Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075590
CDS Infomation

pacid=37447334 polypeptide=PGSC0003DMP400051198 locus=PGSC0003DMG400029396 ID=PGSC0003DMT400075590.v4.03 annot-version=v4.03
Sequence

ATGGAGAATTTGTTGTGTGAAAAAGGTGAAATGATCGAACAGACTTTGCTATTAGATGAT
TCTGAAACTCAAAAGGGTGGATTCAGAACTTTACCTTTCATACTTGGAAATGCGGCTTTG
ACAAATGCAGCGACGTCTGCTCTAACTCCTAACATGATCCTGTATTTGATGAATGAATAT
CACATGGATATGACTACTGGGTCCAATATTATCTACATGTGGTCAGCAGTTACCAATATC
GCTCCAGTTGTTGGGGCGTTTATGGCGGATTCTTTTGTGGGTCGGTTCCAGATGATAGGA
TTGGGATCTGTTGTCACCCTTGTGGGGATGTTTATGTTTTGGCTGACATCAGTGATTCCG
CAAGCAAGGCCCCCGCCCTGTGTCAATTCCAACAACATTTGCAGATCAGCAGAGATGTTC
CAACTCTTCTTCCTGTGTTTCTCTTTGGGCATCGTTGCCATTGGAGCAGGTGCAGTCAAA
TCCTCATCTTTAGCATTTGGTTCTGATCAGTTGAAACGGGAAGTATATCAAGATAATGCG
CGTTTAATGGAGAGATACTTCAGCTGGTACTATGCCTCGTATGCTTTGTCTATCCTGGTT
GCTCTCACGTGTCTTGTTTATATCCAAGTCAACATGGGGTGGGCTTTAGGTTTTGGAGCT
CCTGTTTTGCTAATGTTGTTTTCAACTCTTCTAATTTATTTGGGTACTCCATTCTATGTG
AAGCTGAAGCCTAAATCGAGCTTAATCACTGGCCTTTTTCAAGTGATTGTAGCCTCTTAT
AGAAATAGATGTCTCAAATTGTCGTCACAGAGTGAAGATATACAATATCATCAGAAAAAA
GGGTCAACCGTAGTTCTTCCAAGTGAAAAACTAAGGTTTTTGAATAAAGCTTGCATTGTA
CAAGATCCTCGACTAGATTTGAGCCCAGATGGAGAAGCAATAGATCCCTGGCGTCTTTGC
ACTGTAGATCAAGTAGAGGAGCTGAAAGCATTGCTCAAAGTTGTTCCAATCTGGTTGACG
GGAGTTGTATTGTCCATAAACATAAGCCAGAACACTTTTCCTGTACTTCAAGCGAATACC
ATGGATCGACATATTGGTTCAAGCTTTGAAATCCCAGCTGCCTCCTTTGGCATATTTGCT
GTCATCTCTGCTATACTTTGGATTGTCCTCTACGATTATCTGATTCTTCCCATTGCATCA
AAAATGACTGGAAAGCCTGCTCATTTCAGCACAAAAGAGAGAATGGGGTTCGGGTTGTTT
CTTTCCTTCCTGTCAGTTTTAGTGGTTGCAGTTGTAGAAGGTGTACGGAGAAGTATCGCA
ATCAAGGAGGGGTACTTGGATGATCCAGAAGGTGTGATCCCTATGTCAGCTATGTGGCTA
CTTCCCCAGAATTCCCTTACTGGCTTCGCAGAGGCCCTGCATGCCATCGGCCAAAACGAA
TTCTACATTTCAGAATTTCCTAGAAGCATGTCTAGTGTAGCTGCTTCTCTATTAGGAGTT
GGTATGGGAGTTGGAAGCTTACTAGCTAGCTCTATAATGAGTACTATCGACGACCTGACT
AAAAGAGGAGGGGAAGAAAGTTGGGTATCGAGCAATATAAACAAGGGCCATTACGACTAC
TATTATCTCGTTCTTGCAGGATTTAGTCTGGTTAACATACTGTGCTATATTGTTTGTAGT
AAAGCTTATGGTCCATGCAAAGAAGAGGTGATGGAAGAAGAGAAGCCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400051198
PEP Infomation

pacid=37447334 transcript=PGSC0003DMT400075590 locus=PGSC0003DMG400029396 ID=PGSC0003DMT400075590.v4.03 annot-version=v4.03
Sequence

MENLLCEKGEMIEQTLLLDDSETQKGGFRTLPFILGNAALTNAATSALTPNMILYLMNEY
HMDMTTGSNIIYMWSAVTNIAPVVGAFMADSFVGRFQMIGLGSVVTLVGMFMFWLTSVIP
QARPPPCVNSNNICRSAEMFQLFFLCFSLGIVAIGAGAVKSSSLAFGSDQLKREVYQDNA
RLMERYFSWYYASYALSILVALTCLVYIQVNMGWALGFGAPVLLMLFSTLLIYLGTPFYV
KLKPKSSLITGLFQVIVASYRNRCLKLSSQSEDIQYHQKKGSTVVLPSEKLRFLNKACIV
QDPRLDLSPDGEAIDPWRLCTVDQVEELKALLKVVPIWLTGVVLSINISQNTFPVLQANT
MDRHIGSSFEIPAASFGIFAVISAILWIVLYDYLILPIASKMTGKPAHFSTKERMGFGLF
LSFLSVLVVAVVEGVRRSIAIKEGYLDDPEGVIPMSAMWLLPQNSLTGFAEALHAIGQNE
FYISEFPRSMSSVAASLLGVGMGVGSLLASSIMSTIDDLTKRGGEESWVSSNINKGHYDY
YYLVLAGFSLVNILCYIVCSKAYGPCKEEVMEEEKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400075590
Transcript Infomation

pacid=37447334 locus=PGSC0003DMG400029396 ID=PGSC0003DMT400075590.v4.03 annot-version=v4.03
Sequence

ATGGAGAATTTGTTGTGTGAAAAAGGTGAAATGATCGAACAGACTTTGCTATTAGATGAT
TCTGAAACTCAAAAGGGTGGATTCAGAACTTTACCTTTCATACTTGGAAATGCGGCTTTG
ACAAATGCAGCGACGTCTGCTCTAACTCCTAACATGATCCTGTATTTGATGAATGAATAT
CACATGGATATGACTACTGGGTCCAATATTATCTACATGTGGTCAGCAGTTACCAATATC
GCTCCAGTTGTTGGGGCGTTTATGGCGGATTCTTTTGTGGGTCGGTTCCAGATGATAGGA
TTGGGATCTGTTGTCACCCTTGTGGGGATGTTTATGTTTTGGCTGACATCAGTGATTCCG
CAAGCAAGGCCCCCGCCCTGTGTCAATTCCAACAACATTTGCAGATCAGCAGAGATGTTC
CAACTCTTCTTCCTGTGTTTCTCTTTGGGCATCGTTGCCATTGGAGCAGGTGCAGTCAAA
TCCTCATCTTTAGCATTTGGTTCTGATCAGTTGAAACGGGAAGTATATCAAGATAATGCG
CGTTTAATGGAGAGATACTTCAGCTGGTACTATGCCTCGTATGCTTTGTCTATCCTGGTT
GCTCTCACGTGTCTTGTTTATATCCAAGTCAACATGGGGTGGGCTTTAGGTTTTGGAGCT
CCTGTTTTGCTAATGTTGTTTTCAACTCTTCTAATTTATTTGGGTACTCCATTCTATGTG
AAGCTGAAGCCTAAATCGAGCTTAATCACTGGCCTTTTTCAAGTGATTGTAGCCTCTTAT
AGAAATAGATGTCTCAAATTGTCGTCACAGAGTGAAGATATACAATATCATCAGAAAAAA
GGGTCAACCGTAGTTCTTCCAAGTGAAAAACTAAGGTTTTTGAATAAAGCTTGCATTGTA
CAAGATCCTCGACTAGATTTGAGCCCAGATGGAGAAGCAATAGATCCCTGGCGTCTTTGC
ACTGTAGATCAAGTAGAGGAGCTGAAAGCATTGCTCAAAGTTGTTCCAATCTGGTTGACG
GGAGTTGTATTGTCCATAAACATAAGCCAGAACACTTTTCCTGTACTTCAAGCGAATACC
ATGGATCGACATATTGGTTCAAGCTTTGAAATCCCAGCTGCCTCCTTTGGCATATTTGCT
GTCATCTCTGCTATACTTTGGATTGTCCTCTACGATTATCTGATTCTTCCCATTGCATCA
AAAATGACTGGAAAGCCTGCTCATTTCAGCACAAAAGAGAGAATGGGGTTCGGGTTGTTT
CTTTCCTTCCTGTCAGTTTTAGTGGTTGCAGTTGTAGAAGGTGTACGGAGAAGTATCGCA
ATCAAGGAGGGGTACTTGGATGATCCAGAAGGTGTGATCCCTATGTCAGCTATGTGGCTA
CTTCCCCAGAATTCCCTTACTGGCTTCGCAGAGGCCCTGCATGCCATCGGCCAAAACGAA
TTCTACATTTCAGAATTTCCTAGAAGCATGTCTAGTGTAGCTGCTTCTCTATTAGGAGTT
GGTATGGGAGTTGGAAGCTTACTAGCTAGCTCTATAATGAGTACTATCGACGACCTGACT
AAAAGAGGAGGGGAAGAAAGTTGGGTATCGAGCAATATAAACAAGGGCCATTACGACTAC
TATTATCTCGTTCTTGCAGGATTTAGTCTGGTTAACATACTGTGCTATATTGTTTGTAGT
AAAGCTTATGGTCCATGCAAAGAAGAGGTGATGGAAGAAGAGAAGCCATGA