Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076173
CDS Infomation

pacid=37458781 polypeptide=PGSC0003DMP400051584 locus=PGSC0003DMG400029617 ID=PGSC0003DMT400076173.v4.03 annot-version=v4.03
Sequence

ATGACTAGTGAGTCTTGTGGAATTTCTGGCCAAAATGTTGGCAATGATGTTCCGCTTACT
GAAAATCATGATGATAGGTATAGACATGTATCCATGCAGACAGGCGAAGAGTTTTCAGAA
GAGTTTCTTATGAAAAGTTTGACACCAAGAAAAGCAAACATAACAAGAGATACAGACCAA
AATCAGCCAGTTATAGGTATTTCAAATCCCGCTCAAAATTGCCACGTTGTCTCTAAGGAG
CTTCATGACCTCCTTGGGATAAAAAGAAGTGATTCAGACTGTGGTGCTGAGTTTTCGGAT
TATTCTCCTAGGATAGCATATGCACCGGAAGGTGACAAGAAGACTTATTTTGACACAGCA
AGCAGATGTAACAGGGAATGTAGTGTCAGTGGACAACAACCATCAAGATTCTTCGATGAG
AGGAATAGAGATATAGTAGCTCCTTGCACAACTGGTCGAGACATTTATGCATCAGAGTCC
CCTCATTCACATCAAATCCGCAACCCTGAGGCAGGAGTTTCTGAGAGTTGTGGGGGTGGA
AAGATAAGATTACTCTGCAGCTATGGGGGTAGAATCTTACCAAGGCCGAATGATGGGAAG
CTTAGATATGTAGGTGGGGAGACGAGAATTATATCAATTAGGAAGGACCTAGCTTTCAAC
GAGCTTGTAAAAAAGACAATAGCAATTTGTAATCAACCTCATACAATTAAGTATCAGCTT
CCTGAAGAAGATCTTGATGCACTTGTATCCGTTTCATCCGATGAGGATCTTCAGCACATG
ATTGAGGAGTATCATGACTTGGGAAAAAGTTCTCAAAGGCTACGGTTGTTTCTTGTGCCT
TGTGCTGATTCTGAGGTCCCTTGTTCCTTTGAAGGAATGACATTACAGCAAAGTGAAGCT
GACTATCAGTATGTTGTTGCAGTAAACGGAATGCTTGAGCCAGGTCATCGTAGAAGCTCT
AGCAGGGAGACCTTTGCAAACCAAGCAAGTCAATTTGGAAACACTTTGGACTTTAGTCCT
ATGTGCCAAAGAGATTCCCCAACTTATCTCCCATTTGAGAACCATAATGGAGGTAATTCA
ATGAATGTGAAGTTTCTGCTCCGAAATCCCAGTTCTTCTTATGTTAACATATCTCAGGTC
CCCTCTACTTCATATGTTCAATCATCTCCTTTATCTCCAGCAACATTTCAGATCACTGAT
CCTAACCGTTCCCATGTCCTTTTAAATGATAATGTTGCAAGTATTGACTTTCCTGATGCC
GGTAGTCCATATGTAGTAGAGGAACCACTATATGAAAATTCCTATCATGTTGATACCACA
GGCTACTATTATAATTGTCCCCTTGAGACCACTCCAAGGACAAATTACCCTAGTAAACAG
TCTGTGTCTTCTGCGCAGTTTGGTCAAACAGAGTTGGATTCTAGGAGGCTAATGTCAAAC
AAAAGGGAAATGCATATAGAAAAGCTAAACTATTCTCAAGATATAAGAATGTCTCCTGGA
TCTGATATTCAATCTACATCTAGTTACAGCATGCACCAAGATGCCACTGATCAATCACAA
TTGGTAGAGAGGCCCAATTTATCCAGAGAAGATTCAATAAGCTCACCCCCTTCAGATTTT
CTACGAGAAAAATCTCCATCACTTGCAATGTCTTGTTCATCACAAGAATGGTCAACGAAA
GAGCATGAGGTGAGAGATGAAAATCACCTAATTGCCAAGAAGGAGAATCATCCAAATATA
GAAGCCAGAGAACGCAACCAAGAGTATGCTGAATGGAGTCAAAGTACAACAAATTGGATA
AAGAAGACATGTCCTCCTTTCAACAAGTGCAGTAGAAGCTCTGAGGTTAATGCAAGCAAT
ATCCCAACTGTTAATGGCCTGGAACATGAGTTGAAATTGCCAAAAATTCTATGCTACTCG
GAGCCGGAACTTAGGGTCTACACATCATCATCAGATCCCAAAATCCAAGTGGAAAGACAC
ACTTCTTCACCACCTATCCCTCAAAAAAATTCAATAGTCACTTCCAAACAGCACCACATA
GATGATGATATAATTCACATAACAGCACCTTATACTCAAGCCTGTGGAGGCACAAAAACT
GCTGTACCATCTATTTCTCATGAATATTCAACAAATATTACTGGAGGGAGATATGTTAAT
TACAACTTAAGTCCTTCAACACCTGGTTGTCTCGTCAAGGACCAAAAGGAATCCAAACAT
GACCATCATGTTGTCGCTACAACAATGAACAATACAACGGAATCCTGCATATATTATGAG
CTGCAGCCTTCTATAATAAAGGATAGTAATGACCTCCAAAACATACAATCTGTGCCATTT
CCATCTGAGGAGTCTATTTTTTATTTGGATTGGAGAAATCCTCTGACTGGTGATCAATCA
ATTCCAAATTCAGCTGCAGATGTGGCTTACACTCATGAGGTCTCTTTCCATCAGAAACTT
GTGGATGGTCCTCATAAGTCTGCAGAAAAGGAAAATGCTGTTAGAGTTGCTTATGAAAAG
GCAGCATCTGGGAATGTTTCGTTTCTCCATTTGCAGCAGTCAGATGATTCATATGACAGA
AAATTACGAGAAATTGCTGTTATTGTGGAAGATGTAACCGATAGTGTGCCTCCTGATATA
CCCTTATCTTCAACAATAGTTCCACATGTGCAAGATGAACCTAGTGATGGGCTTCCATCT
GCTGAAGAAGAAACCAACGTCGAGAATGTTCTTGAAGAATCTGATCATGAGGATGGCAGA
AATGGTTCTAATGGAAAGGAAGAATCTGTCTCTGATTCTGCGATCATTGAAAAGGAGGCT
GGGATCTATGGCTTACAGATCATAAAAAACAGTGATCTTGAAGAGCTACAAGAATTGGGA
TCTGGAACATATGGAACAGTTTATTATGGGAAGTGGAGGGGAACAGATGTTGCTATCAAG
AGAATAAAACAAAGTTGTTTTGCTGGGAGTTCATCTGAGCAAGAACGTCTGATCAAAGAA
TTCTGGAGAGAGGCTAAGATTCTCTCTAAACTACACCATCCAAATATAGTGGCACTCTAT
GGGGTGGTTCCAAATGGACCTGGTGGAACAGTGGCTACAGTAACTGAATATATGGTCAGT
GGGTCTCTAAGGAATGTCCTGGCTAGGAAGGACCGTTCTTGCAGAGCGCTTGATCGGCGA
AAAAAACTTATGCTTGCATTAGATGCTGCTTTTGGCATGGAGTACCTGCATTTGAAAAAT
ATTGTTCATTTCGATTTGAAATGTGAAAACTTGCTGGTCAACTTGGGAGATCCACATCGT
CCTGTGTGCAAGGTTGGTGATTTTGGGTTATCACGGATTAAGAGAAATACCCTTGTTTCG
GGTGGTGTTAGAGGAACACTTCCATGGATGGCGCCGGAGCTATTGAATGGAAACAGCAGT
CGGGTTTCAGAAAAGGTTGATGTGTTTTCGTTTGGCATCACAATGTGGGAGATCTTGACA
GGAGAGGAGCCTTATGCAAACCTGCACTGTGGTGCTATTATTGGTGGAATTGTAAATAAC
ACACTCAGACCTCCCGTCCCACAACGTTGTGATCCTGAATGGGGAAAACTGATGGAAGAG
TGCTGGTCGCCTGATTCAGAAGCAAGACCATCATTTACAGAGATAACAAACAGACTTCGC
GCTATGTCACAAGCGCTCCAGCCAAAGACTCGAGTAAGGACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400051584
PEP Infomation

pacid=37458781 transcript=PGSC0003DMT400076173 locus=PGSC0003DMG400029617 ID=PGSC0003DMT400076173.v4.03 annot-version=v4.03
Sequence

MTSESCGISGQNVGNDVPLTENHDDRYRHVSMQTGEEFSEEFLMKSLTPRKANITRDTDQ
NQPVIGISNPAQNCHVVSKELHDLLGIKRSDSDCGAEFSDYSPRIAYAPEGDKKTYFDTA
SRCNRECSVSGQQPSRFFDERNRDIVAPCTTGRDIYASESPHSHQIRNPEAGVSESCGGG
KIRLLCSYGGRILPRPNDGKLRYVGGETRIISIRKDLAFNELVKKTIAICNQPHTIKYQL
PEEDLDALVSVSSDEDLQHMIEEYHDLGKSSQRLRLFLVPCADSEVPCSFEGMTLQQSEA
DYQYVVAVNGMLEPGHRRSSSRETFANQASQFGNTLDFSPMCQRDSPTYLPFENHNGGNS
MNVKFLLRNPSSSYVNISQVPSTSYVQSSPLSPATFQITDPNRSHVLLNDNVASIDFPDA
GSPYVVEEPLYENSYHVDTTGYYYNCPLETTPRTNYPSKQSVSSAQFGQTELDSRRLMSN
KREMHIEKLNYSQDIRMSPGSDIQSTSSYSMHQDATDQSQLVERPNLSREDSISSPPSDF
LREKSPSLAMSCSSQEWSTKEHEVRDENHLIAKKENHPNIEARERNQEYAEWSQSTTNWI
KKTCPPFNKCSRSSEVNASNIPTVNGLEHELKLPKILCYSEPELRVYTSSSDPKIQVERH
TSSPPIPQKNSIVTSKQHHIDDDIIHITAPYTQACGGTKTAVPSISHEYSTNITGGRYVN
YNLSPSTPGCLVKDQKESKHDHHVVATTMNNTTESCIYYELQPSIIKDSNDLQNIQSVPF
PSEESIFYLDWRNPLTGDQSIPNSAADVAYTHEVSFHQKLVDGPHKSAEKENAVRVAYEK
AASGNVSFLHLQQSDDSYDRKLREIAVIVEDVTDSVPPDIPLSSTIVPHVQDEPSDGLPS
AEEETNVENVLEESDHEDGRNGSNGKEESVSDSAIIEKEAGIYGLQIIKNSDLEELQELG
SGTYGTVYYGKWRGTDVAIKRIKQSCFAGSSSEQERLIKEFWREAKILSKLHHPNIVALY
GVVPNGPGGTVATVTEYMVSGSLRNVLARKDRSCRALDRRKKLMLALDAAFGMEYLHLKN
IVHFDLKCENLLVNLGDPHRPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSS
RVSEKVDVFSFGITMWEILTGEEPYANLHCGAIIGGIVNNTLRPPVPQRCDPEWGKLMEE
CWSPDSEARPSFTEITNRLRAMSQALQPKTRVRT*

Transcript Sequence

Transcript ID

PGSC0003DMT400076173
Transcript Infomation

pacid=37458781 locus=PGSC0003DMG400029617 ID=PGSC0003DMT400076173.v4.03 annot-version=v4.03
Sequence

ATGACTAGTGAGTCTTGTGGAATTTCTGGCCAAAATGTTGGCAATGATGTTCCGCTTACT
GAAAATCATGATGATAGGTATAGACATGTATCCATGCAGACAGGCGAAGAGTTTTCAGAA
GAGTTTCTTATGAAAAGTTTGACACCAAGAAAAGCAAACATAACAAGAGATACAGACCAA
AATCAGCCAGTTATAGGTATTTCAAATCCCGCTCAAAATTGCCACGTTGTCTCTAAGGAG
CTTCATGACCTCCTTGGGATAAAAAGAAGTGATTCAGACTGTGGTGCTGAGTTTTCGGAT
TATTCTCCTAGGATAGCATATGCACCGGAAGGTGACAAGAAGACTTATTTTGACACAGCA
AGCAGATGTAACAGGGAATGTAGTGTCAGTGGACAACAACCATCAAGATTCTTCGATGAG
AGGAATAGAGATATAGTAGCTCCTTGCACAACTGGTCGAGACATTTATGCATCAGAGTCC
CCTCATTCACATCAAATCCGCAACCCTGAGGCAGGAGTTTCTGAGAGTTGTGGGGGTGGA
AAGATAAGATTACTCTGCAGCTATGGGGGTAGAATCTTACCAAGGCCGAATGATGGGAAG
CTTAGATATGTAGGTGGGGAGACGAGAATTATATCAATTAGGAAGGACCTAGCTTTCAAC
GAGCTTGTAAAAAAGACAATAGCAATTTGTAATCAACCTCATACAATTAAGTATCAGCTT
CCTGAAGAAGATCTTGATGCACTTGTATCCGTTTCATCCGATGAGGATCTTCAGCACATG
ATTGAGGAGTATCATGACTTGGGAAAAAGTTCTCAAAGGCTACGGTTGTTTCTTGTGCCT
TGTGCTGATTCTGAGGTCCCTTGTTCCTTTGAAGGAATGACATTACAGCAAAGTGAAGCT
GACTATCAGTATGTTGTTGCAGTAAACGGAATGCTTGAGCCAGGTCATCGTAGAAGCTCT
AGCAGGGAGACCTTTGCAAACCAAGCAAGTCAATTTGGAAACACTTTGGACTTTAGTCCT
ATGTGCCAAAGAGATTCCCCAACTTATCTCCCATTTGAGAACCATAATGGAGGTAATTCA
ATGAATGTGAAGTTTCTGCTCCGAAATCCCAGTTCTTCTTATGTTAACATATCTCAGGTC
CCCTCTACTTCATATGTTCAATCATCTCCTTTATCTCCAGCAACATTTCAGATCACTGAT
CCTAACCGTTCCCATGTCCTTTTAAATGATAATGTTGCAAGTATTGACTTTCCTGATGCC
GGTAGTCCATATGTAGTAGAGGAACCACTATATGAAAATTCCTATCATGTTGATACCACA
GGCTACTATTATAATTGTCCCCTTGAGACCACTCCAAGGACAAATTACCCTAGTAAACAG
TCTGTGTCTTCTGCGCAGTTTGGTCAAACAGAGTTGGATTCTAGGAGGCTAATGTCAAAC
AAAAGGGAAATGCATATAGAAAAGCTAAACTATTCTCAAGATATAAGAATGTCTCCTGGA
TCTGATATTCAATCTACATCTAGTTACAGCATGCACCAAGATGCCACTGATCAATCACAA
TTGGTAGAGAGGCCCAATTTATCCAGAGAAGATTCAATAAGCTCACCCCCTTCAGATTTT
CTACGAGAAAAATCTCCATCACTTGCAATGTCTTGTTCATCACAAGAATGGTCAACGAAA
GAGCATGAGGTGAGAGATGAAAATCACCTAATTGCCAAGAAGGAGAATCATCCAAATATA
GAAGCCAGAGAACGCAACCAAGAGTATGCTGAATGGAGTCAAAGTACAACAAATTGGATA
AAGAAGACATGTCCTCCTTTCAACAAGTGCAGTAGAAGCTCTGAGGTTAATGCAAGCAAT
ATCCCAACTGTTAATGGCCTGGAACATGAGTTGAAATTGCCAAAAATTCTATGCTACTCG
GAGCCGGAACTTAGGGTCTACACATCATCATCAGATCCCAAAATCCAAGTGGAAAGACAC
ACTTCTTCACCACCTATCCCTCAAAAAAATTCAATAGTCACTTCCAAACAGCACCACATA
GATGATGATATAATTCACATAACAGCACCTTATACTCAAGCCTGTGGAGGCACAAAAACT
GCTGTACCATCTATTTCTCATGAATATTCAACAAATATTACTGGAGGGAGATATGTTAAT
TACAACTTAAGTCCTTCAACACCTGGTTGTCTCGTCAAGGACCAAAAGGAATCCAAACAT
GACCATCATGTTGTCGCTACAACAATGAACAATACAACGGAATCCTGCATATATTATGAG
CTGCAGCCTTCTATAATAAAGGATAGTAATGACCTCCAAAACATACAATCTGTGCCATTT
CCATCTGAGGAGTCTATTTTTTATTTGGATTGGAGAAATCCTCTGACTGGTGATCAATCA
ATTCCAAATTCAGCTGCAGATGTGGCTTACACTCATGAGGTCTCTTTCCATCAGAAACTT
GTGGATGGTCCTCATAAGTCTGCAGAAAAGGAAAATGCTGTTAGAGTTGCTTATGAAAAG
GCAGCATCTGGGAATGTTTCGTTTCTCCATTTGCAGCAGTCAGATGATTCATATGACAGA
AAATTACGAGAAATTGCTGTTATTGTGGAAGATGTAACCGATAGTGTGCCTCCTGATATA
CCCTTATCTTCAACAATAGTTCCACATGTGCAAGATGAACCTAGTGATGGGCTTCCATCT
GCTGAAGAAGAAACCAACGTCGAGAATGTTCTTGAAGAATCTGATCATGAGGATGGCAGA
AATGGTTCTAATGGAAAGGAAGAATCTGTCTCTGATTCTGCGATCATTGAAAAGGAGGCT
GGGATCTATGGCTTACAGATCATAAAAAACAGTGATCTTGAAGAGCTACAAGAATTGGGA
TCTGGAACATATGGAACAGTTTATTATGGGAAGTGGAGGGGAACAGATGTTGCTATCAAG
AGAATAAAACAAAGTTGTTTTGCTGGGAGTTCATCTGAGCAAGAACGTCTGATCAAAGAA
TTCTGGAGAGAGGCTAAGATTCTCTCTAAACTACACCATCCAAATATAGTGGCACTCTAT
GGGGTGGTTCCAAATGGACCTGGTGGAACAGTGGCTACAGTAACTGAATATATGGTCAGT
GGGTCTCTAAGGAATGTCCTGGCTAGGAAGGACCGTTCTTGCAGAGCGCTTGATCGGCGA
AAAAAACTTATGCTTGCATTAGATGCTGCTTTTGGCATGGAGTACCTGCATTTGAAAAAT
ATTGTTCATTTCGATTTGAAATGTGAAAACTTGCTGGTCAACTTGGGAGATCCACATCGT
CCTGTGTGCAAGGTTGGTGATTTTGGGTTATCACGGATTAAGAGAAATACCCTTGTTTCG
GGTGGTGTTAGAGGAACACTTCCATGGATGGCGCCGGAGCTATTGAATGGAAACAGCAGT
CGGGTTTCAGAAAAGGTTGATGTGTTTTCGTTTGGCATCACAATGTGGGAGATCTTGACA
GGAGAGGAGCCTTATGCAAACCTGCACTGTGGTGCTATTATTGGTGGAATTGTAAATAAC
ACACTCAGACCTCCCGTCCCACAACGTTGTGATCCTGAATGGGGAAAACTGATGGAAGAG
TGCTGGTCGCCTGATTCAGAAGCAAGACCATCATTTACAGAGATAACAAACAGACTTCGC
GCTATGTCACAAGCGCTCCAGCCAAAGACTCGAGTAAGGACATGA