Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075973
CDS Infomation

pacid=37469329 polypeptide=PGSC0003DMP400051447 locus=PGSC0003DMG400029550 ID=PGSC0003DMT400075973.v4.03 annot-version=v4.03
Sequence

ATGTCGTCCGAACCAGCTCCTTATGTACCCAAAAATGTCCTCATAACGGGTGCAGCAGGC
TTCATTCCCTCTCATGTAACCAATAGATTGACCAAACTATATCCTAACTACAGGATTGTT
GCTCTTGACAAGCTCGATTATTGTTCGAGTCTAAAGAATTTGGAGCCAAGTTACTCATGT
CCGAATTTCAAATTTGTCAAGGCTGATATAACGAGTGCTGATCTTATCAACCATCTTTTG
GTTGAGGAGAAGATTGACACAATTATGCATTTTGCAGCACAGACTCATGTGGATAATTCA
TTTGGAAATTCATTCGAGTTCACCATCAATAATATTTATGGTACTCATGTGCTTCTCGAG
GCTTGTAAGTTGACGAAATCCATCAAAAGATTCATTCATGTTAGTACGGATGAAGTTTAT
GGCGAAACTGATTTGGAGACTGACATTGGCAATCCTGAAGCTTCTCAACTCCTTCCTACT
AATCCATATTCCGCGACTAAAGCTGGAGCTGAAATGCTTGTCATGGCTTATAATAGGTCT
TATGGCCTACCAACAATCACTACTCGAGGGAATAACGTGTATGGCCCAAATCAGTTCCCT
GAGAAGTTGATTCCAAAGTTCATTATTCTTGCAATGAAGGGTGAGCGTTTGCCAATTCAT
GGCGATGGAACAAATGTTAGGAGCTATTTGTACTCTGCTGATGTTGCTGAGGCATTTGAT
GTGATACTGCATAAAGGGGTAATTGGACATGTGTATAACATTGGCACTAAGAAGGAGAGG
GCAGTTTTGGACGTGGCTGCAGACATATGCAAATTATTCGGAAAGAATGCTCAAGAAGTT
ATCGAGCTTGTCCAAGATAGGCCTTTTAATGACCAAAGGTATTTCCTGGATGATCAAAAG
CTTAAGAAGTTAGGGTGGCAAGAAAGGACTACTTGGGAGGCAGGACTAAAGATGACACTC
GATTGGTACACCAAAAATCCCGATTGGTGGGGTGATATAACCGGAGCCCTTCACCCACAT
CCGAGAATTTCAAACATTGTGCCTTCACATGATGAAGGGTGTCTGTTGCAGCTTGTAAAA
AGAAGCAACAAAGGTTGTGGCTCAGACTTGAAGTTCTTGATTTACGGAAAAACTGGTTGG
ATTGGAGGGTTGTTAGGAAAGATTTGTGATGAACGTGGAATATCATACGAGTATGGATTA
GGACGACTACAGGATAGGAGTTCTCTAATGCAAGACATTATAAGAGTAAAGCCAACTCAT
GTTTTCAACGCGGCTGGTGTTACTGGGAGGCCTAATGTGGATTGGTGTGAATCACATAAA
GCAGAGACAATTAGAACGAACGTTGCTGGTACACTAACTTTAGCTGATATCTGCAGAGAA
GCAGATATCTTAGTGATGAATTTCGCGACAGGTTGCATATTTGAATATGATGAGAGGCAT
CCATTAGGCTCAGGCATCGGATTCAAAGAGGAAGACAAACCAAATTTTACAGGATCCTTT
TACTCGAAGACCAAAGCCATGGTTGAAGAGCTTCTAAAAGAATATGATAATGTATGCACT
CTCCGAGTAAGAATGCCAATATCATCAGACCTTAGTAACCCGAGAAACTTCATCACAAAG
ATAACGCGTTATGATAAAGTGGTAAACATCCCAAATAGCATGACAGTTCTAGATGAGCTA
CTACCAATCTCTATTGAAATGGCAAAGAGAAACTGTAGAGGGATATGGAACTTCACTAAT
CCGGGAGTTGTGAGCCACAACGAGATTCTAGGGATGTATAAAGACTACATCGATCCCAAA
TTCAAGTGGCAGAATTTCGATCTTCAAGAACAAGCCAAAGTGATCGTTGCACCACGAAGT
AACAACGAGCTTGACATGACAAAGCTGAAAAAAGAGTTTCCAGAATTGCTATCAATCAAA
GATTCAATCATCAAGTATGTCTTCGGACCTAACAAAAAGACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400051447
PEP Infomation

pacid=37469329 transcript=PGSC0003DMT400075973 locus=PGSC0003DMG400029550 ID=PGSC0003DMT400075973.v4.03 annot-version=v4.03
Sequence

MSSEPAPYVPKNVLITGAAGFIPSHVTNRLTKLYPNYRIVALDKLDYCSSLKNLEPSYSC
PNFKFVKADITSADLINHLLVEEKIDTIMHFAAQTHVDNSFGNSFEFTINNIYGTHVLLE
ACKLTKSIKRFIHVSTDEVYGETDLETDIGNPEASQLLPTNPYSATKAGAEMLVMAYNRS
YGLPTITTRGNNVYGPNQFPEKLIPKFIILAMKGERLPIHGDGTNVRSYLYSADVAEAFD
VILHKGVIGHVYNIGTKKERAVLDVAADICKLFGKNAQEVIELVQDRPFNDQRYFLDDQK
LKKLGWQERTTWEAGLKMTLDWYTKNPDWWGDITGALHPHPRISNIVPSHDEGCLLQLVK
RSNKGCGSDLKFLIYGKTGWIGGLLGKICDERGISYEYGLGRLQDRSSLMQDIIRVKPTH
VFNAAGVTGRPNVDWCESHKAETIRTNVAGTLTLADICREADILVMNFATGCIFEYDERH
PLGSGIGFKEEDKPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLSNPRNFITK
ITRYDKVVNIPNSMTVLDELLPISIEMAKRNCRGIWNFTNPGVVSHNEILGMYKDYIDPK
FKWQNFDLQEQAKVIVAPRSNNELDMTKLKKEFPELLSIKDSIIKYVFGPNKKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400075973
Transcript Infomation

pacid=37469329 locus=PGSC0003DMG400029550 ID=PGSC0003DMT400075973.v4.03 annot-version=v4.03
Sequence

ATGTCGTCCGAACCAGCTCCTTATGTACCCAAAAATGTCCTCATAACGGGTGCAGCAGGC
TTCATTCCCTCTCATGTAACCAATAGATTGACCAAACTATATCCTAACTACAGGATTGTT
GCTCTTGACAAGCTCGATTATTGTTCGAGTCTAAAGAATTTGGAGCCAAGTTACTCATGT
CCGAATTTCAAATTTGTCAAGGCTGATATAACGAGTGCTGATCTTATCAACCATCTTTTG
GTTGAGGAGAAGATTGACACAATTATGCATTTTGCAGCACAGACTCATGTGGATAATTCA
TTTGGAAATTCATTCGAGTTCACCATCAATAATATTTATGGTACTCATGTGCTTCTCGAG
GCTTGTAAGTTGACGAAATCCATCAAAAGATTCATTCATGTTAGTACGGATGAAGTTTAT
GGCGAAACTGATTTGGAGACTGACATTGGCAATCCTGAAGCTTCTCAACTCCTTCCTACT
AATCCATATTCCGCGACTAAAGCTGGAGCTGAAATGCTTGTCATGGCTTATAATAGGTCT
TATGGCCTACCAACAATCACTACTCGAGGGAATAACGTGTATGGCCCAAATCAGTTCCCT
GAGAAGTTGATTCCAAAGTTCATTATTCTTGCAATGAAGGGTGAGCGTTTGCCAATTCAT
GGCGATGGAACAAATGTTAGGAGCTATTTGTACTCTGCTGATGTTGCTGAGGCATTTGAT
GTGATACTGCATAAAGGGGTAATTGGACATGTGTATAACATTGGCACTAAGAAGGAGAGG
GCAGTTTTGGACGTGGCTGCAGACATATGCAAATTATTCGGAAAGAATGCTCAAGAAGTT
ATCGAGCTTGTCCAAGATAGGCCTTTTAATGACCAAAGGTATTTCCTGGATGATCAAAAG
CTTAAGAAGTTAGGGTGGCAAGAAAGGACTACTTGGGAGGCAGGACTAAAGATGACACTC
GATTGGTACACCAAAAATCCCGATTGGTGGGGTGATATAACCGGAGCCCTTCACCCACAT
CCGAGAATTTCAAACATTGTGCCTTCACATGATGAAGGGTGTCTGTTGCAGCTTGTAAAA
AGAAGCAACAAAGGTTGTGGCTCAGACTTGAAGTTCTTGATTTACGGAAAAACTGGTTGG
ATTGGAGGGTTGTTAGGAAAGATTTGTGATGAACGTGGAATATCATACGAGTATGGATTA
GGACGACTACAGGATAGGAGTTCTCTAATGCAAGACATTATAAGAGTAAAGCCAACTCAT
GTTTTCAACGCGGCTGGTGTTACTGGGAGGCCTAATGTGGATTGGTGTGAATCACATAAA
GCAGAGACAATTAGAACGAACGTTGCTGGTACACTAACTTTAGCTGATATCTGCAGAGAA
GCAGATATCTTAGTGATGAATTTCGCGACAGGTTGCATATTTGAATATGATGAGAGGCAT
CCATTAGGCTCAGGCATCGGATTCAAAGAGGAAGACAAACCAAATTTTACAGGATCCTTT
TACTCGAAGACCAAAGCCATGGTTGAAGAGCTTCTAAAAGAATATGATAATGTATGCACT
CTCCGAGTAAGAATGCCAATATCATCAGACCTTAGTAACCCGAGAAACTTCATCACAAAG
ATAACGCGTTATGATAAAGTGGTAAACATCCCAAATAGCATGACAGTTCTAGATGAGCTA
CTACCAATCTCTATTGAAATGGCAAAGAGAAACTGTAGAGGGATATGGAACTTCACTAAT
CCGGGAGTTGTGAGCCACAACGAGATTCTAGGGATGTATAAAGACTACATCGATCCCAAA
TTCAAGTGGCAGAATTTCGATCTTCAAGAACAAGCCAAAGTGATCGTTGCACCACGAAGT
AACAACGAGCTTGACATGACAAAGCTGAAAAAAGAGTTTCCAGAATTGCTATCAATCAAA
GATTCAATCATCAAGTATGTCTTCGGACCTAACAAAAAGACATAA