Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400076023
CDS Infomation

pacid=37470056 polypeptide=PGSC0003DMP400051479 locus=PGSC0003DMG400029562 ID=PGSC0003DMT400076023.v4.03 annot-version=v4.03
Sequence

ATGGAGATTCAACTTTCTCTATTCAACTTATTTCCTTTGTTTCTCTTCTTTTCATTTCTT
TTTATCCTATTGAAGAAATGGAACACAAAACTCACAAAGTTACCTCCAGGTCCATGGAGA
CTTCCTCTTATTGGAAGCCTCCATCACTTGAAGGGGAAACTACCACATCACAATCTTCGA
GATTTAGCTCGAAAACATGGACCTCTCATGTACTTACAACTCGGAGAAGTTCCTGTAGTT
GTCATATCATCACCTCGTATAGCAAAAGCTGTACTAAAAACTCATGACCTCGCTTTTGCA
ACTAGGCCACAGTTCATGGCCTCAGACATTGTGTTTTACAAAAGTAGGGACATATCTTTC
GCCCCATATGGTGATTACTGGAGGCAAATGCGTAAAGTGTTGACACAAGAACTACTTAGT
AACAAGATGCTCAAGTCATATAACATGATCCGAAAAGATGAGCTGTCAAAGCTCCTCTCA
TCGATTCGTTTGTCAACAGGTTCTGCAGTAAACATAACAGAAAAGCTTCTCTGGTTTACC
AGCTGCATGACCTGTAGATTAGCATTTGGAAAAATATGCAACGATCGAGATGAACTGATC
ATGTTAATAAGGGAGATATTAGCATTATCAGGAGGATTTGATGTGTGTGATTTGTTCCCT
TCCTGGAAATTACTTCACAATATGAGTAACATGAAAGCTAGATTAACAAATGTACATCAT
AAGTATGATCAAATCATGGAGAATATCATCAATGAACACAAAGAGAATCATGCAGCAGGG
ATAAAGGGAAATAACGAGTTTGGTGGCGAAGATATGATTGATGCTTTACTGAGAGTAAAG
GAGAACAATGAACTTCAATTTCCCATTGAAAATGACAACATGAAAGCAGTAATTCTGGAC
TTGTTTATTGCTGGAACGGAAACTTCATATACTGCAATTATATGGGCATTATCAGAGATG
ATGAAGCACCAAAATGTTATGGCCAAGGCACAAGCTGAAGTGAGACAAGTCTTTAAAGAG
AAGGAAAATCTCGATGAAAATGATCTTGACAAGTTGCCATACTTAAAATCAGTGATTAAG
GAAACACTAAGGATGCATCCTCCAGTTCCTTTGTTAGGACCTAGGGAGTGCAGGGAGCAG
ACTGAGATTGATGGATATACTGTACCGCTTAACGCTAGAGTAATGGTCAATGCATGGGCG
ATTGGAAGAGATCCTGAAAGTTGGGAAGATCCTGAAAGTTTCAAACCGGAGAGATTTGAA
AATATTTCAGTTGATCTTACAGGTAATCACTATCAGTTTATTCCTTTTGGTTCAGGAAGA
AGAATGTGTCCAGGAATGTCGTTTGGTTTAGTTAACACTGGGCATCCTTTAGCCCAGTTT
CTATACCAATTCGACTGGAAACTCCCCGATAAGGTTAATGCAAATGATTTTAGTACTACT
GAAACAAGTAGAGTTTTTGCAGCAAGCAAAGATGACCTCTACTTGATTCCCGCAAATCCC
AGAGAGCAAGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400051479
PEP Infomation

pacid=37470056 transcript=PGSC0003DMT400076023 locus=PGSC0003DMG400029562 ID=PGSC0003DMT400076023.v4.03 annot-version=v4.03
Sequence

MEIQLSLFNLFPLFLFFSFLFILLKKWNTKLTKLPPGPWRLPLIGSLHHLKGKLPHHNLR
DLARKHGPLMYLQLGEVPVVVISSPRIAKAVLKTHDLAFATRPQFMASDIVFYKSRDISF
APYGDYWRQMRKVLTQELLSNKMLKSYNMIRKDELSKLLSSIRLSTGSAVNITEKLLWFT
SCMTCRLAFGKICNDRDELIMLIREILALSGGFDVCDLFPSWKLLHNMSNMKARLTNVHH
KYDQIMENIINEHKENHAAGIKGNNEFGGEDMIDALLRVKENNELQFPIENDNMKAVILD
LFIAGTETSYTAIIWALSEMMKHQNVMAKAQAEVRQVFKEKENLDENDLDKLPYLKSVIK
ETLRMHPPVPLLGPRECREQTEIDGYTVPLNARVMVNAWAIGRDPESWEDPESFKPERFE
NISVDLTGNHYQFIPFGSGRRMCPGMSFGLVNTGHPLAQFLYQFDWKLPDKVNANDFSTT
ETSRVFAASKDDLYLIPANPREQE*

Transcript Sequence

Transcript ID

PGSC0003DMT400076023
Transcript Infomation

pacid=37470056 locus=PGSC0003DMG400029562 ID=PGSC0003DMT400076023.v4.03 annot-version=v4.03
Sequence

ATGGAGATTCAACTTTCTCTATTCAACTTATTTCCTTTGTTTCTCTTCTTTTCATTTCTT
TTTATCCTATTGAAGAAATGGAACACAAAACTCACAAAGTTACCTCCAGGTCCATGGAGA
CTTCCTCTTATTGGAAGCCTCCATCACTTGAAGGGGAAACTACCACATCACAATCTTCGA
GATTTAGCTCGAAAACATGGACCTCTCATGTACTTACAACTCGGAGAAGTTCCTGTAGTT
GTCATATCATCACCTCGTATAGCAAAAGCTGTACTAAAAACTCATGACCTCGCTTTTGCA
ACTAGGCCACAGTTCATGGCCTCAGACATTGTGTTTTACAAAAGTAGGGACATATCTTTC
GCCCCATATGGTGATTACTGGAGGCAAATGCGTAAAGTGTTGACACAAGAACTACTTAGT
AACAAGATGCTCAAGTCATATAACATGATCCGAAAAGATGAGCTGTCAAAGCTCCTCTCA
TCGATTCGTTTGTCAACAGGTTCTGCAGTAAACATAACAGAAAAGCTTCTCTGGTTTACC
AGCTGCATGACCTGTAGATTAGCATTTGGAAAAATATGCAACGATCGAGATGAACTGATC
ATGTTAATAAGGGAGATATTAGCATTATCAGGAGGATTTGATGTGTGTGATTTGTTCCCT
TCCTGGAAATTACTTCACAATATGAGTAACATGAAAGCTAGATTAACAAATGTACATCAT
AAGTATGATCAAATCATGGAGAATATCATCAATGAACACAAAGAGAATCATGCAGCAGGG
ATAAAGGGAAATAACGAGTTTGGTGGCGAAGATATGATTGATGCTTTACTGAGAGTAAAG
GAGAACAATGAACTTCAATTTCCCATTGAAAATGACAACATGAAAGCAGTAATTCTGGAC
TTGTTTATTGCTGGAACGGAAACTTCATATACTGCAATTATATGGGCATTATCAGAGATG
ATGAAGCACCAAAATGTTATGGCCAAGGCACAAGCTGAAGTGAGACAAGTCTTTAAAGAG
AAGGAAAATCTCGATGAAAATGATCTTGACAAGTTGCCATACTTAAAATCAGTGATTAAG
GAAACACTAAGGATGCATCCTCCAGTTCCTTTGTTAGGACCTAGGGAGTGCAGGGAGCAG
ACTGAGATTGATGGATATACTGTACCGCTTAACGCTAGAGTAATGGTCAATGCATGGGCG
ATTGGAAGAGATCCTGAAAGTTGGGAAGATCCTGAAAGTTTCAAACCGGAGAGATTTGAA
AATATTTCAGTTGATCTTACAGGTAATCACTATCAGTTTATTCCTTTTGGTTCAGGAAGA
AGAATGTGTCCAGGAATGTCGTTTGGTTTAGTTAACACTGGGCATCCTTTAGCCCAGTTT
CTATACCAATTCGACTGGAAACTCCCCGATAAGGTTAATGCAAATGATTTTAGTACTACT
GAAACAAGTAGAGTTTTTGCAGCAAGCAAAGATGACCTCTACTTGATTCCCGCAAATCCC
AGAGAGCAAGAATAG