Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076255
CDS Infomation

pacid=37455851 polypeptide=PGSC0003DMP400051652 locus=PGSC0003DMG400029647 ID=PGSC0003DMT400076255.v4.03 annot-version=v4.03
Sequence

ATGGATCATTTGAGTAGTGATAATCAATGGGATATTCCTGATACCCCTAATAGATTAGCT
GCTAAGGATATGAATGGGAGGAGGTATGCCAATGTAGAGAGTGATTTGTCTGCATCAGGG
AATTCAGTAAATGGGAATGGTGCTGCTGAGAATGGGAATCAACTTAATGATAATGGTTTT
GGAAGAAAAAGGTTGTTTATGCGTCCTCCAAGAAGAATTTCCATGAAATCTGAATGCGAT
GCGAATTCATCAGCTTTTGGTATGGGAGATTCTTTGCCTTCAAGAAATGGTGTTCCATTC
AAGGTTTCCTCAATTCCTAATTCCAAGGAGAAACATAACTTGCATCTTGCTAAAAATGGA
ATCACAGAATCAAAAAGTCAGCAAGACCGTCCTGTCATAGACCTGACAAAGCAAAGTGGG
TCGTCGACTCGTGTATTTGTCAAGTCTCCAGCAGTTGGAGTACAGAATATTGGTCGAGAT
GAAAAATATAGATCGATGAATGAACACTCTAATTTTCACAGGATGACTTCCACACCATCC
AGCAGTACCAACAAAGGAAAGGAAATTGCTGATCTAGTTAAACTTGGTTTAAATAAATCT
CATGGAGAAAAGGATTCTGCCATTGATGCACAGCTTGGAGCTCGGAAGGATGGTTCTACA
TCTCTTGCTAACTCACCAAGAGTAACTGGGCAGAAAAGATTGGTCCGAAATGGATGTATA
TCCCCTATGAACATAGCTAAGACTAAAAAGCCAGCTGAGATGGAGGATAACAGTATTTTA
ATCCATGGGCTAACTGATACCAGTCTTACAGCATCATCCGCTGGTACAAGCTCAGATAGT
GCTAAAGAAATAATATCTAAAGATGGTATTTCTGCAGTAAAGGGTAAGGGGGTGGTAATC
CATTCTTCCCCTTCAAAAGAACATGACACAATACATACGTCTAGCAGTGATTCCAGTAGA
GATGTGTTCAGAAGCTTTGACGAATCAGGGGGATGGAGAAGTACGCGTATCCGCAGTTCA
AACATGAACTTGTCATTGCCCAATCTGCACAGGACTTCAGAAAGAGATAGTGCACACTTT
GTCTCTCATCCCAGTGGGAGTAGGGTGATGAGAAGAGATGATGCAACTAGTTGTCAAGAT
TCAGCTTCTATTAGACATTTTTCTGGTGTATCTGCAGGGCCGGAGGGACCCCCTTCTGCA
CCTCAATGTCGCCAAATTAATGGACATCGTACTGCACCAAGCACAGTTAAGAAAAGACTA
AAGCAAGGACCTGCCTCAAGCAGCCATGGTGAATGTTCTACATCAGTCTCTAATGATGTA
GACATCATTTGCCTTACCTCACCTGAAAGTAGGGTTAATACAAGGTCCACAAGAAACCCA
AGTCATGTAGGTACAGGCGTAGAACCAGTAATTGTAGTGGACAGTCCTTCCTCTACCACA
AGACATGAAGGCTCTCGTGTTGCGTGTAGCAGTAGTAGGAATGAAGATGCTAGAGCCAGT
CAAGTAGATGCAGACGAAAGGCTTGCACGGGAACTCCAGGAGCAGTTGTACAATGAGGTC
CCTTCCTTTGGTGTTGGTGAGATTGATGAAGATGTAGCCTTGGCTTTAGTGCAGGAGGAT
TTCCGACGTGCTTCCTCTGGATTAGAGAACCAATTATCTGGTCTTAATGGATCATCGGTC
ACAAACTTACGCAGAAGGCAACCAAGAAATGTATCCAACATATCTCGTAGAGCTTCTCAA
GCTCGGGCGTCTACCTCGAATAGGATGACAAGGTTGAGGAACAGTTTCCCTGGACAACCT
CGTACTATCTCATCATCTAGAGGAAGAAATTCACTGTTTCCTCCTAACATGGATGTGGAC
ATGAGGATGCATATATTGGAAACCTTAGAGGCTTTCAGTAATATGGATGTGGACAGGAAC
CTCCTTCAGACGCAGCGCGACTTCAATGAGAATGACTACGAAATGTTATTGGCCCTTGAT
GAGGACAACCACCAACATGGTGGTTCATCTTCACGACAAATCAACAACTTGCCACAGTCA
ACAGTTCAGAATGAGAGTCTTCAAGAACCGTGTGCTGTTTGTCTCGAAACTCCAACCATA
GGGGACGTTATCCGCCATCTCCCTTGCTTACACAAGTTTCACAAAGACTGCATTGATCCA
TGGCTGAGTAGAAAAACATCATGCCCAGTTTGCAAGTGTTCGATCTCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400051652
PEP Infomation

pacid=37455851 transcript=PGSC0003DMT400076255 locus=PGSC0003DMG400029647 ID=PGSC0003DMT400076255.v4.03 annot-version=v4.03
Sequence

MDHLSSDNQWDIPDTPNRLAAKDMNGRRYANVESDLSASGNSVNGNGAAENGNQLNDNGF
GRKRLFMRPPRRISMKSECDANSSAFGMGDSLPSRNGVPFKVSSIPNSKEKHNLHLAKNG
ITESKSQQDRPVIDLTKQSGSSTRVFVKSPAVGVQNIGRDEKYRSMNEHSNFHRMTSTPS
SSTNKGKEIADLVKLGLNKSHGEKDSAIDAQLGARKDGSTSLANSPRVTGQKRLVRNGCI
SPMNIAKTKKPAEMEDNSILIHGLTDTSLTASSAGTSSDSAKEIISKDGISAVKGKGVVI
HSSPSKEHDTIHTSSSDSSRDVFRSFDESGGWRSTRIRSSNMNLSLPNLHRTSERDSAHF
VSHPSGSRVMRRDDATSCQDSASIRHFSGVSAGPEGPPSAPQCRQINGHRTAPSTVKKRL
KQGPASSSHGECSTSVSNDVDIICLTSPESRVNTRSTRNPSHVGTGVEPVIVVDSPSSTT
RHEGSRVACSSSRNEDARASQVDADERLARELQEQLYNEVPSFGVGEIDEDVALALVQED
FRRASSGLENQLSGLNGSSVTNLRRRQPRNVSNISRRASQARASTSNRMTRLRNSFPGQP
RTISSSRGRNSLFPPNMDVDMRMHILETLEAFSNMDVDRNLLQTQRDFNENDYEMLLALD
EDNHQHGGSSSRQINNLPQSTVQNESLQEPCAVCLETPTIGDVIRHLPCLHKFHKDCIDP
WLSRKTSCPVCKCSIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400076255
Transcript Infomation

pacid=37455851 locus=PGSC0003DMG400029647 ID=PGSC0003DMT400076255.v4.03 annot-version=v4.03
Sequence

ATGGATCATTTGAGTAGTGATAATCAATGGGATATTCCTGATACCCCTAATAGATTAGCT
GCTAAGGATATGAATGGGAGGAGGTATGCCAATGTAGAGAGTGATTTGTCTGCATCAGGG
AATTCAGTAAATGGGAATGGTGCTGCTGAGAATGGGAATCAACTTAATGATAATGGTTTT
GGAAGAAAAAGGTTGTTTATGCGTCCTCCAAGAAGAATTTCCATGAAATCTGAATGCGAT
GCGAATTCATCAGCTTTTGGTATGGGAGATTCTTTGCCTTCAAGAAATGGTGTTCCATTC
AAGGTTTCCTCAATTCCTAATTCCAAGGAGAAACATAACTTGCATCTTGCTAAAAATGGA
ATCACAGAATCAAAAAGTCAGCAAGACCGTCCTGTCATAGACCTGACAAAGCAAAGTGGG
TCGTCGACTCGTGTATTTGTCAAGTCTCCAGCAGTTGGAGTACAGAATATTGGTCGAGAT
GAAAAATATAGATCGATGAATGAACACTCTAATTTTCACAGGATGACTTCCACACCATCC
AGCAGTACCAACAAAGGAAAGGAAATTGCTGATCTAGTTAAACTTGGTTTAAATAAATCT
CATGGAGAAAAGGATTCTGCCATTGATGCACAGCTTGGAGCTCGGAAGGATGGTTCTACA
TCTCTTGCTAACTCACCAAGAGTAACTGGGCAGAAAAGATTGGTCCGAAATGGATGTATA
TCCCCTATGAACATAGCTAAGACTAAAAAGCCAGCTGAGATGGAGGATAACAGTATTTTA
ATCCATGGGCTAACTGATACCAGTCTTACAGCATCATCCGCTGGTACAAGCTCAGATAGT
GCTAAAGAAATAATATCTAAAGATGGTATTTCTGCAGTAAAGGGTAAGGGGGTGGTAATC
CATTCTTCCCCTTCAAAAGAACATGACACAATACATACGTCTAGCAGTGATTCCAGTAGA
GATGTGTTCAGAAGCTTTGACGAATCAGGGGGATGGAGAAGTACGCGTATCCGCAGTTCA
AACATGAACTTGTCATTGCCCAATCTGCACAGGACTTCAGAAAGAGATAGTGCACACTTT
GTCTCTCATCCCAGTGGGAGTAGGGTGATGAGAAGAGATGATGCAACTAGTTGTCAAGAT
TCAGCTTCTATTAGACATTTTTCTGGTGTATCTGCAGGGCCGGAGGGACCCCCTTCTGCA
CCTCAATGTCGCCAAATTAATGGACATCGTACTGCACCAAGCACAGTTAAGAAAAGACTA
AAGCAAGGACCTGCCTCAAGCAGCCATGGTGAATGTTCTACATCAGTCTCTAATGATGTA
GACATCATTTGCCTTACCTCACCTGAAAGTAGGGTTAATACAAGGTCCACAAGAAACCCA
AGTCATGTAGGTACAGGCGTAGAACCAGTAATTGTAGTGGACAGTCCTTCCTCTACCACA
AGACATGAAGGCTCTCGTGTTGCGTGTAGCAGTAGTAGGAATGAAGATGCTAGAGCCAGT
CAAGTAGATGCAGACGAAAGGCTTGCACGGGAACTCCAGGAGCAGTTGTACAATGAGGTC
CCTTCCTTTGGTGTTGGTGAGATTGATGAAGATGTAGCCTTGGCTTTAGTGCAGGAGGAT
TTCCGACGTGCTTCCTCTGGATTAGAGAACCAATTATCTGGTCTTAATGGATCATCGGTC
ACAAACTTACGCAGAAGGCAACCAAGAAATGTATCCAACATATCTCGTAGAGCTTCTCAA
GCTCGGGCGTCTACCTCGAATAGGATGACAAGGTTGAGGAACAGTTTCCCTGGACAACCT
CGTACTATCTCATCATCTAGAGGAAGAAATTCACTGTTTCCTCCTAACATGGATGTGGAC
ATGAGGATGCATATATTGGAAACCTTAGAGGCTTTCAGTAATATGGATGTGGACAGGAAC
CTCCTTCAGACGCAGCGCGACTTCAATGAGAATGACTACGAAATGTTATTGGCCCTTGAT
GAGGACAACCACCAACATGGTGGTTCATCTTCACGACAAATCAACAACTTGCCACAGTCA
ACAGTTCAGAATGAGAGTCTTCAAGAACCGTGTGCTGTTTGTCTCGAAACTCCAACCATA
GGGGACGTTATCCGCCATCTCCCTTGCTTACACAAGTTTCACAAAGACTGCATTGATCCA
TGGCTGAGTAGAAAAACATCATGCCCAGTTTGCAAGTGTTCGATCTCTTAA