTTGACTGAGCCTGCTCGATTGTGA