Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075458
CDS Infomation

pacid=37446487 polypeptide=PGSC0003DMP400051104 locus=PGSC0003DMG400029347 ID=PGSC0003DMT400075458.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCCATCACAAAACACAAAAACTAGTCTTGTCCATGTCTTTGTTATCTCATTT
TTGGGTCAAGGCAATGTTAACCCTTTTCTCAGACTAGCGAAACGCCTTGCTAGCAAGGGC
ATGTTGGTTACTTTCTCTGCACCCGAGCTCGTTGGCAAAGAGATGAGAGCTGCCGATGTG
AACTTGATCATCGATCAACCAACTCCTTACGGAGATGGTATGATCAGGTTTGAATTCTTC
GAGGATGGATCCTCGAATCAATCCATTACTGAGGATTTTGACTTGAGGATGAAAATGCTT
GAGCAAGCCGGACGAAGGAACTTGACTAAAATCCTGAAGAAACAGGATGACGAAGGTCGT
CCTGTTTCTTGTATAGTCAACAATCCATTTTTTCCATGGGTATGTGAAATTGCTGAGAGT
CTTGGAATACCTAACGCGTTGCTTTGGATTCAATCGTGTGCTTGCTTTTCGATATATTAC
CATTATAATTTCAATCTAGTGCCTTTTCCAAGTGAATTAGAACCTGAAAAGGACGTAGTC
CTACCTAGTATGCCTGTTTTGAAATACGATGATCTGCCTACGTTCTTACTCCATTCAAGT
GGCTTCGAATTAGTGTTGAAACGGACTATGTTGAATCAATTCAACATTTTGTCCAAACCT
TTTTGCATTTTGGTGGACTCATTCCAAGAACTTGAACATGAGGTGGTAAGGCATATGTCG
AAAATTTGCCCCATTAGAACTATTGGTCCCTTGTTATTCAATGACCCTAAAATCATTAGC
CCCATTCGCGGTGATTGCACAAAAATCGAGGAGGATTGCATCGAGTGGCTTGACTCGAGG
CCAATATCTTCAGTTGTTTACATTTCATTTGGTAGTGTTGCTGTTCCTGATCAAGAACAA
ACAGATGAGATCGCGTTTGGACTGTTAAATTCGGGGATATCTTTCTTATGGGTCATGAAG
CCACCCCCTGCCTATTCTGTTTTTCAGCCTGTTGTGTTACCTGATGGGTTTCTTTTGAAA
GTCGGTGGAAGGGGGAAAATAGTGACATGGTGTCCACAAGAACAAGTCTTGTCTCACCCA
TCTGTCTCCTTTTTTCTCACACATTGTGGATGGAATTCGTCGATGGAGGCAATTTCAAGT
GGCGTCCCCATCATGGCTTACCCTCAATGGGGTGATCAAGCCACGAACGCGAAGTATTTG
GTTGATGTATTCAAAATGGGGATTAGATTAAGCAGAGGTGAGAATGGGAGTAAGATAATT
ACAAGGGAGGAGATCGAGAAATGCTTGCGTGAAGCCACTAGTGATGATTTGAAGGTAGCA
GAGATGAAAGAAAATGCGCGCAAGTGGAAGAAACAAGCAGAGGAAGCAGTGGCAGAGCGC
GGCTCCTCTGCTATCAATATCCAAGCATTTGTGGATGAGTTGAAAAATATCCATGCCAAG
AAACAAGAAGAAAACGCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400051104
PEP Infomation

pacid=37446487 transcript=PGSC0003DMT400075458 locus=PGSC0003DMG400029347 ID=PGSC0003DMT400075458.v4.03 annot-version=v4.03
Sequence

MASPSQNTKTSLVHVFVISFLGQGNVNPFLRLAKRLASKGMLVTFSAPELVGKEMRAADV
NLIIDQPTPYGDGMIRFEFFEDGSSNQSITEDFDLRMKMLEQAGRRNLTKILKKQDDEGR
PVSCIVNNPFFPWVCEIAESLGIPNALLWIQSCACFSIYYHYNFNLVPFPSELEPEKDVV
LPSMPVLKYDDLPTFLLHSSGFELVLKRTMLNQFNILSKPFCILVDSFQELEHEVVRHMS
KICPIRTIGPLLFNDPKIISPIRGDCTKIEEDCIEWLDSRPISSVVYISFGSVAVPDQEQ
TDEIAFGLLNSGISFLWVMKPPPAYSVFQPVVLPDGFLLKVGGRGKIVTWCPQEQVLSHP
SVSFFLTHCGWNSSMEAISSGVPIMAYPQWGDQATNAKYLVDVFKMGIRLSRGENGSKII
TREEIEKCLREATSDDLKVAEMKENARKWKKQAEEAVAERGSSAINIQAFVDELKNIHAK
KQEENA*

Transcript Sequence

Transcript ID

PGSC0003DMT400075458
Transcript Infomation

pacid=37446487 locus=PGSC0003DMG400029347 ID=PGSC0003DMT400075458.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTCCATCACAAAACACAAAAACTAGTCTTGTCCATGTCTTTGTTATCTCATTT
TTGGGTCAAGGCAATGTTAACCCTTTTCTCAGACTAGCGAAACGCCTTGCTAGCAAGGGC
ATGTTGGTTACTTTCTCTGCACCCGAGCTCGTTGGCAAAGAGATGAGAGCTGCCGATGTG
AACTTGATCATCGATCAACCAACTCCTTACGGAGATGGTATGATCAGGTTTGAATTCTTC
GAGGATGGATCCTCGAATCAATCCATTACTGAGGATTTTGACTTGAGGATGAAAATGCTT
GAGCAAGCCGGACGAAGGAACTTGACTAAAATCCTGAAGAAACAGGATGACGAAGGTCGT
CCTGTTTCTTGTATAGTCAACAATCCATTTTTTCCATGGGTATGTGAAATTGCTGAGAGT
CTTGGAATACCTAACGCGTTGCTTTGGATTCAATCGTGTGCTTGCTTTTCGATATATTAC
CATTATAATTTCAATCTAGTGCCTTTTCCAAGTGAATTAGAACCTGAAAAGGACGTAGTC
CTACCTAGTATGCCTGTTTTGAAATACGATGATCTGCCTACGTTCTTACTCCATTCAAGT
GGCTTCGAATTAGTGTTGAAACGGACTATGTTGAATCAATTCAACATTTTGTCCAAACCT
TTTTGCATTTTGGTGGACTCATTCCAAGAACTTGAACATGAGGTGGTAAGGCATATGTCG
AAAATTTGCCCCATTAGAACTATTGGTCCCTTGTTATTCAATGACCCTAAAATCATTAGC
CCCATTCGCGGTGATTGCACAAAAATCGAGGAGGATTGCATCGAGTGGCTTGACTCGAGG
CCAATATCTTCAGTTGTTTACATTTCATTTGGTAGTGTTGCTGTTCCTGATCAAGAACAA
ACAGATGAGATCGCGTTTGGACTGTTAAATTCGGGGATATCTTTCTTATGGGTCATGAAG
CCACCCCCTGCCTATTCTGTTTTTCAGCCTGTTGTGTTACCTGATGGGTTTCTTTTGAAA
GTCGGTGGAAGGGGGAAAATAGTGACATGGTGTCCACAAGAACAAGTCTTGTCTCACCCA
TCTGTCTCCTTTTTTCTCACACATTGTGGATGGAATTCGTCGATGGAGGCAATTTCAAGT
GGCGTCCCCATCATGGCTTACCCTCAATGGGGTGATCAAGCCACGAACGCGAAGTATTTG
GTTGATGTATTCAAAATGGGGATTAGATTAAGCAGAGGTGAGAATGGGAGTAAGATAATT
ACAAGGGAGGAGATCGAGAAATGCTTGCGTGAAGCCACTAGTGATGATTTGAAGGTAGCA
GAGATGAAAGAAAATGCGCGCAAGTGGAAGAAACAAGCAGAGGAAGCAGTGGCAGAGCGC
GGCTCCTCTGCTATCAATATCCAAGCATTTGTGGATGAGTTGAAAAATATCCATGCCAAG
AAACAAGAAGAAAACGCCTAG