Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076051
CDS Infomation

pacid=37468486 polypeptide=PGSC0003DMP400051500 locus=PGSC0003DMG400029573 ID=PGSC0003DMT400076051.v4.03 annot-version=v4.03
Sequence

ATGAAGCTCTCGTTTTCTCTCTCTTCAAAGCCATCTTCAAACCTGAAGAAGCATCCGTCT
TCTCAGACCTTCACCGGCGACGATCCCCGCAACTCCTCAAACCCCGTCGAAAAAGAGTAC
GTCACGGAATTCGACCCTTCCAAAGCTGCAGCTAGTTCCACCAAAGACACACTCATAATA
CCTCCAAAGCAGAACGAATGGCGCCCTATCAAACGGATGAAAAATCTCGAAGTCCCTCTC
CAAGCGGATGCTTCTGCTGCCGATCAACCACTTCAATTCGAACTTGACTCTGGCGCTGGT
GTCGAACCGGCGTCAGATGGAATCTCTTACGGCCTCAATGTCCGCCAATCAGAAAACCCT
AATCCTGATCCTAACCCTAACCCTAACACGAACTCAAACCCTAAACAGATGATTGATCCG
ATGTTGCATAAGTTTAAGGAAGATTTGAAGAGGTTGCCAGAGCATAACGGGATTGATGAA
TATACTGATATGCCAGTGGAGGGATTTGGGGCTGCTTTGTTGAAGGGTTATGGGTGGGTT
GAAGGTAGAGGGATTGGTCGGAACGCGAAAGAGGATGTTAAAGTTGTTGAGTATAAAAAG
TGGACAGCTAAAGAAGGGATTGGATTCATACCTGAAGTACCAAAACCTAGCAGTAAGGGT
GAAGGGGCTGTTAAATCGATTAAAAAGAGTGAAGATGGTGTTAAAGTAGATCATAGTGAT
GGTAATATTGAGAAGATAGATAGAGAAAAAGCAGGGAATGGATTATATGTAGGGAAGAAA
GTGAGGGTAGTGAGAGGAAAGGAAATGGGAATGAAAGGAGAAATTTTGGAGGTGAATAGC
AGTGGAGATTTGGTGATCTTAAAGCTTGCGGACAAAGAGGTGAAGCTTCAAGCACGAGAC
TTGGCCGAATTGGGTTCAGTGGAGGAGGAGAGGTGTTTGAAGAAGTTGTTAGAATTGAAG
ATTAGAGAAGAAAAGAGTAATCTTGATGGGGTTAGGAAACAGTCATCTGGAGGTAGAAGT
AGAGATGAAGCAACAACGGAGAGTAAAAAGGAAAGCAGAAGAAGTAGAGATGAAAGGAGT
GATAAAGTATCTTGGCTTGCTAGTCACATCAGAGTTAGGATTATAAGTAAGGATTTGAAA
AAGGGAAGATTGTATCTAAAGAAAGGAGAAATTATGGATGTGGTTGGACCGACAAGTTGT
GATATATGTATGGATGAAACTAGGGAGTTGATACAAGGTGTGGATCAGGAATTGCTTGAG
ACGGCTCTTCCTAAGCGTGGTGGTCCAGTTCTTGTTCTGTATGGTAGGAACAAAGGTGTG
TATGGCCACTTGGTTGAGAAGGATAGTGAGAAGGAGACTGGAATTATCCGAGATGGTGAT
ACAAAGGAGTTACTCAAAGTGCGACTTGAACAAATTGCTGAGTATCTTGGAGATCCAAGC
TATATTGGTTATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400051500
PEP Infomation

pacid=37468486 transcript=PGSC0003DMT400076051 locus=PGSC0003DMG400029573 ID=PGSC0003DMT400076051.v4.03 annot-version=v4.03
Sequence

MKLSFSLSSKPSSNLKKHPSSQTFTGDDPRNSSNPVEKEYVTEFDPSKAAASSTKDTLII
PPKQNEWRPIKRMKNLEVPLQADASAADQPLQFELDSGAGVEPASDGISYGLNVRQSENP
NPDPNPNPNTNSNPKQMIDPMLHKFKEDLKRLPEHNGIDEYTDMPVEGFGAALLKGYGWV
EGRGIGRNAKEDVKVVEYKKWTAKEGIGFIPEVPKPSSKGEGAVKSIKKSEDGVKVDHSD
GNIEKIDREKAGNGLYVGKKVRVVRGKEMGMKGEILEVNSSGDLVILKLADKEVKLQARD
LAELGSVEEERCLKKLLELKIREEKSNLDGVRKQSSGGRSRDEATTESKKESRRSRDERS
DKVSWLASHIRVRIISKDLKKGRLYLKKGEIMDVVGPTSCDICMDETRELIQGVDQELLE
TALPKRGGPVLVLYGRNKGVYGHLVEKDSEKETGIIRDGDTKELLKVRLEQIAEYLGDPS
YIGY*

Transcript Sequence

Transcript ID

PGSC0003DMT400076051
Transcript Infomation

pacid=37468486 locus=PGSC0003DMG400029573 ID=PGSC0003DMT400076051.v4.03 annot-version=v4.03
Sequence

ATGAAGCTCTCGTTTTCTCTCTCTTCAAAGCCATCTTCAAACCTGAAGAAGCATCCGTCT
TCTCAGACCTTCACCGGCGACGATCCCCGCAACTCCTCAAACCCCGTCGAAAAAGAGTAC
GTCACGGAATTCGACCCTTCCAAAGCTGCAGCTAGTTCCACCAAAGACACACTCATAATA
CCTCCAAAGCAGAACGAATGGCGCCCTATCAAACGGATGAAAAATCTCGAAGTCCCTCTC
CAAGCGGATGCTTCTGCTGCCGATCAACCACTTCAATTCGAACTTGACTCTGGCGCTGGT
GTCGAACCGGCGTCAGATGGAATCTCTTACGGCCTCAATGTCCGCCAATCAGAAAACCCT
AATCCTGATCCTAACCCTAACCCTAACACGAACTCAAACCCTAAACAGATGATTGATCCG
ATGTTGCATAAGTTTAAGGAAGATTTGAAGAGGTTGCCAGAGCATAACGGGATTGATGAA
TATACTGATATGCCAGTGGAGGGATTTGGGGCTGCTTTGTTGAAGGGTTATGGGTGGGTT
GAAGGTAGAGGGATTGGTCGGAACGCGAAAGAGGATGTTAAAGTTGTTGAGTATAAAAAG
TGGACAGCTAAAGAAGGGATTGGATTCATACCTGAAGTACCAAAACCTAGCAGTAAGGGT
GAAGGGGCTGTTAAATCGATTAAAAAGAGTGAAGATGGTGTTAAAGTAGATCATAGTGAT
GGTAATATTGAGAAGATAGATAGAGAAAAAGCAGGGAATGGATTATATGTAGGGAAGAAA
GTGAGGGTAGTGAGAGGAAAGGAAATGGGAATGAAAGGAGAAATTTTGGAGGTGAATAGC
AGTGGAGATTTGGTGATCTTAAAGCTTGCGGACAAAGAGGTGAAGCTTCAAGCACGAGAC
TTGGCCGAATTGGGTTCAGTGGAGGAGGAGAGGTGTTTGAAGAAGTTGTTAGAATTGAAG
ATTAGAGAAGAAAAGAGTAATCTTGATGGGGTTAGGAAACAGTCATCTGGAGGTAGAAGT
AGAGATGAAGCAACAACGGAGAGTAAAAAGGAAAGCAGAAGAAGTAGAGATGAAAGGAGT
GATAAAGTATCTTGGCTTGCTAGTCACATCAGAGTTAGGATTATAAGTAAGGATTTGAAA
AAGGGAAGATTGTATCTAAAGAAAGGAGAAATTATGGATGTGGTTGGACCGACAAGTTGT
GATATATGTATGGATGAAACTAGGGAGTTGATACAAGGTGTGGATCAGGAATTGCTTGAG
ACGGCTCTTCCTAAGCGTGGTGGTCCAGTTCTTGTTCTGTATGGTAGGAACAAAGGTGTG
TATGGCCACTTGGTTGAGAAGGATAGTGAGAAGGAGACTGGAATTATCCGAGATGGTGAT
ACAAAGGAGTTACTCAAAGTGCGACTTGAACAAATTGCTGAGTATCTTGGAGATCCAAGC
TATATTGGTTATTGA