Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075612
CDS Infomation

pacid=37447051 polypeptide=PGSC0003DMP400051217 locus=PGSC0003DMG400029409 ID=PGSC0003DMT400075612.v4.03 annot-version=v4.03
Sequence

ATGGCGATGGATCGAGATCACGAGCTTGAAGAAGGGGTAACTGTAGAGGAGGAATTTGGA
TCAAGCTGTCAAACGAGTCCACAAGACAAACGAGAAGTGGTACGCGAACTTATTGGTGTG
ATTCATACCGTTGGATCGTATGAAGAGTATAGGAGATCACAGAGAGAGGAATGTCATTAT
CTCTCTGAAAGATTGAAGCTTTTACTACCTCTTTTCGAAGAGATTAGAGATTTCGAAGGA
CAGATCCCTGAATCGAGTATCGAATGTTTGATGAAATTGAAAAAGGCATTTTCATCCGCG
AAGAAATTGTTAAAAACTTGTCATTGTGGAAGTAAAATTTATCTGGCCATAGAAAGTGAG
GCTGTTATGGGAAGATTCTATTCTGTGTATGAAAGATTAAGTCAAGCTCTGGAAAACATG
CCTTATGATGATTTTGGAATTTCAGATGAAGAGAAAGAACAGGTGGAGTTACTGAGAGGG
CAATTTCGAAGAGCTAAGAAGCGAAATGATAGTCAAGACATGGAACTCACCATGGATTTG
ATGGTTGCACTATCTACAAATGATGATAGGAATGCAGATAGTGCTAGCATAGAGAGACTA
GGAAACAAGCTAGGTTTGCGTACTCTCGAGGACCTAAAGTTAGAAACAATATCAGTACGA
AGAGTAGTTAAAGAAAGAAAAGGTCGTCATGCAGAAGAGACGCAAAAGATAGTAGGTCTT
CTAAACAAATTCAGAAGTTTTGCAGGACTCGAAGAAATTGAACCGTTGATGATTAAAGTT
CATGAGAAATCCACTGCTTTGGCAATTCCAAATGAATTTCTCTGTCCGATTACATTAGAG
ATTATGGCGGATCCTCTTACTGTCTCAACCGGGCAGACATATGAAAGAGAGAACATACAA
CATTTGTTGGATTCTGGTTGCCAAACATGTCCGAAAACCGGGAAAATTTTGGAGCACTTG
TCCTTAACCCCAAACTTTGCTCTGAAGAATTTGATCCAACAATGGTGTGAGAAGAACAAT
TTTCAGCTTCCTCAAAAGCAAGAACCTCCAAAACCCGAGAGCCCCTCGGATGAAAGTGAT
GAACAAGTTTTGTCCTTGATTCAAGACTTATCCTCTAGTCATTTAGAAGTGCAGAGAAAG
GCTGTGAAAGAGATCAGGATGCTTTCGAAAGAAAATCCTGAAAATAGGACATTAGTAGTG
AATCGCGGAGGAATCCCACCACTCGTGCATCTACTATCCTATCCAGATTCAATAATTCAG
GAACATGCTGTGACGGCTCTTTTGAACCTATCGATTGATGAAACAAATAAAAAACTTATA
TCGAAAGAAGAACCTATTTTAGCCATAATTGAGATATTGCAGAATGGAAATGTTGGTGCT
AAAGAGAACTCTGCAGCAGCATTGTTTAGCTTATCTATGCTGGATGAAAACAAAGAAGCT
ATAGGTTTGTTAAACGGTATCCCACCGTTGATAGAATTGTTAAAAAATGGTACAATCCGA
GGTAAGAAGGATGCAATAACTGCATTATTCAACCTTTGTTTAAATGAGCAGAACGTTCGT
TTGGCAAATGAAGCTGGGATTGTAGCACCGTTGTTTCAGTTACTCGAGAAGAAAAACATA
GAGATGGTTGATGAGGCGTTGTCTCTACTGTTACTTCTTGCAACACATCAAGACGGAAGG
CAAGAAATGGGAAAACTTACGTTCATTGAAACACTCGTTAATCTGATGAGAGATGGCACT
CCAAAGAACAAGGAATGTTCAGTGGCGGTGCTTCATAGGTTAAGCATACACAATTCAAAT
CATATGCTCGCGGCACTTCAGTATGGTGTGTATGAGTATTTAGTAGAGATTGGTGAGAGT
GGGACTGATAGGGGACAACGAAAAGCTAAATCTATATTGCAGCATATGAGTAAAACAGAA
CAGATTCCTTGTCTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400051217
PEP Infomation

pacid=37447051 transcript=PGSC0003DMT400075612 locus=PGSC0003DMG400029409 ID=PGSC0003DMT400075612.v4.03 annot-version=v4.03
Sequence

MAMDRDHELEEGVTVEEEFGSSCQTSPQDKREVVRELIGVIHTVGSYEEYRRSQREECHY
LSERLKLLLPLFEEIRDFEGQIPESSIECLMKLKKAFSSAKKLLKTCHCGSKIYLAIESE
AVMGRFYSVYERLSQALENMPYDDFGISDEEKEQVELLRGQFRRAKKRNDSQDMELTMDL
MVALSTNDDRNADSASIERLGNKLGLRTLEDLKLETISVRRVVKERKGRHAEETQKIVGL
LNKFRSFAGLEEIEPLMIKVHEKSTALAIPNEFLCPITLEIMADPLTVSTGQTYERENIQ
HLLDSGCQTCPKTGKILEHLSLTPNFALKNLIQQWCEKNNFQLPQKQEPPKPESPSDESD
EQVLSLIQDLSSSHLEVQRKAVKEIRMLSKENPENRTLVVNRGGIPPLVHLLSYPDSIIQ
EHAVTALLNLSIDETNKKLISKEEPILAIIEILQNGNVGAKENSAAALFSLSMLDENKEA
IGLLNGIPPLIELLKNGTIRGKKDAITALFNLCLNEQNVRLANEAGIVAPLFQLLEKKNI
EMVDEALSLLLLLATHQDGRQEMGKLTFIETLVNLMRDGTPKNKECSVAVLHRLSIHNSN
HMLAALQYGVYEYLVEIGESGTDRGQRKAKSILQHMSKTEQIPCL*

Transcript Sequence

Transcript ID

PGSC0003DMT400075612
Transcript Infomation

pacid=37447051 locus=PGSC0003DMG400029409 ID=PGSC0003DMT400075612.v4.03 annot-version=v4.03
Sequence

ATGGCGATGGATCGAGATCACGAGCTTGAAGAAGGGGTAACTGTAGAGGAGGAATTTGGA
TCAAGCTGTCAAACGAGTCCACAAGACAAACGAGAAGTGGTACGCGAACTTATTGGTGTG
ATTCATACCGTTGGATCGTATGAAGAGTATAGGAGATCACAGAGAGAGGAATGTCATTAT
CTCTCTGAAAGATTGAAGCTTTTACTACCTCTTTTCGAAGAGATTAGAGATTTCGAAGGA
CAGATCCCTGAATCGAGTATCGAATGTTTGATGAAATTGAAAAAGGCATTTTCATCCGCG
AAGAAATTGTTAAAAACTTGTCATTGTGGAAGTAAAATTTATCTGGCCATAGAAAGTGAG
GCTGTTATGGGAAGATTCTATTCTGTGTATGAAAGATTAAGTCAAGCTCTGGAAAACATG
CCTTATGATGATTTTGGAATTTCAGATGAAGAGAAAGAACAGGTGGAGTTACTGAGAGGG
CAATTTCGAAGAGCTAAGAAGCGAAATGATAGTCAAGACATGGAACTCACCATGGATTTG
ATGGTTGCACTATCTACAAATGATGATAGGAATGCAGATAGTGCTAGCATAGAGAGACTA
GGAAACAAGCTAGGTTTGCGTACTCTCGAGGACCTAAAGTTAGAAACAATATCAGTACGA
AGAGTAGTTAAAGAAAGAAAAGGTCGTCATGCAGAAGAGACGCAAAAGATAGTAGGTCTT
CTAAACAAATTCAGAAGTTTTGCAGGACTCGAAGAAATTGAACCGTTGATGATTAAAGTT
CATGAGAAATCCACTGCTTTGGCAATTCCAAATGAATTTCTCTGTCCGATTACATTAGAG
ATTATGGCGGATCCTCTTACTGTCTCAACCGGGCAGACATATGAAAGAGAGAACATACAA
CATTTGTTGGATTCTGGTTGCCAAACATGTCCGAAAACCGGGAAAATTTTGGAGCACTTG
TCCTTAACCCCAAACTTTGCTCTGAAGAATTTGATCCAACAATGGTGTGAGAAGAACAAT
TTTCAGCTTCCTCAAAAGCAAGAACCTCCAAAACCCGAGAGCCCCTCGGATGAAAGTGAT
GAACAAGTTTTGTCCTTGATTCAAGACTTATCCTCTAGTCATTTAGAAGTGCAGAGAAAG
GCTGTGAAAGAGATCAGGATGCTTTCGAAAGAAAATCCTGAAAATAGGACATTAGTAGTG
AATCGCGGAGGAATCCCACCACTCGTGCATCTACTATCCTATCCAGATTCAATAATTCAG
GAACATGCTGTGACGGCTCTTTTGAACCTATCGATTGATGAAACAAATAAAAAACTTATA
TCGAAAGAAGAACCTATTTTAGCCATAATTGAGATATTGCAGAATGGAAATGTTGGTGCT
AAAGAGAACTCTGCAGCAGCATTGTTTAGCTTATCTATGCTGGATGAAAACAAAGAAGCT
ATAGGTTTGTTAAACGGTATCCCACCGTTGATAGAATTGTTAAAAAATGGTACAATCCGA
GGTAAGAAGGATGCAATAACTGCATTATTCAACCTTTGTTTAAATGAGCAGAACGTTCGT
TTGGCAAATGAAGCTGGGATTGTAGCACCGTTGTTTCAGTTACTCGAGAAGAAAAACATA
GAGATGGTTGATGAGGCGTTGTCTCTACTGTTACTTCTTGCAACACATCAAGACGGAAGG
CAAGAAATGGGAAAACTTACGTTCATTGAAACACTCGTTAATCTGATGAGAGATGGCACT
CCAAAGAACAAGGAATGTTCAGTGGCGGTGCTTCATAGGTTAAGCATACACAATTCAAAT
CATATGCTCGCGGCACTTCAGTATGGTGTGTATGAGTATTTAGTAGAGATTGGTGAGAGT
GGGACTGATAGGGGACAACGAAAAGCTAAATCTATATTGCAGCATATGAGTAAAACAGAA
CAGATTCCTTGTCTATAA