Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075959
CDS Infomation

pacid=37469436 polypeptide=PGSC0003DMP400051437 locus=PGSC0003DMG400029544 ID=PGSC0003DMT400075959.v4.03 annot-version=v4.03
Sequence

ATGGATGTATATTCTGGCAAAAGAGCTAAAAATGGGCTTGTCGCGCCCAGAAGAGGTTTA
AGGGATACTGCTGATAGCAGAGATGAAGATGTTCAGCTGTGCTCGCGGCTTGAATGCAGT
GGCCGGCTCAACCATTTGAAGAGCAGCTGTGTTGGAACTAAAGAGAAATCCAGATCATTT
AAACCTACTTTTAATGCTTCGAATGGGAAGGATGTGGTTGGGAGTTCATCTAGGACATCT
TCAGTGCTGAGTGTAAGAAACGCACGCGAGGAATCTCACATAAAATCTTTCTCTCAAGTT
GGAAATGATCAGTCAGTAATTAGCTCTTTGAATGGTGTGCCAGAAGTTACAGAACAAATT
CAGTCTTCGCCAGAGTATCAACTCAATATTAGTTCAGCAGCGAGAGACACTAGATCAAGC
AAAGCTAGATCAACAGAAGCAGGACACTCTAGTGGAACATCCAGTAGTAAACCTCGTAAA
ATAGTTTGTCACAAGTCTGGTTCTTACAATCAACATACTCCAATGCATGCCTCTGTTTCT
TCACAATCTAAAGCCATTGATTCTGGAAAGCGGCCCTGTAGCAGTGGGGCTGGATATGGG
TTGAGAAATCTAAAATGTAAGTCCATATCAGATGTCCTCCCAAATAATTGTTCAACGTCG
GAATCAAGATTTAGTAGTAGGGACATGGTAAAAAGGAGAAATACCGAAGGTGAAAGCAGT
TCATCTGCTAAAGGGAAGAAAAATACCAAGGCATCACAGAGAGAAAAGCATGTCACTCGT
CAAACTCGTGGAATCTCCATCTCTGAGTCAAGAAGTGGCAGAAATTTGGATTATAGTGTG
AATAATCATGCTTTGTCAGTTCAGACCCGCAGGTCGATGAATGTGAATTCTAGGTTTAGG
GGTCCAGTACAAGATTCATTGCAAACTGAGTCCTCTGGCTTAGTCCAAAGTTTACATCGG
CCTGAAACGCCAGATCTCAATCTGGAGTCTTCAAGCCAATTGTTCACAGATGGCTCTTCA
TCAAGTGATTTTAGTTCTTATAGTTTTCCTGGAAATGATATTGATGATTTACCCAGTGTA
GTGCCCTTCACTTCTGCCGAACTAGGCATTAACCGATTAATGAACCAGCAAGCCTTACAG
CGATATAACATGGATGGAGTTGCTCAGGTATTATTGGCACTTGAGAGAATGGAAGAAGAT
GAAGAGTTAACATATGAGCAGCTGCTTGCATTGGAGACGAACTTGCTGCTTAGCGGCCTT
AACTTCTATGACCAGCATAGGGACATGAGACTGGATATAGATAGCATGTCCTATGAGGAA
TTACTAGCTCTTGAAGAGAGGATGGGCACTGTCAGCACAGCTCTGCCGGAGGAGGCAGTA
TCAAAGTGTCTTCAAAGAAGCATTTATCAAGGCATGCACTCGGAACTAGGGGCATTTGGA
GGTGATGGGGATGAAGCTGAGATCAAATGCAGTATTTGTCAGGAGGATTATGTGATTGGG
GATGAAATCGGAAAGTTGGAATGCAAGCATGGTTATCACATGGAATGTGTACAACAATGG
TTAAAGCATAAGAATTGGTGCCCAATCTGCAAGACATCAGCAGCAGCTTCATCAAAGCTA
ACAACAGCACCATCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400051437
PEP Infomation

pacid=37469436 transcript=PGSC0003DMT400075959 locus=PGSC0003DMG400029544 ID=PGSC0003DMT400075959.v4.03 annot-version=v4.03
Sequence

MDVYSGKRAKNGLVAPRRGLRDTADSRDEDVQLCSRLECSGRLNHLKSSCVGTKEKSRSF
KPTFNASNGKDVVGSSSRTSSVLSVRNAREESHIKSFSQVGNDQSVISSLNGVPEVTEQI
QSSPEYQLNISSAARDTRSSKARSTEAGHSSGTSSSKPRKIVCHKSGSYNQHTPMHASVS
SQSKAIDSGKRPCSSGAGYGLRNLKCKSISDVLPNNCSTSESRFSSRDMVKRRNTEGESS
SSAKGKKNTKASQREKHVTRQTRGISISESRSGRNLDYSVNNHALSVQTRRSMNVNSRFR
GPVQDSLQTESSGLVQSLHRPETPDLNLESSSQLFTDGSSSSDFSSYSFPGNDIDDLPSV
VPFTSAELGINRLMNQQALQRYNMDGVAQVLLALERMEEDEELTYEQLLALETNLLLSGL
NFYDQHRDMRLDIDSMSYEELLALEERMGTVSTALPEEAVSKCLQRSIYQGMHSELGAFG
GDGDEAEIKCSICQEDYVIGDEIGKLECKHGYHMECVQQWLKHKNWCPICKTSAAASSKL
TTAPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400075959
Transcript Infomation

pacid=37469436 locus=PGSC0003DMG400029544 ID=PGSC0003DMT400075959.v4.03 annot-version=v4.03
Sequence

ATGGATGTATATTCTGGCAAAAGAGCTAAAAATGGGCTTGTCGCGCCCAGAAGAGGTTTA
AGGGATACTGCTGATAGCAGAGATGAAGATGTTCAGCTGTGCTCGCGGCTTGAATGCAGT
GGCCGGCTCAACCATTTGAAGAGCAGCTGTGTTGGAACTAAAGAGAAATCCAGATCATTT
AAACCTACTTTTAATGCTTCGAATGGGAAGGATGTGGTTGGGAGTTCATCTAGGACATCT
TCAGTGCTGAGTGTAAGAAACGCACGCGAGGAATCTCACATAAAATCTTTCTCTCAAGTT
GGAAATGATCAGTCAGTAATTAGCTCTTTGAATGGTGTGCCAGAAGTTACAGAACAAATT
CAGTCTTCGCCAGAGTATCAACTCAATATTAGTTCAGCAGCGAGAGACACTAGATCAAGC
AAAGCTAGATCAACAGAAGCAGGACACTCTAGTGGAACATCCAGTAGTAAACCTCGTAAA
ATAGTTTGTCACAAGTCTGGTTCTTACAATCAACATACTCCAATGCATGCCTCTGTTTCT
TCACAATCTAAAGCCATTGATTCTGGAAAGCGGCCCTGTAGCAGTGGGGCTGGATATGGG
TTGAGAAATCTAAAATGTAAGTCCATATCAGATGTCCTCCCAAATAATTGTTCAACGTCG
GAATCAAGATTTAGTAGTAGGGACATGGTAAAAAGGAGAAATACCGAAGGTGAAAGCAGT
TCATCTGCTAAAGGGAAGAAAAATACCAAGGCATCACAGAGAGAAAAGCATGTCACTCGT
CAAACTCGTGGAATCTCCATCTCTGAGTCAAGAAGTGGCAGAAATTTGGATTATAGTGTG
AATAATCATGCTTTGTCAGTTCAGACCCGCAGGTCGATGAATGTGAATTCTAGGTTTAGG
GGTCCAGTACAAGATTCATTGCAAACTGAGTCCTCTGGCTTAGTCCAAAGTTTACATCGG
CCTGAAACGCCAGATCTCAATCTGGAGTCTTCAAGCCAATTGTTCACAGATGGCTCTTCA
TCAAGTGATTTTAGTTCTTATAGTTTTCCTGGAAATGATATTGATGATTTACCCAGTGTA
GTGCCCTTCACTTCTGCCGAACTAGGCATTAACCGATTAATGAACCAGCAAGCCTTACAG
CGATATAACATGGATGGAGTTGCTCAGGTATTATTGGCACTTGAGAGAATGGAAGAAGAT
GAAGAGTTAACATATGAGCAGCTGCTTGCATTGGAGACGAACTTGCTGCTTAGCGGCCTT
AACTTCTATGACCAGCATAGGGACATGAGACTGGATATAGATAGCATGTCCTATGAGGAA
TTACTAGCTCTTGAAGAGAGGATGGGCACTGTCAGCACAGCTCTGCCGGAGGAGGCAGTA
TCAAAGTGTCTTCAAAGAAGCATTTATCAAGGCATGCACTCGGAACTAGGGGCATTTGGA
GGTGATGGGGATGAAGCTGAGATCAAATGCAGTATTTGTCAGGAGGATTATGTGATTGGG
GATGAAATCGGAAAGTTGGAATGCAAGCATGGTTATCACATGGAATGTGTACAACAATGG
TTAAAGCATAAGAATTGGTGCCCAATCTGCAAGACATCAGCAGCAGCTTCATCAAAGCTA
ACAACAGCACCATCTTAG