Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075600
CDS Infomation

pacid=37445757 polypeptide=PGSC0003DMP400051206 locus=PGSC0003DMG400029400 ID=PGSC0003DMT400075600.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAAAATTCTCATTTCTGGTCCTATTTCCCATTTTATTACTATCTCTCATGTCA
CGCGCAACATTTGCGCGTGACTTCTCAATCGTGGGATATTCCCCCGATGACTTGAATAGC
ATCGATAACATCATCAATCTCTTCGAGACGTGGATGGAGAAACACAACAAGATTTACAAG
AGCATTGAAGAGAAATTGCATAGATTTGAGATATTTAGAGATAATTTGAAACATATTGAT
GAGAGGAACAATATTGTTAGTAATTATTGGCTTGGTTTGAATGAATTTGCTGATTTAAGC
CATGATGAATTCAAGAAAATGTATTTAGGACTCAACGTTCAAAATGAAAAGAGATCAAAT
GATGAATTTATTTATAGTGATTTTGTGGATTTGCCCAAGTCTGTTGATTGGAGAAAAAAG
GGTGCTGTGACTGATGTCAAGAATCAAGGCTCATGTGGTAGTTGTTGGGCGTTTTCAACG
GTAGCGGCAGTAGAGGGAATAAACCAAATAAAAACAGGGAATTTGACATCTTTGTCTGAA
CAAGAGTTGATTGATTGTGACACAAAATACAATAGTGGTTGCAATGGTGGCCTTATGGAT
TATGCTTTTCAATTTATTGTTTCACAAGGTGGTCTTCACAAAGAGGATGACTATCCTTAC
CTCATGGAGGAAGGCACTTGTGATGAAAAAAGAGATGAAAGTGAAGTGGTGACAATAGAT
GGTTACCATGATGTACCTGCCAATGATGAACTAAGTCTCTTGAAAGCTCTTGCTAACCAA
CCTTTGAGTATTGCCATTGAGGCTTCTGGTAGAGATTTCCAATTCTACAAAGGGGGTGTG
TTTGATGGACATTGTGGAACAGCATTGGATCATGGAGTGGCAGCAGTTGGATATGGATCC
ACAAAGGGGTTGGATTACATCATTGTCAAGAATTCTTGGGGGGCAAAATGGGGAGAAAAA
GGTTTCATTAGGATGAAGAGAAATATTGGTAAAGCTGAAGGCCTTTGTGGAATCTACAAA
ATGGCTTCTTTCCCTACCAAAAATAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400051206
PEP Infomation

pacid=37445757 transcript=PGSC0003DMT400075600 locus=PGSC0003DMG400029400 ID=PGSC0003DMT400075600.v4.03 annot-version=v4.03
Sequence

MASKFSFLVLFPILLLSLMSRATFARDFSIVGYSPDDLNSIDNIINLFETWMEKHNKIYK
SIEEKLHRFEIFRDNLKHIDERNNIVSNYWLGLNEFADLSHDEFKKMYLGLNVQNEKRSN
DEFIYSDFVDLPKSVDWRKKGAVTDVKNQGSCGSCWAFSTVAAVEGINQIKTGNLTSLSE
QELIDCDTKYNSGCNGGLMDYAFQFIVSQGGLHKEDDYPYLMEEGTCDEKRDESEVVTID
GYHDVPANDELSLLKALANQPLSIAIEASGRDFQFYKGGVFDGHCGTALDHGVAAVGYGS
TKGLDYIIVKNSWGAKWGEKGFIRMKRNIGKAEGLCGIYKMASFPTKNK*

Transcript Sequence

Transcript ID

PGSC0003DMT400075600
Transcript Infomation

pacid=37445757 locus=PGSC0003DMG400029400 ID=PGSC0003DMT400075600.v4.03 annot-version=v4.03
Sequence

ATGGCTTCAAAATTCTCATTTCTGGTCCTATTTCCCATTTTATTACTATCTCTCATGTCA
CGCGCAACATTTGCGCGTGACTTCTCAATCGTGGGATATTCCCCCGATGACTTGAATAGC
ATCGATAACATCATCAATCTCTTCGAGACGTGGATGGAGAAACACAACAAGATTTACAAG
AGCATTGAAGAGAAATTGCATAGATTTGAGATATTTAGAGATAATTTGAAACATATTGAT
GAGAGGAACAATATTGTTAGTAATTATTGGCTTGGTTTGAATGAATTTGCTGATTTAAGC
CATGATGAATTCAAGAAAATGTATTTAGGACTCAACGTTCAAAATGAAAAGAGATCAAAT
GATGAATTTATTTATAGTGATTTTGTGGATTTGCCCAAGTCTGTTGATTGGAGAAAAAAG
GGTGCTGTGACTGATGTCAAGAATCAAGGCTCATGTGGTAGTTGTTGGGCGTTTTCAACG
GTAGCGGCAGTAGAGGGAATAAACCAAATAAAAACAGGGAATTTGACATCTTTGTCTGAA
CAAGAGTTGATTGATTGTGACACAAAATACAATAGTGGTTGCAATGGTGGCCTTATGGAT
TATGCTTTTCAATTTATTGTTTCACAAGGTGGTCTTCACAAAGAGGATGACTATCCTTAC
CTCATGGAGGAAGGCACTTGTGATGAAAAAAGAGATGAAAGTGAAGTGGTGACAATAGAT
GGTTACCATGATGTACCTGCCAATGATGAACTAAGTCTCTTGAAAGCTCTTGCTAACCAA
CCTTTGAGTATTGCCATTGAGGCTTCTGGTAGAGATTTCCAATTCTACAAAGGGGGTGTG
TTTGATGGACATTGTGGAACAGCATTGGATCATGGAGTGGCAGCAGTTGGATATGGATCC
ACAAAGGGGTTGGATTACATCATTGTCAAGAATTCTTGGGGGGCAAAATGGGGAGAAAAA
GGTTTCATTAGGATGAAGAGAAATATTGGTAAAGCTGAAGGCCTTTGTGGAATCTACAAA
ATGGCTTCTTTCCCTACCAAAAATAAGTGA