Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076190
CDS Infomation

pacid=37455787 polypeptide=PGSC0003DMP400051595 locus=PGSC0003DMG400029625 ID=PGSC0003DMT400076190.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTATTGATGTTTCGAAATATGCACATAGCCCTGTGCATAAAGGTATAGTCTTG
AAAGATTATCCTTCTTTGAGGAAGATAATTGCTGCGTTGCCTCGGCTTTGTGATCCTGCT
GAGATTCATACTGAAGCAGTATCGCTGGCTGAGGAAGCTAAGGCTGATGCTATTTCTGCA
GTGATTGATCAACGGGATGTCCCTAACCGGGATAGTCCTCTTCATTTGGCTGTCAAACTT
GGTGATGAGACTGCAACCGAGATGCTTATGCTTGCTGGTGCTGATTGGAGCTTGCAGAAT
GAACATGGATGGAGTGCCTTGCAGGAGGCAATATGTAATAGGGAAGAAAGGATTGCGAAG
ATCATAGTTAGGCACTACCAGCCTTTGGCTTGGGCAAAATGGTGTAGAAGGTTGCCCCGG
TTGATTGGGACGATGAAGAGGATGAGGGATTTTTATATGGAAATAACATTTCACTTTGAG
AGCTCTGTTATACCTTTCATTTCTAGGATTGCCCCTTCAGATACATATAAGATTTGGAAG
AGGGGTGCAAATTTAAGGGCTGATATGACACTGGCTGGCTTTGATGGCTTCCGAATTCAG
CGATCAGATCAGAGCATTCTTTTCCTTGGAGATGGTTCTGAGGATGGTAAAGTTGCTCCT
GGATCACTTTGCATGATCTCACATAAAGAGAAGGAAATTATGAATGCTTTAGACGGTGCT
GGTGCTCCAGCGACTGACGCAGAAGTACAGCAAGAAGTTGCTGCAATGTCTCAAACTAAC
ATATTCAGGCCTGGGATTGATGTCACTGAGGCAGTTCTGTTGCCACAAACGACATGGAGG
CGCCAGGAGAAAACTGAGATGGTAGGTTCTTGGAAAGCTAAAGTATATGATATGCATAAT
GTGGTTGTGAGCATAAAATCAAGGATGGTTCCTGGAGCTATGACGGATGATGAATTTTTC
AATTCTTGCAATGAAAATGAAGCAGAGAGTGAAGAGTTTGATGATATCCTGACAGAGGAA
GAAAGAAGGCAGCTTGAGGTTGCTCTCAAGTCAGACTCTTCAGATTTAAGCAATGAGAAT
GGAGATGGGATCATTCCACATCGCCATAGTTGTTATGAACAAAGAGATATTCCCATTGAG
GAGTTAAATGGTTGCAGAAATGACGATAATAAGCAGGAAAAGAAGAGGTGGTTTAACAGC
TGGAGGAAACGGGATATTAAACCAGAAGGGGAGAAACGAGTTGTCCCACCAAGAAGTTCC
ATATGTGTTGAGGAGAAGGTTGGCAATTATCTTGAGGGTTCTTCGCCTTTAAATGAAACT
AGGCCAGGGAGGCATTCTGTGGATGTCAGGGTGACGAGGGACGAGCTTAGACAAGGAAGG
GATGCAAAGGCTTCTACATCTAGCAATGCTGAAAATGGAAATCGGCGTAAAGATGGAAGC
CGAGAAAATGAGTATAAGAAAGGACTGAGGCCTGTTCTTTGGCTTTCTCCAGATTTCCCG
TTGAGAACCGAAGAGCTCCTTCCTTTGCTTGACATTCTAGCTAACAAAGTTAAAGCTATC
CGGCGGTTGAGGGAAATTCTCACAACAAAACTTCCAAAAGGAACCTTCCCAGTAAAGGTA
GCAATTCCAGTTGTTCCAACGATTAGAGTATTGGTGACATTCACTAAATTTGAAGAATTG
CAGCCACTAGATGAGTTTGCAACTCCTCCTTCCAGCCCTACTGCTTCGGGCAGGGAGAGT
CCATCAGGGGCACAGCCTTCAAGTTCATCATGGTTTCAGTGGATAAAAGCCCCATATCAA
CGTCCTGGTTCTTCTACAGGCAGTCCAAGTAATAGGATCGAAAACATTCAAGATCCCTTT
GTAGTCCCTCAAGATTACACATGGATATCAGCAGAAGCAAAGAGAAAGAAAATGCAAGAA
AAGGATAAGGCAAAGAAAGGAAAGAGTAGGAAACAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400051595
PEP Infomation

pacid=37455787 transcript=PGSC0003DMT400076190 locus=PGSC0003DMG400029625 ID=PGSC0003DMT400076190.v4.03 annot-version=v4.03
Sequence

MAGIDVSKYAHSPVHKGIVLKDYPSLRKIIAALPRLCDPAEIHTEAVSLAEEAKADAISA
VIDQRDVPNRDSPLHLAVKLGDETATEMLMLAGADWSLQNEHGWSALQEAICNREERIAK
IIVRHYQPLAWAKWCRRLPRLIGTMKRMRDFYMEITFHFESSVIPFISRIAPSDTYKIWK
RGANLRADMTLAGFDGFRIQRSDQSILFLGDGSEDGKVAPGSLCMISHKEKEIMNALDGA
GAPATDAEVQQEVAAMSQTNIFRPGIDVTEAVLLPQTTWRRQEKTEMVGSWKAKVYDMHN
VVVSIKSRMVPGAMTDDEFFNSCNENEAESEEFDDILTEEERRQLEVALKSDSSDLSNEN
GDGIIPHRHSCYEQRDIPIEELNGCRNDDNKQEKKRWFNSWRKRDIKPEGEKRVVPPRSS
ICVEEKVGNYLEGSSPLNETRPGRHSVDVRVTRDELRQGRDAKASTSSNAENGNRRKDGS
RENEYKKGLRPVLWLSPDFPLRTEELLPLLDILANKVKAIRRLREILTTKLPKGTFPVKV
AIPVVPTIRVLVTFTKFEELQPLDEFATPPSSPTASGRESPSGAQPSSSSWFQWIKAPYQ
RPGSSTGSPSNRIENIQDPFVVPQDYTWISAEAKRKKMQEKDKAKKGKSRKQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400076190
Transcript Infomation

pacid=37455787 locus=PGSC0003DMG400029625 ID=PGSC0003DMT400076190.v4.03 annot-version=v4.03
Sequence

ATGGCTGGTATTGATGTTTCGAAATATGCACATAGCCCTGTGCATAAAGGTATAGTCTTG
AAAGATTATCCTTCTTTGAGGAAGATAATTGCTGCGTTGCCTCGGCTTTGTGATCCTGCT
GAGATTCATACTGAAGCAGTATCGCTGGCTGAGGAAGCTAAGGCTGATGCTATTTCTGCA
GTGATTGATCAACGGGATGTCCCTAACCGGGATAGTCCTCTTCATTTGGCTGTCAAACTT
GGTGATGAGACTGCAACCGAGATGCTTATGCTTGCTGGTGCTGATTGGAGCTTGCAGAAT
GAACATGGATGGAGTGCCTTGCAGGAGGCAATATGTAATAGGGAAGAAAGGATTGCGAAG
ATCATAGTTAGGCACTACCAGCCTTTGGCTTGGGCAAAATGGTGTAGAAGGTTGCCCCGG
TTGATTGGGACGATGAAGAGGATGAGGGATTTTTATATGGAAATAACATTTCACTTTGAG
AGCTCTGTTATACCTTTCATTTCTAGGATTGCCCCTTCAGATACATATAAGATTTGGAAG
AGGGGTGCAAATTTAAGGGCTGATATGACACTGGCTGGCTTTGATGGCTTCCGAATTCAG
CGATCAGATCAGAGCATTCTTTTCCTTGGAGATGGTTCTGAGGATGGTAAAGTTGCTCCT
GGATCACTTTGCATGATCTCACATAAAGAGAAGGAAATTATGAATGCTTTAGACGGTGCT
GGTGCTCCAGCGACTGACGCAGAAGTACAGCAAGAAGTTGCTGCAATGTCTCAAACTAAC
ATATTCAGGCCTGGGATTGATGTCACTGAGGCAGTTCTGTTGCCACAAACGACATGGAGG
CGCCAGGAGAAAACTGAGATGGTAGGTTCTTGGAAAGCTAAAGTATATGATATGCATAAT
GTGGTTGTGAGCATAAAATCAAGGATGGTTCCTGGAGCTATGACGGATGATGAATTTTTC
AATTCTTGCAATGAAAATGAAGCAGAGAGTGAAGAGTTTGATGATATCCTGACAGAGGAA
GAAAGAAGGCAGCTTGAGGTTGCTCTCAAGTCAGACTCTTCAGATTTAAGCAATGAGAAT
GGAGATGGGATCATTCCACATCGCCATAGTTGTTATGAACAAAGAGATATTCCCATTGAG
GAGTTAAATGGTTGCAGAAATGACGATAATAAGCAGGAAAAGAAGAGGTGGTTTAACAGC
TGGAGGAAACGGGATATTAAACCAGAAGGGGAGAAACGAGTTGTCCCACCAAGAAGTTCC
ATATGTGTTGAGGAGAAGGTTGGCAATTATCTTGAGGGTTCTTCGCCTTTAAATGAAACT
AGGCCAGGGAGGCATTCTGTGGATGTCAGGGTGACGAGGGACGAGCTTAGACAAGGAAGG
GATGCAAAGGCTTCTACATCTAGCAATGCTGAAAATGGAAATCGGCGTAAAGATGGAAGC
CGAGAAAATGAGTATAAGAAAGGACTGAGGCCTGTTCTTTGGCTTTCTCCAGATTTCCCG
TTGAGAACCGAAGAGCTCCTTCCTTTGCTTGACATTCTAGCTAACAAAGTTAAAGCTATC
CGGCGGTTGAGGGAAATTCTCACAACAAAACTTCCAAAAGGAACCTTCCCAGTAAAGGTA
GCAATTCCAGTTGTTCCAACGATTAGAGTATTGGTGACATTCACTAAATTTGAAGAATTG
CAGCCACTAGATGAGTTTGCAACTCCTCCTTCCAGCCCTACTGCTTCGGGCAGGGAGAGT
CCATCAGGGGCACAGCCTTCAAGTTCATCATGGTTTCAGTGGATAAAAGCCCCATATCAA
CGTCCTGGTTCTTCTACAGGCAGTCCAAGTAATAGGATCGAAAACATTCAAGATCCCTTT
GTAGTCCCTCAAGATTACACATGGATATCAGCAGAAGCAAAGAGAAAGAAAATGCAAGAA
AAGGATAAGGCAAAGAAAGGAAAGAGTAGGAAACAGTAG