Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075607
CDS Infomation

pacid=37447489 polypeptide=PGSC0003DMP400051212 locus=PGSC0003DMG400029405 ID=PGSC0003DMT400075607.v4.03 annot-version=v4.03
Sequence

ATGGAGCTGGCAGCAGTAGCTTCTGTGGTGGTAGAGAAACTAAAGATGTCTGACGAGATA
ACAGACAAAACGGTGATAGAGGAAGCCTTAATAAAAATGCAACGCGTCATTGCTGACACA
AACGAGGAGCAAAGAAATAGTGATGAATTTAAGAGTTGGGCTGAAAAGTGTCTGCGTAGT
CTGTACTATGTTGAGGACACTGTTGAGTCTTTTACCCTTGGTATCGCCCGTCAGAACAGG
AAATGGGGCTTTCTTATGAATCACTCTCTGGTTCCCAAGAACTTAATGCCTTGTCAAAAG
CTGAGAAGGAAGATTAAAAGAATCCCTTCAGACATTAAACGGGTGATCGATGAAAAGCCC
AAAGGTACTGACAAACAGCATGCCTGTAGCAATGGGACAACTACCAATATGGGTGATCAG
AATCGTGCAATGGCACAATGTAGTTATGCTACGATCCCAGAGAGTGATGAAGAGGAACTA
GTACTGGAGGTAGATAGAAAACCTCTGAGGTTAGACCGTGAAAAACAAGCAAAGCTCATG
TCTACAAATAAACCTCTGAGGTGCAGCAGCGACAAGTCTGTGAGGTTAGACCGTGAAACA
GAAGCCAGACTCATGTATACAAATTCTTATGCTGATGAAGAACTGGAGATGTTTGACATT
AGACAAGAAGTGCATGACTTAGTGAAAAGACTAATCAAGACAGCTGATAAAGGAAGGGCC
CGGATCGTTGAAATTGCTGGTGAGTTGGGTTCAGGCAAGACTACTTTGGCTCGTGCAGTA
TACGGAAGGAGGGAAATCAAAAAACATTTTAAGTCTGGATGTGCATGGGTCACCATTTCA
AAAGAGTCTAATAAATCAGATGTATTGCAGAACTTGCTAAAACAGCTGGGGGAATCCAAG
GACGCTGTGGATCTAGCTACCAATGAGCTGGAAACTAGACTTTTGAAGTGGTTAATTGGA
AAAAACTACTTGATTGTGTTGGATGATGTACAGAGTGATCAAATGTGGGAAGGACTGAAA
TCTGTTTTCTTAGACAATCGAAATGGAAGTATACTACTTCTCATCACCACCACTGTTAAT
CCGATGTATTGTGTCTCTCCTCCGAATAATATCCAAAAGAAAACGCTAACTGAAGAATAT
TGCTGGAACTTGTTCCTGAAGAAAGCTGGTTGGGCTACTTGGGAGGAAGGAAAGGAACGT
CAAGTTGTGAAGCAGCGAGTTCTTAATGTCTGTTGTGGTCTCCCCCTGAATACTGTCCTT
CTTGGCAGCATGTTGTCGACCGTGGGAGATGACATTCGCTTTGATTATCTTCAAAACATA
CTGCGCATAAACTGGAAAACGAAGGACATTGTATCCGTTAGCTATATGAATCTGCCTGAC
CATTTGAAACTGTGTGTACTCTACTTGGTGCTATTCCCTAAAGAGTACGACATTCCGGTA
AGGAGGCTGTTTCGTTTGTGGCTTTCAGAGGGTTTTGTAAACCCCAAAGAAGATAAATTC
CCAGAGGATGTGGTACAAGAAAACTTTGATAATCTAGTCAAGCGGAGCTTGATTCAGATA
TCCAAATTTAGGTCTGATGGCAGTCCCAGAAGATGTCGGTTACTAGGCGTTCTCCATGAC
TATCTGTTGCCTAAGGCCCAGAACATCAGGCTTTTCCATGTTCATTGCAGTGCATATAGC
ACAAAAGATTCATTTCCCTTGAATGTTAGAAGGCTTGTTGAGCATGCAAGCAGTAAGAAT
ATTTATAGTGATGCTTCCCGGTTTGAACATCTTCGCTCTTACTTATCATTCAATTTCCAG
AGGAAAGACACCCCAGCCACGGAAGTAGGCATCCTTCTAAGTCGCGTAATTACTAAGGGT
TTCGGATTGCTGAGGGTGCTTGACCTGGAAGGAGTGTATAAGCCAAGTTTACCTGAGAAT
CTTGGTGATTTATTTCACTTGAGATACTTAGGATTAAGATGGACTTTCTTGGATGCTCTT
CCCTCGTCCGTTGGTGACTTGCCATATCTTGAGACATTAGATGTGAAGCACACTAACATA
AATAACTTACCCACCTCCATGTGGAAATCAAAGAAATTGCGGCATCTCAATCTCAGTCAC
ATCCGTCTTGACATGCCAAAGCATTCAGATACCGATTCTTTGCCTACACTCCTTACACTG
TGGGGATTGTCTGTAGATGATGATAGCCCAGTGAAGAATGGACTGGATCGGTTGTGTAAT
CTTAGAGAGGCAGGCATTACTTTCTGTTTGAAGAATTGTGACCACCTTCTCAATTGGATT
TCAAAGTTAACTTCTATTCAATCTTTGAGGTTACGATCCATAAATGATGTAGGACATCCA
TCACATTTTGGTGACGAGCCGTTGTCTCTGTCAAGTCTGAGCAATCTTTCCCACCTAAAC
TTGCTAGGTGTATTACCAAATCTGCCTGAATACATGCCTCAAGGGCTTAAAGTAGTCACA
TTGTCTCTTTCAAAGCTGACAGAGGATCCTATGCCGATTCTTGGGAAGCTTGAACATCTT
AATGTCCTCAGGCTTCTATCAGATTCCTATATGGGGAAGGAAATGGTGTGCCCTCAGGAA
GGATTCAAAGAGCTTCGGGTTCTAAAGATTTGGAAACTTAAGAACTTGGAAAAGTGGAAT
GTGGAGGAAGCGGCAATGGAGAAGCTGAAAGAGATAAATATCCGATGCTGTAATAAACTG
ATGAGCATTCCCGAAAGACTCTGGAAAAAACCAAGTCTCAGGGAATTGATCATAACCAAC
ATGCCAGAAGAGTTCAAACAGAGTGTCATTACGTTCATGAGGTGTCAGGATTTGATTCTC
ACTTTCAAAGATTATGATTTAACCCCCTTGCCGTGGGAGGATGCTGATCATACTTCTGAT
GAAAGTCACACCAACGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400051212
PEP Infomation

pacid=37447489 transcript=PGSC0003DMT400075607 locus=PGSC0003DMG400029405 ID=PGSC0003DMT400075607.v4.03 annot-version=v4.03
Sequence

MELAAVASVVVEKLKMSDEITDKTVIEEALIKMQRVIADTNEEQRNSDEFKSWAEKCLRS
LYYVEDTVESFTLGIARQNRKWGFLMNHSLVPKNLMPCQKLRRKIKRIPSDIKRVIDEKP
KGTDKQHACSNGTTTNMGDQNRAMAQCSYATIPESDEEELVLEVDRKPLRLDREKQAKLM
STNKPLRCSSDKSVRLDRETEARLMYTNSYADEELEMFDIRQEVHDLVKRLIKTADKGRA
RIVEIAGELGSGKTTLARAVYGRREIKKHFKSGCAWVTISKESNKSDVLQNLLKQLGESK
DAVDLATNELETRLLKWLIGKNYLIVLDDVQSDQMWEGLKSVFLDNRNGSILLLITTTVN
PMYCVSPPNNIQKKTLTEEYCWNLFLKKAGWATWEEGKERQVVKQRVLNVCCGLPLNTVL
LGSMLSTVGDDIRFDYLQNILRINWKTKDIVSVSYMNLPDHLKLCVLYLVLFPKEYDIPV
RRLFRLWLSEGFVNPKEDKFPEDVVQENFDNLVKRSLIQISKFRSDGSPRRCRLLGVLHD
YLLPKAQNIRLFHVHCSAYSTKDSFPLNVRRLVEHASSKNIYSDASRFEHLRSYLSFNFQ
RKDTPATEVGILLSRVITKGFGLLRVLDLEGVYKPSLPENLGDLFHLRYLGLRWTFLDAL
PSSVGDLPYLETLDVKHTNINNLPTSMWKSKKLRHLNLSHIRLDMPKHSDTDSLPTLLTL
WGLSVDDDSPVKNGLDRLCNLREAGITFCLKNCDHLLNWISKLTSIQSLRLRSINDVGHP
SHFGDEPLSLSSLSNLSHLNLLGVLPNLPEYMPQGLKVVTLSLSKLTEDPMPILGKLEHL
NVLRLLSDSYMGKEMVCPQEGFKELRVLKIWKLKNLEKWNVEEAAMEKLKEINIRCCNKL
MSIPERLWKKPSLRELIITNMPEEFKQSVITFMRCQDLILTFKDYDLTPLPWEDADHTSD
ESHTNE*

Transcript Sequence

Transcript ID

PGSC0003DMT400075607
Transcript Infomation

pacid=37447489 locus=PGSC0003DMG400029405 ID=PGSC0003DMT400075607.v4.03 annot-version=v4.03
Sequence

ATGGAGCTGGCAGCAGTAGCTTCTGTGGTGGTAGAGAAACTAAAGATGTCTGACGAGATA
ACAGACAAAACGGTGATAGAGGAAGCCTTAATAAAAATGCAACGCGTCATTGCTGACACA
AACGAGGAGCAAAGAAATAGTGATGAATTTAAGAGTTGGGCTGAAAAGTGTCTGCGTAGT
CTGTACTATGTTGAGGACACTGTTGAGTCTTTTACCCTTGGTATCGCCCGTCAGAACAGG
AAATGGGGCTTTCTTATGAATCACTCTCTGGTTCCCAAGAACTTAATGCCTTGTCAAAAG
CTGAGAAGGAAGATTAAAAGAATCCCTTCAGACATTAAACGGGTGATCGATGAAAAGCCC
AAAGGTACTGACAAACAGCATGCCTGTAGCAATGGGACAACTACCAATATGGGTGATCAG
AATCGTGCAATGGCACAATGTAGTTATGCTACGATCCCAGAGAGTGATGAAGAGGAACTA
GTACTGGAGGTAGATAGAAAACCTCTGAGGTTAGACCGTGAAAAACAAGCAAAGCTCATG
TCTACAAATAAACCTCTGAGGTGCAGCAGCGACAAGTCTGTGAGGTTAGACCGTGAAACA
GAAGCCAGACTCATGTATACAAATTCTTATGCTGATGAAGAACTGGAGATGTTTGACATT
AGACAAGAAGTGCATGACTTAGTGAAAAGACTAATCAAGACAGCTGATAAAGGAAGGGCC
CGGATCGTTGAAATTGCTGGTGAGTTGGGTTCAGGCAAGACTACTTTGGCTCGTGCAGTA
TACGGAAGGAGGGAAATCAAAAAACATTTTAAGTCTGGATGTGCATGGGTCACCATTTCA
AAAGAGTCTAATAAATCAGATGTATTGCAGAACTTGCTAAAACAGCTGGGGGAATCCAAG
GACGCTGTGGATCTAGCTACCAATGAGCTGGAAACTAGACTTTTGAAGTGGTTAATTGGA
AAAAACTACTTGATTGTGTTGGATGATGTACAGAGTGATCAAATGTGGGAAGGACTGAAA
TCTGTTTTCTTAGACAATCGAAATGGAAGTATACTACTTCTCATCACCACCACTGTTAAT
CCGATGTATTGTGTCTCTCCTCCGAATAATATCCAAAAGAAAACGCTAACTGAAGAATAT
TGCTGGAACTTGTTCCTGAAGAAAGCTGGTTGGGCTACTTGGGAGGAAGGAAAGGAACGT
CAAGTTGTGAAGCAGCGAGTTCTTAATGTCTGTTGTGGTCTCCCCCTGAATACTGTCCTT
CTTGGCAGCATGTTGTCGACCGTGGGAGATGACATTCGCTTTGATTATCTTCAAAACATA
CTGCGCATAAACTGGAAAACGAAGGACATTGTATCCGTTAGCTATATGAATCTGCCTGAC
CATTTGAAACTGTGTGTACTCTACTTGGTGCTATTCCCTAAAGAGTACGACATTCCGGTA
AGGAGGCTGTTTCGTTTGTGGCTTTCAGAGGGTTTTGTAAACCCCAAAGAAGATAAATTC
CCAGAGGATGTGGTACAAGAAAACTTTGATAATCTAGTCAAGCGGAGCTTGATTCAGATA
TCCAAATTTAGGTCTGATGGCAGTCCCAGAAGATGTCGGTTACTAGGCGTTCTCCATGAC
TATCTGTTGCCTAAGGCCCAGAACATCAGGCTTTTCCATGTTCATTGCAGTGCATATAGC
ACAAAAGATTCATTTCCCTTGAATGTTAGAAGGCTTGTTGAGCATGCAAGCAGTAAGAAT
ATTTATAGTGATGCTTCCCGGTTTGAACATCTTCGCTCTTACTTATCATTCAATTTCCAG
AGGAAAGACACCCCAGCCACGGAAGTAGGCATCCTTCTAAGTCGCGTAATTACTAAGGGT
TTCGGATTGCTGAGGGTGCTTGACCTGGAAGGAGTGTATAAGCCAAGTTTACCTGAGAAT
CTTGGTGATTTATTTCACTTGAGATACTTAGGATTAAGATGGACTTTCTTGGATGCTCTT
CCCTCGTCCGTTGGTGACTTGCCATATCTTGAGACATTAGATGTGAAGCACACTAACATA
AATAACTTACCCACCTCCATGTGGAAATCAAAGAAATTGCGGCATCTCAATCTCAGTCAC
ATCCGTCTTGACATGCCAAAGCATTCAGATACCGATTCTTTGCCTACACTCCTTACACTG
TGGGGATTGTCTGTAGATGATGATAGCCCAGTGAAGAATGGACTGGATCGGTTGTGTAAT
CTTAGAGAGGCAGGCATTACTTTCTGTTTGAAGAATTGTGACCACCTTCTCAATTGGATT
TCAAAGTTAACTTCTATTCAATCTTTGAGGTTACGATCCATAAATGATGTAGGACATCCA
TCACATTTTGGTGACGAGCCGTTGTCTCTGTCAAGTCTGAGCAATCTTTCCCACCTAAAC
TTGCTAGGTGTATTACCAAATCTGCCTGAATACATGCCTCAAGGGCTTAAAGTAGTCACA
TTGTCTCTTTCAAAGCTGACAGAGGATCCTATGCCGATTCTTGGGAAGCTTGAACATCTT
AATGTCCTCAGGCTTCTATCAGATTCCTATATGGGGAAGGAAATGGTGTGCCCTCAGGAA
GGATTCAAAGAGCTTCGGGTTCTAAAGATTTGGAAACTTAAGAACTTGGAAAAGTGGAAT
GTGGAGGAAGCGGCAATGGAGAAGCTGAAAGAGATAAATATCCGATGCTGTAATAAACTG
ATGAGCATTCCCGAAAGACTCTGGAAAAAACCAAGTCTCAGGGAATTGATCATAACCAAC
ATGCCAGAAGAGTTCAAACAGAGTGTCATTACGTTCATGAGGTGTCAGGATTTGATTCTC
ACTTTCAAAGATTATGATTTAACCCCCTTGCCGTGGGAGGATGCTGATCATACTTCTGAT
GAAAGTCACACCAACGAGTAG