Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400075398
CDS Infomation

pacid=37446313 polypeptide=PGSC0003DMP400051059 locus=PGSC0003DMG400029325 ID=PGSC0003DMT400075398.v4.03 annot-version=v4.03
Sequence

ATGCCGCTAAAAGGAGAGTTAGCGGTGTTTTTGGTGGCGCTACTTGTTGTGAACACAATA
GCAGAGAGTCCTTATAGATTCTTCGAATGGAATGTTACTTATGGAACGATTTGGCCTCTA
GGCTTACCTCAAAAGGGAATTCTGATTAATGGGCAATTTCCTGGTCCTGATATTCATTCT
GTCACAAATGACAATGTTATTATCAATGTCTTCAACAATTTGGATGAGGATTTTCTTATT
TCATGGAATGGAATACAAAATAGGAGAAACTCATTTGAAGATGGAGTATGGGGAACAACA
TGTCCAATTCCACCTGGGAAGAATTTCACATACATTTTGCAAGTAAAGGATCAAATTGGC
AGCTTTTACTATTTCCCTTCAACTGCATTCCACAAAGCTTCTGGTGGTTTTGGAGGGTTC
AGGATCCTCAGCAGGCCTGGGATTCCTGTTCCTTTCGATGAACCTGCTGGCGATTTCACC
GTCCTTATTGGTGATTGGTACAAGAGCAATCACACGTACTTGAAATCAATACTTGATAGA
AACCACAAGTTGCCTTTTGTTGATGCTCTTCATATCAATGGTATCGGTCCTCAAGGCCCT
AATCGCGCTTCCTTCACAGTTGATCAAGGGAAAACTTATAGACTAAGAATATCAAATGTT
GGATTGGAACATTCACTCAACTTTCGTATCGAAGGACATAAAATGAAATTGGTGGAGGTA
GAAGGAACACATACAATGCAAGAGACATATTCCTCACTCGACGTTCATGTTGGACAATCC
TACTCTGTCCTCATCACAGCTGATCAAACTCCTAAGGACTACTACATTGTTGTTTCAAAT
CGTTTCTCGTCTATTCTCCTTACTACCACCGGTGTACTTCACTACAGCAACTCTAACCAG
GAATTCACTGGCCCGCCCCCTGGTGGTCCAACCATCGAAATTGGTTGGTCCCTCACCCAG
GCCCGTTCTATTAGGACCAACTTGACCGCGAGTGGACCAAGGCCAAACCCTCAAGGATCA
TACCATTATGGTATGATCAACACGACTAGAACTATCAGGCTCGCAAATTCTGCTGGACAA
GTCAATGGCAAGCAAAGATACGCTGTCAACAGTGTGTCCTTTGTGCCAACTAAAAGTGGT
ACTCCTCTCAAGCTTGCTGACTACTTCGACATTGGTGGATTCACCCCCGGAAACATACCT
GATGCCCCCACCAGTAAAGGAATTTACCTCGACACATCTGTTTTGCAAACTGACTACAGG
ACATTCATTGAGATTGTATTCGAGAACAAGGAAGGAATCGTGCAGAGTTGGCATCTTAAC
GGCTATGCCTTTTGGGTAGTAGGCATGGACGGAGGAAACTGGAGTCCGGCTAGTAAGGAC
CAATACAATCTTCGCGATGCAGTTTCAAGAATCACAACTCAGGTGTATCCCAAGTCATGG
ACAGCAATATACATTGCATTAGACAATGTGGGAATGTGGAATCTAAGATCAGAGTTTTGG
GCGCGACAGTATCTAGGACAACAGTTATACATGAGGGTATACACAACATCAACTTCTTTG
CGCGATGAATATCCCATTCCAATCAACGCTCTTCTATGTGGTGATGTGGCTGGTCGACAT
AAAAGACCGCTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400051059
PEP Infomation

pacid=37446313 transcript=PGSC0003DMT400075398 locus=PGSC0003DMG400029325 ID=PGSC0003DMT400075398.v4.03 annot-version=v4.03
Sequence

MPLKGELAVFLVALLVVNTIAESPYRFFEWNVTYGTIWPLGLPQKGILINGQFPGPDIHS
VTNDNVIINVFNNLDEDFLISWNGIQNRRNSFEDGVWGTTCPIPPGKNFTYILQVKDQIG
SFYYFPSTAFHKASGGFGGFRILSRPGIPVPFDEPAGDFTVLIGDWYKSNHTYLKSILDR
NHKLPFVDALHINGIGPQGPNRASFTVDQGKTYRLRISNVGLEHSLNFRIEGHKMKLVEV
EGTHTMQETYSSLDVHVGQSYSVLITADQTPKDYYIVVSNRFSSILLTTTGVLHYSNSNQ
EFTGPPPGGPTIEIGWSLTQARSIRTNLTASGPRPNPQGSYHYGMINTTRTIRLANSAGQ
VNGKQRYAVNSVSFVPTKSGTPLKLADYFDIGGFTPGNIPDAPTSKGIYLDTSVLQTDYR
TFIEIVFENKEGIVQSWHLNGYAFWVVGMDGGNWSPASKDQYNLRDAVSRITTQVYPKSW
TAIYIALDNVGMWNLRSEFWARQYLGQQLYMRVYTTSTSLRDEYPIPINALLCGDVAGRH
KRPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400075398
Transcript Infomation

pacid=37446313 locus=PGSC0003DMG400029325 ID=PGSC0003DMT400075398.v4.03 annot-version=v4.03
Sequence

ATGCCGCTAAAAGGAGAGTTAGCGGTGTTTTTGGTGGCGCTACTTGTTGTGAACACAATA
GCAGAGAGTCCTTATAGATTCTTCGAATGGAATGTTACTTATGGAACGATTTGGCCTCTA
GGCTTACCTCAAAAGGGAATTCTGATTAATGGGCAATTTCCTGGTCCTGATATTCATTCT
GTCACAAATGACAATGTTATTATCAATGTCTTCAACAATTTGGATGAGGATTTTCTTATT
TCATGGAATGGAATACAAAATAGGAGAAACTCATTTGAAGATGGAGTATGGGGAACAACA
TGTCCAATTCCACCTGGGAAGAATTTCACATACATTTTGCAAGTAAAGGATCAAATTGGC
AGCTTTTACTATTTCCCTTCAACTGCATTCCACAAAGCTTCTGGTGGTTTTGGAGGGTTC
AGGATCCTCAGCAGGCCTGGGATTCCTGTTCCTTTCGATGAACCTGCTGGCGATTTCACC
GTCCTTATTGGTGATTGGTACAAGAGCAATCACACGTACTTGAAATCAATACTTGATAGA
AACCACAAGTTGCCTTTTGTTGATGCTCTTCATATCAATGGTATCGGTCCTCAAGGCCCT
AATCGCGCTTCCTTCACAGTTGATCAAGGGAAAACTTATAGACTAAGAATATCAAATGTT
GGATTGGAACATTCACTCAACTTTCGTATCGAAGGACATAAAATGAAATTGGTGGAGGTA
GAAGGAACACATACAATGCAAGAGACATATTCCTCACTCGACGTTCATGTTGGACAATCC
TACTCTGTCCTCATCACAGCTGATCAAACTCCTAAGGACTACTACATTGTTGTTTCAAAT
CGTTTCTCGTCTATTCTCCTTACTACCACCGGTGTACTTCACTACAGCAACTCTAACCAG
GAATTCACTGGCCCGCCCCCTGGTGGTCCAACCATCGAAATTGGTTGGTCCCTCACCCAG
GCCCGTTCTATTAGGACCAACTTGACCGCGAGTGGACCAAGGCCAAACCCTCAAGGATCA
TACCATTATGGTATGATCAACACGACTAGAACTATCAGGCTCGCAAATTCTGCTGGACAA
GTCAATGGCAAGCAAAGATACGCTGTCAACAGTGTGTCCTTTGTGCCAACTAAAAGTGGT
ACTCCTCTCAAGCTTGCTGACTACTTCGACATTGGTGGATTCACCCCCGGAAACATACCT
GATGCCCCCACCAGTAAAGGAATTTACCTCGACACATCTGTTTTGCAAACTGACTACAGG
ACATTCATTGAGATTGTATTCGAGAACAAGGAAGGAATCGTGCAGAGTTGGCATCTTAAC
GGCTATGCCTTTTGGGTAGTAGGCATGGACGGAGGAAACTGGAGTCCGGCTAGTAAGGAC
CAATACAATCTTCGCGATGCAGTTTCAAGAATCACAACTCAGGTGTATCCCAAGTCATGG
ACAGCAATATACATTGCATTAGACAATGTGGGAATGTGGAATCTAAGATCAGAGTTTTGG
GCGCGACAGTATCTAGGACAACAGTTATACATGAGGGTATACACAACATCAACTTCTTTG
CGCGATGAATATCCCATTCCAATCAACGCTCTTCTATGTGGTGATGTGGCTGGTCGACAT
AAAAGACCGCTCTAA