Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075818
CDS Infomation

pacid=37476289 polypeptide=PGSC0003DMP400051356 locus=PGSC0003DMG400029476 ID=PGSC0003DMT400075818.v4.03 annot-version=v4.03
Sequence

ATGAAGAGCTCAATGGATCTTCTTGTTCTACTTCTTCTTATTCCACATTTACTAGCTTTT
GCCTTTTCTGCTAATGAAGAGGCGTTCGTTGGTGTAAACATTGGAACTGATGTCTCTGAC
ATGCCCAGTCCAGTTCAGGTGGTGGCTCTCCTCAAAGCACAGCAGATTCGGCATGTCAGG
CTATTTGATGCTGACCAAGCTATGCTACTTGCACTTGCTCATACTGAAATCCGAGTCACT
GTTTCTGTACCAAATGATCAGCTCTTAGGAATTGGTCAGTCGAATTCCACTGCTGCCAAT
TGGGTTTCCCGGAATATCCTCTCTCATGTTCCTGCCACCAACATCACAGCCATCGCCATT
GGTTCTGAAGTCCTTACCACTCTTCCTAATGCTGCTCCTCTCTTGGTCTCTGCCATGAAA
TTTATTCACTCTGCCCTTGTTGCTGCTAATCTAGACACTAAGATAAAAGTCTCCACCCCT
CATTCATCTTTTATCATCCTCGACTCATTTCCACCCTCACAAGCTTTCTTCAATCGATCG
TTAGATCCTGTCATGGTTCCGTTGCTCAAATTTTTGCAGGACACCGGTTCCTATTTCATG
CTCAACGTATATCCATATTATGATTACATGAAATCCAATGGTGTGATCGCGTTGGACTAT
GCTCTCTTTCGCCCCCTCCCACCTAACAAGGAGGCTGTTGATTCTAACACACTCCTCCAC
TATACTAATGTATTTGATGCTGTTGTTGATGCAGCATATTTTTCTATGTCCTACTTGAAC
TTCACTAACATTCCTGTTGTGGTAACGGAGTCAGGTTGGCCATCTAAGGGTGACTCCACT
GAGCCGGATGCTTCTCTTGACAATGCTAATACTTATAATAGTAACTTGATTAGGCATGTT
CTTAACAACACCGGGACGCCCAAGCATCCTGGGATTGCAGTTAGTACGTACATTTATGAG
CTTTACAACGAAGATCTCAGACCTGGTTCAATATCTGAGAAGAACTGGGGGCTTTTTGAT
TCCAATGGAGTGCCAGTTTATATCATGCATTTGACTGGATCTGGAACGGTGTTGGCCAAT
GACACCACAAACCAAACCTATTGTGTTGCAAAGGAAAACGCAGATAAAAAAATGGTGCAA
GCTGCACTGGATTGGGCTTGTGGACCGGGGAAAGTTGACTGTACTCCTTTGTTGCAAGAA
AATCCTTGCTATGACCCAAATACTGTGTTTGCTCATGCATCATATGCTTTTGATGCGTAT
TATCACAAGATGGGCATGGCCGATGGAACTTGCAACTTCAATGGGGTTGCTAAAGTCACT
ACCACTGATCCTAGTCATAGTTCTTGTATATATCCTGGAAGTGGAGGGAGAAATGGCACC
TTCACGAATAGCTCCACGGTTGCTCCATCATCAGACTCAGCATCTGGCTGTCATTCACAA
TATTCCCACGACGTTCATACTTTCTTGAGCTCTCTAATTGTTGGTTTGTTGACACTCTCG
ACTGCAGCTTTCTTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400051356
PEP Infomation

pacid=37476289 transcript=PGSC0003DMT400075818 locus=PGSC0003DMG400029476 ID=PGSC0003DMT400075818.v4.03 annot-version=v4.03
Sequence

MKSSMDLLVLLLLIPHLLAFAFSANEEAFVGVNIGTDVSDMPSPVQVVALLKAQQIRHVR
LFDADQAMLLALAHTEIRVTVSVPNDQLLGIGQSNSTAANWVSRNILSHVPATNITAIAI
GSEVLTTLPNAAPLLVSAMKFIHSALVAANLDTKIKVSTPHSSFIILDSFPPSQAFFNRS
LDPVMVPLLKFLQDTGSYFMLNVYPYYDYMKSNGVIALDYALFRPLPPNKEAVDSNTLLH
YTNVFDAVVDAAYFSMSYLNFTNIPVVVTESGWPSKGDSTEPDASLDNANTYNSNLIRHV
LNNTGTPKHPGIAVSTYIYELYNEDLRPGSISEKNWGLFDSNGVPVYIMHLTGSGTVLAN
DTTNQTYCVAKENADKKMVQAALDWACGPGKVDCTPLLQENPCYDPNTVFAHASYAFDAY
YHKMGMADGTCNFNGVAKVTTTDPSHSSCIYPGSGGRNGTFTNSSTVAPSSDSASGCHSQ
YSHDVHTFLSSLIVGLLTLSTAAFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400075818
Transcript Infomation

pacid=37476289 locus=PGSC0003DMG400029476 ID=PGSC0003DMT400075818.v4.03 annot-version=v4.03
Sequence

ATGAAGAGCTCAATGGATCTTCTTGTTCTACTTCTTCTTATTCCACATTTACTAGCTTTT
GCCTTTTCTGCTAATGAAGAGGCGTTCGTTGGTGTAAACATTGGAACTGATGTCTCTGAC
ATGCCCAGTCCAGTTCAGGTGGTGGCTCTCCTCAAAGCACAGCAGATTCGGCATGTCAGG
CTATTTGATGCTGACCAAGCTATGCTACTTGCACTTGCTCATACTGAAATCCGAGTCACT
GTTTCTGTACCAAATGATCAGCTCTTAGGAATTGGTCAGTCGAATTCCACTGCTGCCAAT
TGGGTTTCCCGGAATATCCTCTCTCATGTTCCTGCCACCAACATCACAGCCATCGCCATT
GGTTCTGAAGTCCTTACCACTCTTCCTAATGCTGCTCCTCTCTTGGTCTCTGCCATGAAA
TTTATTCACTCTGCCCTTGTTGCTGCTAATCTAGACACTAAGATAAAAGTCTCCACCCCT
CATTCATCTTTTATCATCCTCGACTCATTTCCACCCTCACAAGCTTTCTTCAATCGATCG
TTAGATCCTGTCATGGTTCCGTTGCTCAAATTTTTGCAGGACACCGGTTCCTATTTCATG
CTCAACGTATATCCATATTATGATTACATGAAATCCAATGGTGTGATCGCGTTGGACTAT
GCTCTCTTTCGCCCCCTCCCACCTAACAAGGAGGCTGTTGATTCTAACACACTCCTCCAC
TATACTAATGTATTTGATGCTGTTGTTGATGCAGCATATTTTTCTATGTCCTACTTGAAC
TTCACTAACATTCCTGTTGTGGTAACGGAGTCAGGTTGGCCATCTAAGGGTGACTCCACT
GAGCCGGATGCTTCTCTTGACAATGCTAATACTTATAATAGTAACTTGATTAGGCATGTT
CTTAACAACACCGGGACGCCCAAGCATCCTGGGATTGCAGTTAGTACGTACATTTATGAG
CTTTACAACGAAGATCTCAGACCTGGTTCAATATCTGAGAAGAACTGGGGGCTTTTTGAT
TCCAATGGAGTGCCAGTTTATATCATGCATTTGACTGGATCTGGAACGGTGTTGGCCAAT
GACACCACAAACCAAACCTATTGTGTTGCAAAGGAAAACGCAGATAAAAAAATGGTGCAA
GCTGCACTGGATTGGGCTTGTGGACCGGGGAAAGTTGACTGTACTCCTTTGTTGCAAGAA
AATCCTTGCTATGACCCAAATACTGTGTTTGCTCATGCATCATATGCTTTTGATGCGTAT
TATCACAAGATGGGCATGGCCGATGGAACTTGCAACTTCAATGGGGTTGCTAAAGTCACT
ACCACTGATCCTAGTCATAGTTCTTGTATATATCCTGGAAGTGGAGGGAGAAATGGCACC
TTCACGAATAGCTCCACGGTTGCTCCATCATCAGACTCAGCATCTGGCTGTCATTCACAA
TATTCCCACGACGTTCATACTTTCTTGAGCTCTCTAATTGTTGGTTTGTTGACACTCTCG
ACTGCAGCTTTCTTGTAG