Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075424
CDS Infomation

pacid=37449269 polypeptide=PGSC0003DMP400051080 locus=PGSC0003DMG400029336 ID=PGSC0003DMT400075424.v4.03 annot-version=v4.03
Sequence

ATGAAACTCGAGGACTTCTTTACCTTGACTGAGATGAGTAATGGGCTCACAACTCCTTCT
CGAGTCCAGGATCTAGTCTCCATAATGCAGAAGGAAAGAGAGTGTGATGTCAAGAATGCT
GGTGAAACAACAAAGCAGTGGTCTGCTGTTGCAAGCACGATAGCTGCAACTGAGAATAAA
GAATGTCTTGAACTCTTTATCCAGCTAGATGGACTCAGCTTTATTCAGAGTTGGTTACGG
GATGCTCTAAGATTTGGAAATGAGACAGGTGAGTACTTTGTAGATGAATCAATTAGTCAT
TTGATTGATCTTTTACTGCGAGCTGTTGAAAGGCTGCATGTAGATGATAAGAAGTCTGTA
TCTTCTGGAATCTGGCTGACTGTGAAGAGCCTCCTTGGCCACAATAATTCTAAGGTGCAA
GAGAGGGCTAAGACATTATTTGATAGTTGGAATAAAGGGAAAGACGACTGTATGGTTTCA
GTGGGTATTGAAAAAGTACAAGCATCTATTGATGATAAAACAAGAGATACTGCGAATCTC
GTTGGGGAAAATGGGCTGTCTGAACCGTCGTCTGTGGAAGGAGGTTCTGGAGAAGAAAAG
ACCAAGGAACATGTTGGCAATAGTAAGATACTGTCTTCAAGGTCTGATATCCATCAATCT
AGGGTTGGAGATACCGCAACATCCGACCAAAATTTAGAGCATACACACATGAAGGATGCG
TTTCCAGGCTCTTCTTTGTCAAATTCGGTTACTGAAGGTCACAAGGTTGAACACCCGACA
CATCAGGCAGAGTGTGCCACCAATGCTATTGATACGTCAAATACGTGCACTTCTATAGTA
TTGAGACCTGGTCCTGCTGATGAACAGACAGATGTTCCTGTTTCAGATTCAATTAATCAC
TTAAGTCACATTAAAGAAGTCGGAAGTTCTGAGAAATTCAACTCCGCAGTGTCTAAATCA
TTGGAAGACAGAACTATTTCTTTAGTTACTGATATCAGAGAAGCTTTGGATGCTATTGCT
GGATCAGATTTACAAAAACAAACTGATGTCTACAACGAAAAGAGTTGTAGCGGAAATTCT
ACTTTTGGTGATGTCTCAGTGGCTGTTCCCGAGGGAAAGACACCGGTGGATGATAGCAGA
CCTGAAAATCATGGCAGCAGCAAGATAGTGCTTGAAGCTACAGAAAACAGAAAGTGCAAC
AATGACATATTGCAGGACTCCGACAAGCATAATCTGGAACATCCCGTAGATTCTGTTGTT
GATCAGGCTGACAAACACACTAGCGACAACAGTGAGGACAAACACACTAGTGACAACAGT
GAGGATGATATGGAAAATGAAAGTGAATTTCAAGAAGCAGGAAAAGGAGGTAGAGACCAT
GGTGTGTTTGGCAAGAAAAGTGATATTGATTTTGACTATGGCATCATGGATCCTTTAGAA
TTAGCTAGACAAGTTGCAATAGAAGTGGAGAGGGAAGTTCAGAGTTGCAGTTCTTCTGAG
AAAATAGAGGAGAGTAAAGTTCATGAGCCTGGTAGCCCAGATTCTAGTAGTGCAAAACAA
CGCCAAAAAAGGTTCGAGTGCTCTAACAAGGAAGTATCAAGAGGAATGGCTCCTTCGACT
GAAGCTTCACTTGCAAACTCAGAAGCTAGACCAATCAATGGAACTGTGAAGGTGGAATCT
TCTCAGGTTGTTGATGCCACTTTGGATCTTGAAACCAACGTCGACAAAGTTCTGTGCACT
TTTGATCTGAATCTAGAGGTTTGCTCAGATGATATAGATTGCCCAGGAAATCCAATCTCC
AGTTCTGTCTCTGTTGTTTCTGCTTCAAGGGCTGCAGCTGCCTCTGGAGTACCTGCTACT
CCCTTACAGTTTGAAGGAACTCTTGGATGGAAAGGATCCGCTGCAACAAGTGCTTTTCGG
CCTGCATCACCTCGCCGGATTCCTGGAGGTGAGAAGGCTGTTTCCTCTGGCGGGAATGCC
AGCAGCTCAAAGCAAATGCAATGTTTCCATGATATTGATCTGAATGTATCTGAAGGTGGA
GATGATAGGGTTGCAGACCTTTTTCCTGAAAAGAAAGTTTCACTATCATCTGCTCTTCCT
CTAGGGAAATCTTCTCGTGAAGCCAGTCCAAGAAAATCGGAAATGTTAGAGTGGGATCTT
AACTGTGCAAGTGAGGAGGGTGAGGCACCATCTGATTGGCGGATGGAGGGATCACTCTTG
TCTCTGAGGAATGGTCATCCGAGCCAGTCACCTTCATCATCATCATCATCAAAGCAGCCT
TCATTAAGGAACTTTGATCTAAATGACCAGTCATCTTTTCTCAATGATTTCTCAAATCTG
AACAACTTCAAGAAACCACCTCAGAATTCTAATGCATCTGGTGGAATAAAATCAGGTGAT
ACTGTTGTGTCCATCATGGGCGTGAAGGTAGAGGTCAACCGTAAAGATTATGCTGCTCAG
TCTTTTCCTTTTCCAAATGGTAGGGTAGCGGAAAACGCTGTTGAGCATAATGTTGCAAGA
GGTGGAGGAGTTTTAGGAATGGGATCTCCATTTCAATATACCCCTCTTCCTGCTTTTGGT
TACAGTGGCATTGCTCCAGTTCCTCCCATGGCTTTCTCCTCATCAATGTATGGACCCAGT
GGTCATATTCCTTACATGGTGGATTCCAGGGGGGCTCCTGTTGTACCTCAAATTGGCGGA
TCTGCTTCAGCAATACCACCATCTTTCTCCCAACAATCATTCATTTTAAACATGGGAAGT
GCACCTGTTCCCAACGGAGTTTGGCCATCACGAAGTGGTCTGGATCTCGACACTGGCTTA
GTACTTGATCGTGGGAATAAAGACACCGGAGGTCTGAGGCAGCTTTTTGATCAAGGACAA
GCTAGAACGATGGATGAACACTTCAGGATGAACATGCAACCCTCAACCAGTTTGAGTATC
GGTGGGAAACGCAAAGAACCAGATGATGGCTGGGAACCTTCCCCTTTCAAACATCATCCA
CCACCATGGAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400051080
PEP Infomation

pacid=37449269 transcript=PGSC0003DMT400075424 locus=PGSC0003DMG400029336 ID=PGSC0003DMT400075424.v4.03 annot-version=v4.03
Sequence

MKLEDFFTLTEMSNGLTTPSRVQDLVSIMQKERECDVKNAGETTKQWSAVASTIAATENK
ECLELFIQLDGLSFIQSWLRDALRFGNETGEYFVDESISHLIDLLLRAVERLHVDDKKSV
SSGIWLTVKSLLGHNNSKVQERAKTLFDSWNKGKDDCMVSVGIEKVQASIDDKTRDTANL
VGENGLSEPSSVEGGSGEEKTKEHVGNSKILSSRSDIHQSRVGDTATSDQNLEHTHMKDA
FPGSSLSNSVTEGHKVEHPTHQAECATNAIDTSNTCTSIVLRPGPADEQTDVPVSDSINH
LSHIKEVGSSEKFNSAVSKSLEDRTISLVTDIREALDAIAGSDLQKQTDVYNEKSCSGNS
TFGDVSVAVPEGKTPVDDSRPENHGSSKIVLEATENRKCNNDILQDSDKHNLEHPVDSVV
DQADKHTSDNSEDKHTSDNSEDDMENESEFQEAGKGGRDHGVFGKKSDIDFDYGIMDPLE
LARQVAIEVEREVQSCSSSEKIEESKVHEPGSPDSSSAKQRQKRFECSNKEVSRGMAPST
EASLANSEARPINGTVKVESSQVVDATLDLETNVDKVLCTFDLNLEVCSDDIDCPGNPIS
SSVSVVSASRAAAASGVPATPLQFEGTLGWKGSAATSAFRPASPRRIPGGEKAVSSGGNA
SSSKQMQCFHDIDLNVSEGGDDRVADLFPEKKVSLSSALPLGKSSREASPRKSEMLEWDL
NCASEEGEAPSDWRMEGSLLSLRNGHPSQSPSSSSSSKQPSLRNFDLNDQSSFLNDFSNL
NNFKKPPQNSNASGGIKSGDTVVSIMGVKVEVNRKDYAAQSFPFPNGRVAENAVEHNVAR
GGGVLGMGSPFQYTPLPAFGYSGIAPVPPMAFSSSMYGPSGHIPYMVDSRGAPVVPQIGG
SASAIPPSFSQQSFILNMGSAPVPNGVWPSRSGLDLDTGLVLDRGNKDTGGLRQLFDQGQ
ARTMDEHFRMNMQPSTSLSIGGKRKEPDDGWEPSPFKHHPPPWK*

Transcript Sequence

Transcript ID

PGSC0003DMT400075424
Transcript Infomation

pacid=37449269 locus=PGSC0003DMG400029336 ID=PGSC0003DMT400075424.v4.03 annot-version=v4.03
Sequence

ATGAAACTCGAGGACTTCTTTACCTTGACTGAGATGAGTAATGGGCTCACAACTCCTTCT
CGAGTCCAGGATCTAGTCTCCATAATGCAGAAGGAAAGAGAGTGTGATGTCAAGAATGCT
GGTGAAACAACAAAGCAGTGGTCTGCTGTTGCAAGCACGATAGCTGCAACTGAGAATAAA
GAATGTCTTGAACTCTTTATCCAGCTAGATGGACTCAGCTTTATTCAGAGTTGGTTACGG
GATGCTCTAAGATTTGGAAATGAGACAGGTGAGTACTTTGTAGATGAATCAATTAGTCAT
TTGATTGATCTTTTACTGCGAGCTGTTGAAAGGCTGCATGTAGATGATAAGAAGTCTGTA
TCTTCTGGAATCTGGCTGACTGTGAAGAGCCTCCTTGGCCACAATAATTCTAAGGTGCAA
GAGAGGGCTAAGACATTATTTGATAGTTGGAATAAAGGGAAAGACGACTGTATGGTTTCA
GTGGGTATTGAAAAAGTACAAGCATCTATTGATGATAAAACAAGAGATACTGCGAATCTC
GTTGGGGAAAATGGGCTGTCTGAACCGTCGTCTGTGGAAGGAGGTTCTGGAGAAGAAAAG
ACCAAGGAACATGTTGGCAATAGTAAGATACTGTCTTCAAGGTCTGATATCCATCAATCT
AGGGTTGGAGATACCGCAACATCCGACCAAAATTTAGAGCATACACACATGAAGGATGCG
TTTCCAGGCTCTTCTTTGTCAAATTCGGTTACTGAAGGTCACAAGGTTGAACACCCGACA
CATCAGGCAGAGTGTGCCACCAATGCTATTGATACGTCAAATACGTGCACTTCTATAGTA
TTGAGACCTGGTCCTGCTGATGAACAGACAGATGTTCCTGTTTCAGATTCAATTAATCAC
TTAAGTCACATTAAAGAAGTCGGAAGTTCTGAGAAATTCAACTCCGCAGTGTCTAAATCA
TTGGAAGACAGAACTATTTCTTTAGTTACTGATATCAGAGAAGCTTTGGATGCTATTGCT
GGATCAGATTTACAAAAACAAACTGATGTCTACAACGAAAAGAGTTGTAGCGGAAATTCT
ACTTTTGGTGATGTCTCAGTGGCTGTTCCCGAGGGAAAGACACCGGTGGATGATAGCAGA
CCTGAAAATCATGGCAGCAGCAAGATAGTGCTTGAAGCTACAGAAAACAGAAAGTGCAAC
AATGACATATTGCAGGACTCCGACAAGCATAATCTGGAACATCCCGTAGATTCTGTTGTT
GATCAGGCTGACAAACACACTAGCGACAACAGTGAGGACAAACACACTAGTGACAACAGT
GAGGATGATATGGAAAATGAAAGTGAATTTCAAGAAGCAGGAAAAGGAGGTAGAGACCAT
GGTGTGTTTGGCAAGAAAAGTGATATTGATTTTGACTATGGCATCATGGATCCTTTAGAA
TTAGCTAGACAAGTTGCAATAGAAGTGGAGAGGGAAGTTCAGAGTTGCAGTTCTTCTGAG
AAAATAGAGGAGAGTAAAGTTCATGAGCCTGGTAGCCCAGATTCTAGTAGTGCAAAACAA
CGCCAAAAAAGGTTCGAGTGCTCTAACAAGGAAGTATCAAGAGGAATGGCTCCTTCGACT
GAAGCTTCACTTGCAAACTCAGAAGCTAGACCAATCAATGGAACTGTGAAGGTGGAATCT
TCTCAGGTTGTTGATGCCACTTTGGATCTTGAAACCAACGTCGACAAAGTTCTGTGCACT
TTTGATCTGAATCTAGAGGTTTGCTCAGATGATATAGATTGCCCAGGAAATCCAATCTCC
AGTTCTGTCTCTGTTGTTTCTGCTTCAAGGGCTGCAGCTGCCTCTGGAGTACCTGCTACT
CCCTTACAGTTTGAAGGAACTCTTGGATGGAAAGGATCCGCTGCAACAAGTGCTTTTCGG
CCTGCATCACCTCGCCGGATTCCTGGAGGTGAGAAGGCTGTTTCCTCTGGCGGGAATGCC
AGCAGCTCAAAGCAAATGCAATGTTTCCATGATATTGATCTGAATGTATCTGAAGGTGGA
GATGATAGGGTTGCAGACCTTTTTCCTGAAAAGAAAGTTTCACTATCATCTGCTCTTCCT
CTAGGGAAATCTTCTCGTGAAGCCAGTCCAAGAAAATCGGAAATGTTAGAGTGGGATCTT
AACTGTGCAAGTGAGGAGGGTGAGGCACCATCTGATTGGCGGATGGAGGGATCACTCTTG
TCTCTGAGGAATGGTCATCCGAGCCAGTCACCTTCATCATCATCATCATCAAAGCAGCCT
TCATTAAGGAACTTTGATCTAAATGACCAGTCATCTTTTCTCAATGATTTCTCAAATCTG
AACAACTTCAAGAAACCACCTCAGAATTCTAATGCATCTGGTGGAATAAAATCAGGTGAT
ACTGTTGTGTCCATCATGGGCGTGAAGGTAGAGGTCAACCGTAAAGATTATGCTGCTCAG
TCTTTTCCTTTTCCAAATGGTAGGGTAGCGGAAAACGCTGTTGAGCATAATGTTGCAAGA
GGTGGAGGAGTTTTAGGAATGGGATCTCCATTTCAATATACCCCTCTTCCTGCTTTTGGT
TACAGTGGCATTGCTCCAGTTCCTCCCATGGCTTTCTCCTCATCAATGTATGGACCCAGT
GGTCATATTCCTTACATGGTGGATTCCAGGGGGGCTCCTGTTGTACCTCAAATTGGCGGA
TCTGCTTCAGCAATACCACCATCTTTCTCCCAACAATCATTCATTTTAAACATGGGAAGT
GCACCTGTTCCCAACGGAGTTTGGCCATCACGAAGTGGTCTGGATCTCGACACTGGCTTA
GTACTTGATCGTGGGAATAAAGACACCGGAGGTCTGAGGCAGCTTTTTGATCAAGGACAA
GCTAGAACGATGGATGAACACTTCAGGATGAACATGCAACCCTCAACCAGTTTGAGTATC
GGTGGGAAACGCAAAGAACCAGATGATGGCTGGGAACCTTCCCCTTTCAAACATCATCCA
CCACCATGGAAGTAA