Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075775
CDS Infomation

pacid=37475504 polypeptide=PGSC0003DMP400051320 locus=PGSC0003DMG400029463 ID=PGSC0003DMT400075775.v4.03 annot-version=v4.03
Sequence

ATGGGTGAGAAGATGCAAAGCCACCATATGGTGAGTGTGAAGGGGAGTGAGCAATTTAAC
TCAAAGAGAAAGCATAGATTTGTACCTTCACAGGGTTATCTTCCAAAGCTTTTTGCTTTA
TGGATTATCTGGTGTACATTTTTCAGCATTGCTTTGTACTTTTATATGGATGCTAATCAC
AAGGAGAAAAGAAAAGAAGGGCTTGTGAGTATGTGTGATCAAAGGGCAAGGATGTTACAA
GATCAATTCAGTGTTAGTGTGAACCATGTACATGCCCTTGCTATACTTGTATCAACTTTC
CATTATGAGAAGAATCCATCAGCAATTGATCAGAATACTTTTGCTGAGTACACTGCTAGA
ACTGCCTTTGAGAGGCCACTATTAAGTGGGGTGGCATATGCAGAGAGAGTTTTAAACTCA
GAAAGGGAAGAATTTGAGAGAGAACATGGATGGACTATTAAAACAATGGAAAAAAAGCCT
TCACCAATCAGAGATGAGTATTCTCCAGTTATATTTTCTCAAGAGACTGTTTCCTACATA
GAATCACTTGACATGATGTCAGGAGAGGAGGATCGCGAAAACATCTTAAGAGCTAGGGCC
AGTGGGAAGGCAGTTCTTACAAGCCCCTTCAGGCTTCTGGGTTCTCATCACCTTGGTGTT
GTTTTGACATTCCCTGTTTACAGATCCAAGCTTCCGGAAAACCCGACGGAGCACGAACGG
GTTGAAGCAACTGCAGGGTTTCTTGGTGGAGCCTTTGATGTTGAGTCTCTCGTTGAGTGT
CTACTCGGGCAACTTGCTGCAAATCATCCAATAATTGTAAATGTCTATGATGTTACAAAC
TCCTCTGATCCTTTAATCATGTACGGACACCAGAACCCCAATGGTGATGCCTCACTTAAG
CAAGTAAGCAAGCTTGATTTTGGTGATCCATTTCGTAAGCATGAGATGATTTGTAGGTAT
CTTTACGAAGATCCTATATCTTGGGGTGCAGTGACCACTGCAGTTTTCATTTTTACCATC
TTCCTCTTAATTGGCTACACGGGTTACAAATCTGCAAGCCACATTAATAAAGTAGAGGAT
GATTTCCATAAAATGCAGGAGCTAAAGGTTCAAGCTGAAGCAGCTGATGTTGCCAAATCC
CAGTTCTTGGCTACTGTTTCACATGAAATAAGAACTCCTATGAATGGAATCCTAGGAATG
CTTGCTTTGCTTCTAGATACGGATCTGAGTTCAACTCAAAGAGATTATGCTCAAACTGCT
CAAGATTGTGGAAAGTCACTGATAAGATTGATAAATGAAGTGCTTGATCGGGCTAAAATT
GAAGCTGGCAAGTTAGAACTTGAGGCAGTTCCATTTGACCTTCGCTCTATACTGGATGAT
GTTCTCTCTTTATTCTCTGATGAGTCAAGGCGCAAAGGTGTTGAGTTGGCCGTCTTTGTT
TCTGATAAAGTGCCTGAAATTGTTATGGGGGATCCAGGAAGATTCAGACAAGTGATAACA
AATCTGGTGAACAACTCGGTCAAATTCACTCTACGAGGGCATATATTTGTTCAAGTTCAT
CTGGCAGAACAAAAAAAAGATGGTGACAAAACTGACACCTGCTTGAATGGAGGATCTGAA
AGTATTATTTCTTCTAGTGCTTTTCATTTCAAGACCTTAAGTGGTTATGAAACTGCTGAT
AGCCAGAACACTTGGAACACATTCAAGCATATAATTGCTGACAATGGGTTGTACTATGAA
TCTGCAACTAAGGTGGTGAATGATGATCTCTCTCGGGATGTCACTGTAATGGTTAGTGTT
GAAGATACTGGGATTGGGATCCCTTTGAAAACACAAGATCGAGTTTTTACACCATTCATG
CAGGCAGACAGTTCAACTTCTAGAAAGTATGGAGGAACTGGTATTGGGTTAAGCATTAGC
AAGTGTCTCGTCGAGCTGATGGGCGGTCATATAAGTTTCATTAGCCGTCCCAAGATTGGA
AGCACATTTTCTTTCAGTGTTAGCTTCCTAAGATGCGAGAAACATGCTGTTGGTGATCTG
AAAAAATCTCATTCTGATGATTTGCCTACTTCATTCAAAGGTCTAAATGCTATTATAGTT
GATGAAAAGCCTGTAAGAGCTGCTGTAACAGGATACCATCTGAAGAGACTTGGTATTCGG
GCAGAAGTTGTCAGTAGCATCAAGAGAGCAGCAGCCACTCTTGGGAAAAATGGTTCTGTT
GTTTCCAAGAAGCTGGACATGATTCTGGTCGAGAAGGACTCGTGGATATCTGAAGATGTT
GACCTAAATTTACACTTTCCAGACATCAATCAAAATGGACACATGTACAAGTTACCGAAG
ATGATCCTTCTGGCGACTAATTTTACCAACACTGCTGAACATGAAAAGGCTAAAGCAGTA
GGTTTTTCAGTGATAATGAAACCTCTTAGAGCAAGTATGCTGGCTGCATGCCTTCAGCAG
CTAATTGGAATTGGAAACAAGAGCCGAGGAAAAGATATGTGCAATGGATCTCCATCCCTT
CGTGGCCTACTATGTGGTATGAAAATTTTGGTGGTTGATGATAATAGAGTAAATCGCAGG
GTTGCTGCTGGTGCACTCAAAAAGTTTGGGGCCGAGGTAGAGTGTGCTGAGAGTGGGAAA
GCTGCTCTTGCATTGCTGCAGTTACCACACAATTTTGATGCATGCTTTATGGATATTCAG
ATGCCAGAAATGGATGGGTTTGAGGCTACACGTCGAATTAGGGAACTGGAGAGCATTGCA
AATGAACAACAGAATGGAGTGTTGAACTGGGATGGAGGTACAAAGAGGCACATGTGGCAC
ATGCCGATATTGGCCATGACTGCTGATGTAATTCATGCCACATTAGAGAAATGCCTCAAG
TGTGGAATGGATGGTTACGTCTCAAAACCATTCGAGGAAGAGAATCTTTATGAAGCTGTA
TCCAAGTTCTTCGAATCCAAGCCTAACTCGGACAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400051320
PEP Infomation

pacid=37475504 transcript=PGSC0003DMT400075775 locus=PGSC0003DMG400029463 ID=PGSC0003DMT400075775.v4.03 annot-version=v4.03
Sequence

MGEKMQSHHMVSVKGSEQFNSKRKHRFVPSQGYLPKLFALWIIWCTFFSIALYFYMDANH
KEKRKEGLVSMCDQRARMLQDQFSVSVNHVHALAILVSTFHYEKNPSAIDQNTFAEYTAR
TAFERPLLSGVAYAERVLNSEREEFEREHGWTIKTMEKKPSPIRDEYSPVIFSQETVSYI
ESLDMMSGEEDRENILRARASGKAVLTSPFRLLGSHHLGVVLTFPVYRSKLPENPTEHER
VEATAGFLGGAFDVESLVECLLGQLAANHPIIVNVYDVTNSSDPLIMYGHQNPNGDASLK
QVSKLDFGDPFRKHEMICRYLYEDPISWGAVTTAVFIFTIFLLIGYTGYKSASHINKVED
DFHKMQELKVQAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTA
QDCGKSLIRLINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSDESRRKGVELAVFV
SDKVPEIVMGDPGRFRQVITNLVNNSVKFTLRGHIFVQVHLAEQKKDGDKTDTCLNGGSE
SIISSSAFHFKTLSGYETADSQNTWNTFKHIIADNGLYYESATKVVNDDLSRDVTVMVSV
EDTGIGIPLKTQDRVFTPFMQADSSTSRKYGGTGIGLSISKCLVELMGGHISFISRPKIG
STFSFSVSFLRCEKHAVGDLKKSHSDDLPTSFKGLNAIIVDEKPVRAAVTGYHLKRLGIR
AEVVSSIKRAAATLGKNGSVVSKKLDMILVEKDSWISEDVDLNLHFPDINQNGHMYKLPK
MILLATNFTNTAEHEKAKAVGFSVIMKPLRASMLAACLQQLIGIGNKSRGKDMCNGSPSL
RGLLCGMKILVVDDNRVNRRVAAGALKKFGAEVECAESGKAALALLQLPHNFDACFMDIQ
MPEMDGFEATRRIRELESIANEQQNGVLNWDGGTKRHMWHMPILAMTADVIHATLEKCLK
CGMDGYVSKPFEEENLYEAVSKFFESKPNSDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400075775
Transcript Infomation

pacid=37475504 locus=PGSC0003DMG400029463 ID=PGSC0003DMT400075775.v4.03 annot-version=v4.03
Sequence

ATGGGTGAGAAGATGCAAAGCCACCATATGGTGAGTGTGAAGGGGAGTGAGCAATTTAAC
TCAAAGAGAAAGCATAGATTTGTACCTTCACAGGGTTATCTTCCAAAGCTTTTTGCTTTA
TGGATTATCTGGTGTACATTTTTCAGCATTGCTTTGTACTTTTATATGGATGCTAATCAC
AAGGAGAAAAGAAAAGAAGGGCTTGTGAGTATGTGTGATCAAAGGGCAAGGATGTTACAA
GATCAATTCAGTGTTAGTGTGAACCATGTACATGCCCTTGCTATACTTGTATCAACTTTC
CATTATGAGAAGAATCCATCAGCAATTGATCAGAATACTTTTGCTGAGTACACTGCTAGA
ACTGCCTTTGAGAGGCCACTATTAAGTGGGGTGGCATATGCAGAGAGAGTTTTAAACTCA
GAAAGGGAAGAATTTGAGAGAGAACATGGATGGACTATTAAAACAATGGAAAAAAAGCCT
TCACCAATCAGAGATGAGTATTCTCCAGTTATATTTTCTCAAGAGACTGTTTCCTACATA
GAATCACTTGACATGATGTCAGGAGAGGAGGATCGCGAAAACATCTTAAGAGCTAGGGCC
AGTGGGAAGGCAGTTCTTACAAGCCCCTTCAGGCTTCTGGGTTCTCATCACCTTGGTGTT
GTTTTGACATTCCCTGTTTACAGATCCAAGCTTCCGGAAAACCCGACGGAGCACGAACGG
GTTGAAGCAACTGCAGGGTTTCTTGGTGGAGCCTTTGATGTTGAGTCTCTCGTTGAGTGT
CTACTCGGGCAACTTGCTGCAAATCATCCAATAATTGTAAATGTCTATGATGTTACAAAC
TCCTCTGATCCTTTAATCATGTACGGACACCAGAACCCCAATGGTGATGCCTCACTTAAG
CAAGTAAGCAAGCTTGATTTTGGTGATCCATTTCGTAAGCATGAGATGATTTGTAGGTAT
CTTTACGAAGATCCTATATCTTGGGGTGCAGTGACCACTGCAGTTTTCATTTTTACCATC
TTCCTCTTAATTGGCTACACGGGTTACAAATCTGCAAGCCACATTAATAAAGTAGAGGAT
GATTTCCATAAAATGCAGGAGCTAAAGGTTCAAGCTGAAGCAGCTGATGTTGCCAAATCC
CAGTTCTTGGCTACTGTTTCACATGAAATAAGAACTCCTATGAATGGAATCCTAGGAATG
CTTGCTTTGCTTCTAGATACGGATCTGAGTTCAACTCAAAGAGATTATGCTCAAACTGCT
CAAGATTGTGGAAAGTCACTGATAAGATTGATAAATGAAGTGCTTGATCGGGCTAAAATT
GAAGCTGGCAAGTTAGAACTTGAGGCAGTTCCATTTGACCTTCGCTCTATACTGGATGAT
GTTCTCTCTTTATTCTCTGATGAGTCAAGGCGCAAAGGTGTTGAGTTGGCCGTCTTTGTT
TCTGATAAAGTGCCTGAAATTGTTATGGGGGATCCAGGAAGATTCAGACAAGTGATAACA
AATCTGGTGAACAACTCGGTCAAATTCACTCTACGAGGGCATATATTTGTTCAAGTTCAT
CTGGCAGAACAAAAAAAAGATGGTGACAAAACTGACACCTGCTTGAATGGAGGATCTGAA
AGTATTATTTCTTCTAGTGCTTTTCATTTCAAGACCTTAAGTGGTTATGAAACTGCTGAT
AGCCAGAACACTTGGAACACATTCAAGCATATAATTGCTGACAATGGGTTGTACTATGAA
TCTGCAACTAAGGTGGTGAATGATGATCTCTCTCGGGATGTCACTGTAATGGTTAGTGTT
GAAGATACTGGGATTGGGATCCCTTTGAAAACACAAGATCGAGTTTTTACACCATTCATG
CAGGCAGACAGTTCAACTTCTAGAAAGTATGGAGGAACTGGTATTGGGTTAAGCATTAGC
AAGTGTCTCGTCGAGCTGATGGGCGGTCATATAAGTTTCATTAGCCGTCCCAAGATTGGA
AGCACATTTTCTTTCAGTGTTAGCTTCCTAAGATGCGAGAAACATGCTGTTGGTGATCTG
AAAAAATCTCATTCTGATGATTTGCCTACTTCATTCAAAGGTCTAAATGCTATTATAGTT
GATGAAAAGCCTGTAAGAGCTGCTGTAACAGGATACCATCTGAAGAGACTTGGTATTCGG
GCAGAAGTTGTCAGTAGCATCAAGAGAGCAGCAGCCACTCTTGGGAAAAATGGTTCTGTT
GTTTCCAAGAAGCTGGACATGATTCTGGTCGAGAAGGACTCGTGGATATCTGAAGATGTT
GACCTAAATTTACACTTTCCAGACATCAATCAAAATGGACACATGTACAAGTTACCGAAG
ATGATCCTTCTGGCGACTAATTTTACCAACACTGCTGAACATGAAAAGGCTAAAGCAGTA
GGTTTTTCAGTGATAATGAAACCTCTTAGAGCAAGTATGCTGGCTGCATGCCTTCAGCAG
CTAATTGGAATTGGAAACAAGAGCCGAGGAAAAGATATGTGCAATGGATCTCCATCCCTT
CGTGGCCTACTATGTGGTATGAAAATTTTGGTGGTTGATGATAATAGAGTAAATCGCAGG
GTTGCTGCTGGTGCACTCAAAAAGTTTGGGGCCGAGGTAGAGTGTGCTGAGAGTGGGAAA
GCTGCTCTTGCATTGCTGCAGTTACCACACAATTTTGATGCATGCTTTATGGATATTCAG
ATGCCAGAAATGGATGGGTTTGAGGCTACACGTCGAATTAGGGAACTGGAGAGCATTGCA
AATGAACAACAGAATGGAGTGTTGAACTGGGATGGAGGTACAAAGAGGCACATGTGGCAC
ATGCCGATATTGGCCATGACTGCTGATGTAATTCATGCCACATTAGAGAAATGCCTCAAG
TGTGGAATGGATGGTTACGTCTCAAAACCATTCGAGGAAGAGAATCTTTATGAAGCTGTA
TCCAAGTTCTTCGAATCCAAGCCTAACTCGGACAAATAG