Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075461
CDS Infomation

pacid=37448527 polypeptide=PGSC0003DMP400051107 locus=PGSC0003DMG400029349 ID=PGSC0003DMT400075461.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAAAAAACAACAAATCTCATGTTTTAGTTCTTCCATTCCCAGTACAAGGTCAC
ATAAACCCAATGGTTCAATTTTCCAAAAGATTAACAGCAAAAGAATCAGTTAAAGTGACC
TTAATCACCATAGACTCTGTTACCAAATCTATGCCAATATTAGAATCTGGTTCAATCAAG
ATTCACTCTATTCCACATAATGATGAAACCCCACCACAAAGTTATGATCTTTTTCTTGAA
TGGTTTCATGTTTTGGTGTCAAAAAATTTGACAAAAATTGTTGAGGAATTGTCTGATTCT
GAGTATCCTGTGAAGGTTCTTGTTTTCGATTCGATAACAACATGGGCAATTGATTTGACA
CATGAATTAGGGTTAAAAGGGGCTGCTTTTTTTACACAATCTTGTGCTCTTAGTGTTGTA
TATTATCATATGGATCCAGAAAAAAATAAAGTTTGTGTTTTTGATGATAGTGTGTGTTTG
CCTTCACTTCCATTGTTGCAAAAACAAGATTTGCCTTCTTTTGTGTGTCAAAGTGATTTG
TATCCATCTCTTAGGAAACTTGTGTTCAGCAGGAATATCAATTTCAAGAAAGCAGATTGG
CTTTTGTTCAACTCATTTGATGTGTTGGAGAAGGAGGTGATCGACTGGCTAAGGACACAA
TGTCGAATCAAAACCATCGGTCCAATTATTCCATCAATGTATCTTGACAAGCGACTGAAA
GATGACAAAGAATACGGTTTGAGTCTCTTCAAACCTAACAGTGAAACTTGTATGAAGTGG
CTAGACTCGAGGGAAATTGGCTCTGTTGTTTATGTATCATTCGGAAGTTTAGCCAATCTT
GGCGAACAACAAATGGAAGAACTAGCTTCAGGATTGATGATGAGTGATTTCAACTTCTTG
TGGGTTGTTAGAGCTACTGAAGAGAACAAACTTACAGAGGAATTCATGTCCAAGTCGAAA
AAGAAATGTCTAATAGTGAATTGGTGCCCTCAACTCGACGTGTTGTCACATCAAGCAGTT
GGATGTTTCTTTACTCATTGTGGATGGAATTCGACTCTAGAGGCATTGAGTTTGGGAGTG
CCAATGGTGGCCATGCCCCAATGGTCTGATCAACCAACTAACGCGAAATTTATTAGTGAT
GTATGGCAAACAGGAGTTCGCGTTAAGGCTGGAGAAAATGGTGTAGTGAATAGAGACGAA
ATCGCGAGTTCCATAAGGGAAGTCATGAGGGAAGAGAAAGGTATAATGCTTAAAGAGAAT
GCAAATAAATGGAAAAAATTGGCTAAGGAAGCAGTAGATGAAGGAGGAAGTTCAGACAAG
AATATTGAAGAATTTCTCAAACTTGTAATAAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400051107
PEP Infomation

pacid=37448527 transcript=PGSC0003DMT400075461 locus=PGSC0003DMG400029349 ID=PGSC0003DMT400075461.v4.03 annot-version=v4.03
Sequence

MEEKNNKSHVLVLPFPVQGHINPMVQFSKRLTAKESVKVTLITIDSVTKSMPILESGSIK
IHSIPHNDETPPQSYDLFLEWFHVLVSKNLTKIVEELSDSEYPVKVLVFDSITTWAIDLT
HELGLKGAAFFTQSCALSVVYYHMDPEKNKVCVFDDSVCLPSLPLLQKQDLPSFVCQSDL
YPSLRKLVFSRNINFKKADWLLFNSFDVLEKEVIDWLRTQCRIKTIGPIIPSMYLDKRLK
DDKEYGLSLFKPNSETCMKWLDSREIGSVVYVSFGSLANLGEQQMEELASGLMMSDFNFL
WVVRATEENKLTEEFMSKSKKKCLIVNWCPQLDVLSHQAVGCFFTHCGWNSTLEALSLGV
PMVAMPQWSDQPTNAKFISDVWQTGVRVKAGENGVVNRDEIASSIREVMREEKGIMLKEN
ANKWKKLAKEAVDEGGSSDKNIEEFLKLVIN*

Transcript Sequence

Transcript ID

PGSC0003DMT400075461
Transcript Infomation

pacid=37448527 locus=PGSC0003DMG400029349 ID=PGSC0003DMT400075461.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAAAAAACAACAAATCTCATGTTTTAGTTCTTCCATTCCCAGTACAAGGTCAC
ATAAACCCAATGGTTCAATTTTCCAAAAGATTAACAGCAAAAGAATCAGTTAAAGTGACC
TTAATCACCATAGACTCTGTTACCAAATCTATGCCAATATTAGAATCTGGTTCAATCAAG
ATTCACTCTATTCCACATAATGATGAAACCCCACCACAAAGTTATGATCTTTTTCTTGAA
TGGTTTCATGTTTTGGTGTCAAAAAATTTGACAAAAATTGTTGAGGAATTGTCTGATTCT
GAGTATCCTGTGAAGGTTCTTGTTTTCGATTCGATAACAACATGGGCAATTGATTTGACA
CATGAATTAGGGTTAAAAGGGGCTGCTTTTTTTACACAATCTTGTGCTCTTAGTGTTGTA
TATTATCATATGGATCCAGAAAAAAATAAAGTTTGTGTTTTTGATGATAGTGTGTGTTTG
CCTTCACTTCCATTGTTGCAAAAACAAGATTTGCCTTCTTTTGTGTGTCAAAGTGATTTG
TATCCATCTCTTAGGAAACTTGTGTTCAGCAGGAATATCAATTTCAAGAAAGCAGATTGG
CTTTTGTTCAACTCATTTGATGTGTTGGAGAAGGAGGTGATCGACTGGCTAAGGACACAA
TGTCGAATCAAAACCATCGGTCCAATTATTCCATCAATGTATCTTGACAAGCGACTGAAA
GATGACAAAGAATACGGTTTGAGTCTCTTCAAACCTAACAGTGAAACTTGTATGAAGTGG
CTAGACTCGAGGGAAATTGGCTCTGTTGTTTATGTATCATTCGGAAGTTTAGCCAATCTT
GGCGAACAACAAATGGAAGAACTAGCTTCAGGATTGATGATGAGTGATTTCAACTTCTTG
TGGGTTGTTAGAGCTACTGAAGAGAACAAACTTACAGAGGAATTCATGTCCAAGTCGAAA
AAGAAATGTCTAATAGTGAATTGGTGCCCTCAACTCGACGTGTTGTCACATCAAGCAGTT
GGATGTTTCTTTACTCATTGTGGATGGAATTCGACTCTAGAGGCATTGAGTTTGGGAGTG
CCAATGGTGGCCATGCCCCAATGGTCTGATCAACCAACTAACGCGAAATTTATTAGTGAT
GTATGGCAAACAGGAGTTCGCGTTAAGGCTGGAGAAAATGGTGTAGTGAATAGAGACGAA
ATCGCGAGTTCCATAAGGGAAGTCATGAGGGAAGAGAAAGGTATAATGCTTAAAGAGAAT
GCAAATAAATGGAAAAAATTGGCTAAGGAAGCAGTAGATGAAGGAGGAAGTTCAGACAAG
AATATTGAAGAATTTCTCAAACTTGTAATAAACTAG