Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075834
CDS Infomation

pacid=37473268 polypeptide=PGSC0003DMP400051363 locus=PGSC0003DMG400029482 ID=PGSC0003DMT400075834.v4.03 annot-version=v4.03
Sequence

ATGGACGGCGTAATGTCGGCGTCGGACCAGCAGATGTTAGTTTCTTCTTTCCTCGAAATC
GCCGTTGGTCAAACCGCCGATACTGCCCGGCAGTTCCTCCAGGCAACAAGCTGGAAGCTT
GAGGAAGCAATTCAGCTTTTCTACATAGGAAATGAGAGTGGGGCAGCAGCATTTTTTAAC
TCTCCACAATTGGGGAATGATGCACTTCTTGGTGATCCAAGCTTGAGTGGAGTTGTAAAT
GACTCAGTAGACACCAATTTGGTACAAGGTGATGGAGATGATGTGCGTCCACCTTTACCT
GTAAAAAGGGAAGTTCTTTATGACAATGCGGTACTTTATGGTTCTTCGGGAATGGGAGGT
TCATCACGTGAACCTCGTCTAGTAGTTCCCTTTCGCAACTTTGAGGAGGAAATGAAGCAT
CCGGGAGTCTGGGAGGCAGAGAAACGTTCTACTTCTACAGCAGATGCTGCTCAAGACAAT
CTTGCTTCTTTGTATCGTCCTCCTTTTGCCTTGATGTACCATGGGTCTTTTGAGAAGGCA
AAAGATGCTGCTAGAGCGCAAAACAAATGGCTCTTGGTGAATATGCAGTCCACGCGAGAA
TTCAGCTCACATATGCTTAACCGAGACACTTGGGCTAATGAGGCTGTTGCCCAGACTATC
AAAAGTAACTTCATCTTCTGGCAGGTGTATGATGATACTGAGGAGGGCAGCAAAGTTTGC
ACGTACTACAAGTTAGATTCTATGCCTGTCGTATTGGTAATTGATCCTATAACAGGTCAG
AAGATGCGTTCTTGGCGTGGAATGGTTCAGCCAGAAACTTTGCTAGAGGATCTCCTATCC
TTCATGGATGCTAGCCCCTCAGAATATCATGTTAATCTATCTCATAAACGACCCAGAGAA
ACTCCTCAGGCACCTCGTCATCCTCAACCTCAGCCTCAGCCTCTGCCTCAGCCTCAGAAT
GAAGTTGGAGAAGAGGATGAAGAACTACAACGAGCATTGGCAGCCTCTATGGAAGGTATA
GAAGATTCTGGTTCAGTTGCCTCTAAAGAGACTAATGAAGCTGCCAGTGATGTTGTAAAA
GAGGAGAACTTGATAAAGAAGCCTTCTTATCCACCTCTACCTGAAGAACCCAAGGGTGAC
AGGAACCTTCTCTGCAGAGTTGCAATTCGCTTTCCTGATGGACGCAGGCTTCAAAGGAAT
TTCTTACGAACCGACTCAATTAAGCTGCTATGGTCCTTCTGTTCAACTCAGTTTGAGGAA
GCTGAGTCGAGGCCATTCAAATTCACGCAAGCAATTCCAGGTGTATCAAAGTTTTTGGAG
TTCGATAACAACATGACCTTTGAGGAATCCGGTCTTGCCAATTCTATTATTTCATTCACT
TGGGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400051363
PEP Infomation

pacid=37473268 transcript=PGSC0003DMT400075834 locus=PGSC0003DMG400029482 ID=PGSC0003DMT400075834.v4.03 annot-version=v4.03
Sequence

MDGVMSASDQQMLVSSFLEIAVGQTADTARQFLQATSWKLEEAIQLFYIGNESGAAAFFN
SPQLGNDALLGDPSLSGVVNDSVDTNLVQGDGDDVRPPLPVKREVLYDNAVLYGSSGMGG
SSREPRLVVPFRNFEEEMKHPGVWEAEKRSTSTADAAQDNLASLYRPPFALMYHGSFEKA
KDAARAQNKWLLVNMQSTREFSSHMLNRDTWANEAVAQTIKSNFIFWQVYDDTEEGSKVC
TYYKLDSMPVVLVIDPITGQKMRSWRGMVQPETLLEDLLSFMDASPSEYHVNLSHKRPRE
TPQAPRHPQPQPQPLPQPQNEVGEEDEELQRALAASMEGIEDSGSVASKETNEAASDVVK
EENLIKKPSYPPLPEEPKGDRNLLCRVAIRFPDGRRLQRNFLRTDSIKLLWSFCSTQFEE
AESRPFKFTQAIPGVSKFLEFDNNMTFEESGLANSIISFTWE*

Transcript Sequence

Transcript ID

PGSC0003DMT400075834
Transcript Infomation

pacid=37473268 locus=PGSC0003DMG400029482 ID=PGSC0003DMT400075834.v4.03 annot-version=v4.03
Sequence

ATGGACGGCGTAATGTCGGCGTCGGACCAGCAGATGTTAGTTTCTTCTTTCCTCGAAATC
GCCGTTGGTCAAACCGCCGATACTGCCCGGCAGTTCCTCCAGGCAACAAGCTGGAAGCTT
GAGGAAGCAATTCAGCTTTTCTACATAGGAAATGAGAGTGGGGCAGCAGCATTTTTTAAC
TCTCCACAATTGGGGAATGATGCACTTCTTGGTGATCCAAGCTTGAGTGGAGTTGTAAAT
GACTCAGTAGACACCAATTTGGTACAAGGTGATGGAGATGATGTGCGTCCACCTTTACCT
GTAAAAAGGGAAGTTCTTTATGACAATGCGGTACTTTATGGTTCTTCGGGAATGGGAGGT
TCATCACGTGAACCTCGTCTAGTAGTTCCCTTTCGCAACTTTGAGGAGGAAATGAAGCAT
CCGGGAGTCTGGGAGGCAGAGAAACGTTCTACTTCTACAGCAGATGCTGCTCAAGACAAT
CTTGCTTCTTTGTATCGTCCTCCTTTTGCCTTGATGTACCATGGGTCTTTTGAGAAGGCA
AAAGATGCTGCTAGAGCGCAAAACAAATGGCTCTTGGTGAATATGCAGTCCACGCGAGAA
TTCAGCTCACATATGCTTAACCGAGACACTTGGGCTAATGAGGCTGTTGCCCAGACTATC
AAAAGTAACTTCATCTTCTGGCAGGTGTATGATGATACTGAGGAGGGCAGCAAAGTTTGC
ACGTACTACAAGTTAGATTCTATGCCTGTCGTATTGGTAATTGATCCTATAACAGGTCAG
AAGATGCGTTCTTGGCGTGGAATGGTTCAGCCAGAAACTTTGCTAGAGGATCTCCTATCC
TTCATGGATGCTAGCCCCTCAGAATATCATGTTAATCTATCTCATAAACGACCCAGAGAA
ACTCCTCAGGCACCTCGTCATCCTCAACCTCAGCCTCAGCCTCTGCCTCAGCCTCAGAAT
GAAGTTGGAGAAGAGGATGAAGAACTACAACGAGCATTGGCAGCCTCTATGGAAGGTATA
GAAGATTCTGGTTCAGTTGCCTCTAAAGAGACTAATGAAGCTGCCAGTGATGTTGTAAAA
GAGGAGAACTTGATAAAGAAGCCTTCTTATCCACCTCTACCTGAAGAACCCAAGGGTGAC
AGGAACCTTCTCTGCAGAGTTGCAATTCGCTTTCCTGATGGACGCAGGCTTCAAAGGAAT
TTCTTACGAACCGACTCAATTAAGCTGCTATGGTCCTTCTGTTCAACTCAGTTTGAGGAA
GCTGAGTCGAGGCCATTCAAATTCACGCAAGCAATTCCAGGTGTATCAAAGTTTTTGGAG
TTCGATAACAACATGACCTTTGAGGAATCCGGTCTTGCCAATTCTATTATTTCATTCACT
TGGGAGTGA